Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGATCAGTCtGGAAGATCGCCCGCTTGGCGTGCGGGAG...........GtCCTGGGTTCAAATCCCAGCCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 84.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGATCAGTCtGGAAGATCGTCCGCCTCGCACGCGGAAG...........GtCCGGGGTTCAAATCCCCGCCGGTCCA... tRNA-Ala-CGC-1-1 Sc: 86.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGATCAGTCtGGAAGATCGTCCGCCTTGCACGCGGAAG...........GtCCGGGGTTCAAATCCCCGCCGGTCCA... tRNA-Ala-TGC-1-1 Sc: 86.2
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<..<<<<<<<.... GGGCCCGTGGCCTAGAAtGGAtAGGGCGTCGGCCTGCGG...................................AGCCGGAG...........GtCGTGGGTTCAAGTCCCAC..CGGGCCCG... tRNA-Arg-GCG-1-1 Sc: 80.5 >>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<..................>>>.......<<<....<<<<<<<.... GGGCCCGTAGCTTAGCAtGGAtAGAGCGCTGGCCTCCGGagccagaggtcgtgagcggcggtacggaagtgccgCGCCGGC............A....GGGTTCAAATCCCAC..CGGGCCCG... tRNA-Arg-CCG-1-1 Sc: 94.4 >>>>>>>..>>>>..........<<<<..>>>>..........................................<<<<.................>>>>>.......<<<<<..<<<<<<<.... GGGCCCGTGGCGCAGAAtGGAtAGCGCGGCGGCCTTCGG...................................AGCCGGAG...........GtCGTGGGTTCAAGTCCCAC..CGGGCCCG... tRNA-Arg-TCG-1-1 Sc: 77.3 >>>>>>>..>>>>..........<<<<.>>>>............................................<<<<..................>>>.......<<<....<<<<<<<.... GGGCCCGTGGCGCAGAAtGGAtAGCGCGGCGGCCTCCTAagccgtaggtcgtgagcagaggcacagaagtg...CTCCGCCG...........At..AGGGTTCAAGTCCCAC..CGGGCCCG... tRNA-Arg-CCT-1-1 Sc: 84.0 >>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<..<<<<<<<.... GGGCCCGTGGCGCAGAAtGGAtAGCGCACCGGCCTTCTA...................................AGTCGGGG...........GtCGTGGGTTCAAGTCCCAC..CGGGCCCG... tRNA-Arg-TCT-1-1 Sc: 73.6
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCCtGGTAGAGCGGCGGGCTGTTAACCCGTCG...........GtCAGCGGTTCAAATCCGCTCCCCGGCG... tRNA-Asn-GTT-1-1 Sc: 91.4
Asp tRNAs
>>>>>>>..>>.>..........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCCAGGTGGTATAGCCaGGTtAGCATCGCCGGCTGTCGCCCGGCGG...........ACCCGGGTTCAAATCCCGGCCTGGGCG... tRNA-Asp-GTC-1-1 Sc: 77.3
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGGCCGAGCAGCG.AGGCGGCGGCCTGCAGAGCCGCTT...........TaCAGGGGTGCAAATCCCCTCCCCGGCT... tRNA-Cys-GCA-1-1 Sc: 55.5
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCCGGTAGTATAGTCcGGTcaAGTATGCGGGCCTCTCGAGCCCGAG...........ACCCGGGTTCAAATCCCGGCCGGAGCA... tRNA-Glu-CTC-1-1 Sc: 90.4 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCCGGTAGTATAGTCcGGTcaAGTATACCGGCCTTTCGAGCCGGTG...........ACCCGGGTTCAAATCCCGGCCGGAGCA... tRNA-Glu-TTC-1-1 Sc: 86.3
Gln tRNAs
>>>>>>>..>>.>..........<.<<.>.>>.....................................................<<.<................>>>>>.......<<<<<.<<<<<<<.... AGCCCGGTCGTCTAGCGGC..C.AAAC.CTGGTCAGAAGagggccatggatctcgggctctggatcactcctctgtgaggagaACCCCGAG...........GaCGCCGGTTCGAATCCGGC.CCGGGCTA... tRNA-Gln-CTG-1-1 Sc: 64.2 >>>>>>>..>>>>..........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<.<<<<<<<.... AGCCCCGTCGTCTAGCGGCcaA.GGATGCGGGCCTTTGG............................................AGCCCGCG...........A.CGTGGGTTCAAATCCCAC.CGGGGCTA... tRNA-Gln-TTG-1-1 Sc: 81.9
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGTAGGACACCAGCCTGCCACGCTGGGA...........GtCGCGGGTTCAAATCCCGCCCGCCGCA... tRNA-Gly-GCC-1-1 Sc: 84.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGCCaGGTAGGACGGCGGGGCCCCGGCCCGCAG...........GtCCCGGGTTCAAATCCCGGCGGCCGCA... tRNA-Gly-CCC-1-1 Sc: 83.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTGGTCTAGCCtGGTAGGACACCAGCCTTCCACGCTGGTA...........GtCGCGGGTTCAAATCCCGCCGGCCGCA... tRNA-Gly-TCC-1-1 Sc: 89.1
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGAGGTGGGGTAGCCtGGTAGCCCTCAGGGCTGTGGACCCTGCA...........GCGCGAGTTCGAATCTCGCCCTCGGCC... tRNA-His-GTG-1-1 Sc: 75.2
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCAtGGTtAGAGCGTTCGGCTGATAACCGAAAG...........GtCGGGAGTTCGAATCTCCCCCGGCCCA... tRNA-Ile-GAT-1-1 Sc: 88.7
