Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCCCGGTTGGCATCCGGGAG...........GcCCCGGGTTCAAATCCCGGCCGGTCCACCA tRNA-Ala-GGC-1-1 Sc: 99.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCCGCCCTCGCACGGCGGAG...........GcCCCGGGTTCAAATCCCGGCCGGTCCACCA tRNA-Ala-CGC-1-1 Sc: 103.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCCCGGCTTGCACCCGGGAG...........GcCCCGGGTTCAAATCCCGGCCGGTCCACCA tRNA-Ala-TGC-1-1 Sc: 104.2
Arg tRNAs
>>>>>>>..>>>>..............<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAccA...GAGCGCCGGCCTGCGG............................................AGCCGGAG...........GtCCCGGGTTCAAATCCCGGCGGGCCCGCCA tRNA-Arg-GCG-1-1 Sc: 105.7 >>>>>>>..>>>................<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTTGGGACATTT.GTAt..Tt.A....AGTGCTGGCCTGCGG............................................AGCCGGGGG..........GtCCCGGGTTCAAATCCCGGCCCAGGCC... tRNA-Arg-GCG-2-1 Sc: 27.8 >>>>>>>..>>>>..............<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAt.A...GAGCGCCGGCCTCCGG............................................AGCCGGAG...........GtCCCGGGTTCAAATCCCGGCGGGCCCGCCA tRNA-Arg-CCG-1-1 Sc: 107.9 >>>>>>>..>>>>..............<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAc.A...GAGCGCCGGCCTTCGG............................................AGCCGGCG...........GtCCCGGGTTCAAATCCCGGCGGGCCCGCCA tRNA-Arg-TCG-1-1 Sc: 103.6 >>>>>>>..>>>>..............<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAt.A...GAGCGCCGGCCTCCTA............................................AGCCGGTG...........GtCGGGGGTTCAAATCCCCCCGGGCCCGCCA tRNA-Arg-CCT-1-1 Sc: 106.0 >>>>>>>..>>>>..............<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAc.A...GAGCGCCGGCCTTCTAagcgcggggggtcgggagagcccctgtctctgctgcgcggggaaAGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGGCCCGCCA tRNA-Arg-TCT-1-1 Sc: 95.3
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCTaGGTAGAGCGCCGGGCTGTTAACCCGGTG...........GtCGGGGGTTCAAGTCCCCTCCCCGGCGCCA tRNA-Asn-GTT-1-1 Sc: 98.5
Asp tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.............................................................................................................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTATAGCCtGGActAGTATGCGGGCCTGTCAagggcccgcctccgcccctcttcctccggcacgcgccttagaggataaacgggtgggcaaacgtttttaaccccgacgaaatttatactcttcccggggcggaggcgggcctgcggagAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCGCCA tRNA-Asp-GTC-1-1 Sc: 86.6
Cys tRNAs
>>>>>>>..>>>............<<<.>>>>>.........................<<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGGCCGAGCGGTctA.AGGCGGCGGGCTGCAGaggacctcgcccgtagagACCCGTTA...........GttCCCGGGTTCGAATCCCGGCCCCGGCTCCA tRNA-Cys-GCA-1-1 Sc: 83.3
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTATAGCCcGGCccAGTATGCGGGCCTCTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCACCA tRNA-Glu-CTC-1-1 Sc: 98.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTATAGCCcGGCccAGTATGCGGGCCTTTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCACCA tRNA-Glu-TTC-1-1 Sc: 98.1
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGCccA.GGATGCGGGGCTCTGGCCCCCGTG...........ACCGGGGTTCGAATCCCCGCCCGGCTACCA tRNA-Gln-CTG-1-1 Sc: 87.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGCccA.GGATGCGGGGTTTTGGCCCCCGTG...........ACCCGGGTTCGAATCCCGGCCCGGCTACCA tRNA-Gln-TTG-1-1 Sc: 85.2
