Genomic tRNA Database: Leishmania major (Version 5.0)

tRNAscan-SE Analysis of Leishmania major (Version 5.0)

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>> Genome DB

>> Genome Seq

tRNA Gene Summary



tRNAs Decoding Standard 20 AA 82
 Selenocysteine tRNAs (TCA) 0
 Possible suppressor tRNAs (CTA,TTA) 0
 tRNAs with undetermined 
 or unknown isotypes 0
 Predicted pseudogenes 1
 Total tRNAs 83
 
 
Intron Summary tRNAs with introns 
 3 Tyr 
 GTA 
 3

Four Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ala AGC 
 2 GGC 
   CGC 
 2 TGC 
 1 5
 Gly ACC 
   GCC 
 4 CCC 
 1 TCC 
 1 6
 Pro AGG 
 2 GGG 
   CGG 
 2 TGG 
 1 5
 Thr AGT 
 3 GGT 
   CGT 
 2 TGT 
 1 6
 Val AAC 
 2 GAC 
   CAC 
 2 TAC 
 1 5  Six Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ser AGA 
 1 GGA 
   CGA 
 1 TGA 
 1 ACT 
   GCT 
 2   
     
   5
 Arg ACG 
 4 GCG 
   CCG 
 1 TCG 
 1   
     
   CCT 
 1 TCT 
 1 8
 Leu AAG 
 3 GAG 
   CAG 
 2 TAG 
 1   
     
   CAA 
 1 TAA 
 1 8
 Two Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Phe AAA 
   GAA 
 2   
     
   2
 Asn ATT 
   GTT 
 3   
     
   3
 Lys   
     
   CTT 
 3 TTT 
 1 4
 Asp ATC 
   GTC 
 3   
     
   3
 Glu   
     
   CTC 
 2 TTC 
 1 3
 His ATG 
   GTG 
 2   
     
   2
 Gln   
     
   CTG 
 3 TTG 
 1 4  Two Box & Other tRNA Sets Isotype tRNA Count by Anticodon Total
 Ile AAT 
 3 GAT 
     
   TAT 
 1 4
 Met   
     
   CAT 
 4   
   4
 Tyr ATA 
   GTA 
 3   
     
   3
 Supres   
     
   CTA 
   TTA 
   0
 Cys ACA 
   GCA 
 1   
     
   1
 Trp   
     
   CCA 
 1   
   1
 SelCys   
     
     
   TCA 
   0

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.