Genomic tRNA Database: Homo sapiens (Hg18 Mar 2006)

tRNAscan-SE Analysis of Homo sapiens (Hg18 Mar 2006)

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>> Genome Seq

tRNA Gene Summary



tRNAs Decoding Standard 20 AA 513
 Selenocysteine tRNAs (TCA) 3
 Possible suppressor tRNAs (CTA,TTA) 3
 tRNAs with undetermined 
 or unknown isotypes 3
 Predicted pseudogenes 109
 Total tRNAs 631
 
 
Intron Summary tRNAs with introns 
 32 Pro 
 AGG 
 1 Arg 
 TCT 
 5 Leu 
 CAA 
 5 Ile 
 TAT 
 5 Tyr 
 ATA 
 1 Tyr 
 GTA 
 13 Cys 
 ACA 
 1 Trp 
 CCA 
 1

Four Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ala AGC 
 29 GGC 
   CGC 
 5 TGC 
 9 43
 Gly ACC 
   GCC 
 15 CCC 
 7 TCC 
 9 31
 Pro AGG 
 10 GGG 
   CGG 
 4 TGG 
 7 21
 Thr AGT 
 10 GGT 
   CGT 
 6 TGT 
 6 22
 Val AAC 
 11 GAC 
   CAC 
 16 TAC 
 5 32  Six Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ser AGA 
 11 GGA 
   CGA 
 4 TGA 
 5 ACT 
   GCT 
 8   
     
   28
 Arg ACG 
 7 GCG 
   CCG 
 5 TCG 
 6   
     
   CCT 
 5 TCT 
 6 29
 Leu AAG 
 12 GAG 
   CAG 
 10 TAG 
 3   
     
   CAA 
 7 TAA 
 7 39
 Two Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Phe AAA 
   GAA 
 12   
     
   12
 Asn ATT 
 1 GTT 
 32   
     
   33
 Lys   
     
   CTT 
 17 TTT 
 17 34
 Asp ATC 
   GTC 
 19   
     
   19
 Glu   
     
   CTC 
 13 TTC 
 13 26
 His ATG 
   GTG 
 11   
     
   11
 Gln   
     
   CTG 
 21 TTG 
 11 32  Two Box & Other tRNA Sets Isotype tRNA Count by Anticodon Total
 Ile AAT 
 14 GAT 
 8   
   TAT 
 5 27
 Met   
     
   CAT 
 20   
   20
 Tyr ATA 
 1 GTA 
 14   
     
   15
 Supres   
     
   CTA 
 1 TTA 
 2 3
 Cys ACA 
   GCA 
 30   
     
   30
 Trp   
     
   CCA 
 9   
   9
 SelCys   
     
     
   TCA 
 3 3

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.