Gly tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGActAGGACGCCGGCCTGCCAAGCCGGAG...........GtCCCGGGTTCAAATCCCGGCCGCCGCACCA tRNA-Gly-GCC-1-1 Sc: 103.1 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTCGTCTAGCCtGGActAGGACGCCGGCCTCCCAAGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCGCACCA tRNA-Gly-CCC-1-1 Sc: 102.4 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTCGTCTAGCCtGGActAGGACGCCGGCCTTCCAAGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCGCACCA tRNA-Gly-TCC-1-1 Sc: 101.7
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGGTAGCTCAGCCtGGAtAGAGCGCCGGACTGTGGATCCGGAG...........GtCCCGGGTTCAAATCCCGGCCCGGGCCCCA tRNA-His-GTG-1-1 Sc: 103.5
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCtGGTAGAGCGCCCGGCTGATA......................................ACCGGGAG...........GtCGGGGGTTCGAATCCCCCCGGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 108.6
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGTAGAGCGCCCGGCTCATAccgccgggtctcgggttcgagccaaacccgcgtgagacACCGGGTG...........GtCGGGGGTTCAAATCCCCCCGGGCCCACCA tRNA-Ile2-CAT-1-1 Sc: 100.7
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCtGGCcaAAGGGGTCGGGCTGAGGACCCGATGGCGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-GAG-1-1 Sc: 96.1 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCtGGCcaAAGGGGTCGGGCTCAGGACCCGATGGCGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-CAG-1-1 Sc: 96.7 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCtGGCcaAAGGGGTCGGGCTTAGGACCCGATGGCGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 96.0 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGGcgAAGGGGGCGGGCTCAAGACCCGTTGGCGTAG....GCCGgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-CAA-1-1 Sc: 95.4 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCtGGCcaAAGGGGGCGGGCTTAAGACCCGTTGGCGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-TAA-1-1 Sc: 96.4
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCtGGTAGAGCGGCGGGCTCTTAacccgtagaggggttttgaggggctgcgtcctgg...CCCCGCGGAA.........GtCCCGGGTTCGAATCCCGGCGGGCCCGCCA tRNA-Lys-CTT-1-1 Sc: 108.1 >>>>>>>..>>>>.........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCcGGCAGAGCGGCGGGCTTTTAacccgtagagggggagtgtttaggggctgcgtcctggCCCCGCGGAA.........GtCCCGGGTTCAAATCCCGGCGGGCCCGCCA tRNA-Lys-TTT-1-1 Sc: 106.2
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..........................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCtGGCAGAGCGCCGGACTCATAcggcccggctacaatcactctccaggccgaagtcgcctgggggcctgggagATCCGGAG...........GtCCCGGGTTCGAATCCCGGCGGCGGCACCA tRNA-Met-CAT-1-1 Sc: 99.8
iMet tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTAGGGTAGCCtGGCAGCCCGCGGGGCTCATAACCCCGAG...........GtCGGTGGTTCAAATCCACCCCCCGCTACCA tRNA-iMet-CAT-1-1 Sc: 98.9
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCGGGA.GAGCGCCCGGCTGAAGACCGGGTG...........GtCCGGGGTTCGAATCCCCGCGGCGGCACCA tRNA-Phe-GAA-1-1 Sc: 100.1
Pro tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTCGTCTAGCCtGGCtAGGATGCCAGCCTGGGGagcgcatccccacccccgcgtcgggggcgcccggat........CGCTGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCCCACCA tRNA-Pro-GGG-1-1 Sc: 81.2 >>>>>>>..>>>>..........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGCtAGGATGCGGGGTACGGAgcagaaggtcccgctggggggcgggaggctccgcccgactcgggACCCCGTG...........GtCCGGGGTTCAAATCCCCGCGGGCCCACCA tRNA-Pro-CGG-1-1 Sc: 75.0 >>>>>>>..>>>>..........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTCGTCTAGCCtGGCtAGGATGCGGGGCTTGGG............................................ACCCCGTG...........GtCCGGGGTTCAAATCCCCGCGGCCCCACCA tRNA-Pro-TGG-1-1 Sc: 97.7
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>..........................................<<<<<..>>>>>.......<<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGTccA.AGGGGACGGGCTGGAG...................................ACCCGTT.GCCCCGCGA...GGGGCGCGCGGGTTCGAATCCCGC.CCCCGGCGCCA tRNA-Ser-GGA-1-1 Sc: 87.3 >>>>>>>..>>>..............<<<.>>>>>..........................................<<<<<...>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGCCGAGC..GGCccA.AGGCGGCGGGCTCGAGgtcggcacaggggtttccgcgccgccgcacgagagACCCGTTGCCCCAGGAG....GGGCGCGCGGGTTCGAATCCCGC.CCCCGGCGCCA tRNA-Ser-CGA-1-1 Sc: 69.2 >>>>>>>..>>>..............<<<.>>>>>..........................................<<<<<..>>>>>.......<<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGCCGAGC..GGCccA.AGGCGGCGGGCTTGAG...................................ACCCGTT.GCCCCGCGA...GGGGCGCGCGGGTTCGAATCCCGC.CCCCGGCGCCA tRNA-Ser-TGA-1-1 Sc: 87.9 >>>>>>>..>>>>............<<<<.>>>>>..........................................<<<<<..>>>...........<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGCGGTCGCCTAGCCtGGCc.A.GGGCGCCGGCCTGCTA...................................AGCCGGTGGGG..GAGAc....CCCGCGCGGGTTCAAATCCCGC.CCGCGGCGCCA tRNA-Ser-GCT-1-1 Sc: 94.1
Thr tRNAs
>>>>>>>..>>>>............................<<<<.>>>>>....................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCTGGCA....................GAGCGCCGCCCTGGTA.............................................AGGCGGAG...........GcCCCGGGTTCGAATCCCGGCGGCGGCTCCA tRNA-Thr-GGT-1-1 Sc: 98.3 >>>>>>>..>>>>............................<<<<.>>>>>....................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGC.GGTA....................GAGCGCCGGCCTCGTAcgggtgtgcaccgaggtcgcctccacctggtggagcctccgggaaAGCCGGTG...........GtCGCGGGTTCGAATCCCGCCGGCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 94.1 >>>>>>>..>>>..............................<<<.>>>>>....................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCAGGCAgacccctgcgcggggccta.AAGCGCCGGCCTTGTA.............................................AGCCGGTG...........GtCGCGGGTTCGAATCCCGCCGGCGGCTCCA tRNA-Thr-TGT-1-1 Sc: 98.5
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>............................................<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGCAGAGCGGCGGACCCCGcataggcccccactagcgggaggccgaggctccagA.CCCGTAG...........GtCGGGGGTTCAAATCCCCCCGGGCCCACCA tRNA-Trp-CCA-1-1 Sc: 105.6
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..............................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCGCCGTAGCTCAGCGGCA.GAGCGCCCGGCTGTAGtgggacacgggcggagtaacccggtgtctccccgcagacACCGGGTG...........GtCCGGGGTTCGAATCCCCGCGGCGGGACCA tRNA-Tyr-GTA-1-1 Sc: 87.5
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTGACGCGGCGGAG...........GtCCGGGGTTCAAATCCCCGCGGGCCCACCA tRNA-Val-GAC-1-1 Sc: 98.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTCACACGGCGGAG...........GtCCGGGGTTCAAATCCCCGCGGGCCCACCA tRNA-Val-CAC-1-1 Sc: 98.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTTACACGGCGGAG...........GtCCGGGGTTCAAATCCCCGCGGGCCCACCA tRNA-Val-TAC-1-1 Sc: 97.9
SeC tRNAs
Sup tRNAs