Ile2 tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGTtAGAGCGCCAGGCTCATAACCTGGTG...........GcCGTGGGTTCGAATCCCACCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 98.6
Leu tRNAs
>>>>>>>..>>>......................................................<<<.>>>>>.................................................................<<<<<.>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTCGCCAAGCCtGGTca.........A................................CGGCGCAGGACTGAGG..........................................................CTCCTGTCCCGAAG.......GGGTtCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-GAG-1-1 Sc: 83.3 >>>>>>>..>>>......................................................<<<.>>>>>.................................................................<<<<<.>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTCGCCAAGCCtGGTca.........A................................CGGCGCAGGGTTCAGG..........................................................CCCCTGTCCCGAAG.......GGGTtCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-CAG-1-1 Sc: 82.2 >>>>>>>..>>>......................................................<<<.>>>>>.................................................................<<<<<.>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTTGCCAAGCCtGGTc..........AaattttctcagcaaaagctgagagaaaaccagCGGCGCAGGGCTTAGG..........................................................ACCCTGTCCCGAAG.......GGGTtCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-TAG-1-1 Sc: 86.9 >>>>>>>..>>>......................................................<<<.>>>>>.................................................................<<<<<.>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTAGCCAAGCCtGGTcaaacccatccAgcagaagctggacagaaccaa...........CGGCGGCAGGCTCAAG..........................................................ACCTGCTCCCGCAG.......GGGTtCGTGGGTTCGAATCCCAC.CCCCCGCA... tRNA-Leu-CAA-1-1 Sc: 84.7 >>>>>>>...>........................................................<...>>>...................................................................<<<......................>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTAGCCAAGTCtGGTc..........A................................AAGAGGCCCACAAACAtccacgagggccgtgaaagcggcgggcttaagatcacgtgagtggaaacccgctcccgAAGGGGT.................T.CGTGGGTTCGAATCCCAC.CCCCCGCA... tRNA-Leu-TAA-1-1 Sc: 81.6
Lys tRNAs
>>>>>>>..>>>....................................<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGCTCAGTCaGGT.AgagagaaccatctaacggttcctaTAGCGGCCGGCTCTTAACCGGCAG...........GtCGCGGGATCAAAGCCCGCTGGGCCCG... tRNA-Lys-CTT-1-1 Sc: 82.1 >>>>>>>..>>>>..................................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAcA........................GAGCACCGGGCTTTTAACCCGGGG...........GcCGCGGGTTCAAATCCCGCCGGGCCCG... tRNA-Lys-TTT-1-1 Sc: 95.1
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAACTCAGCCtGGCcAGAGTGCGGGGCTCATAATCCCGTT...........GcCGTGGGTTCGAATCCCACCCCCGGCA... tRNA-Met-CAT-1-1 Sc: 84.3
iMet tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTAGGGTAGCCaGGTtAACCCGCCGGGCTCATAACCCGGAG...........AtCGGTGGTTCAAGTCCACCCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 88.0
Phe tRNAs
>>>>>>>...>>>.........<<<.......................>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCGGTAGCTCAGACtGGGAGAGAGaaacaaaagtttcctccaacgCCCGGCTGAAGACCGGGAT...........GtCGGCGGTTCAAGTCCGCCCCGGGGCA... tRNA-Phe-GAA-1-1 Sc: 84.3
Pro tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTGGTCTAGCTtGGTctAAGACTCCAGCCTGGGGCGCTGGCA...........AtCCTGGGTTCAAATCCCAGCGGCCCCA... tRNA-Pro-GGG-1-1 Sc: 78.3 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTGGTCCAGCTtGGTctAAGATGCGCGGCTCGGGCCCGCGAG...........GtCGTGGGTTCAAATCCCACCGGCCCCA... tRNA-Pro-CGG-1-1 Sc: 87.8 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTGGTCCAGCTtGGTctAAGATGCGCGGCTTGGGCCCGCGAG...........GtCGTGGGTTCAAATCCCACCGGCCCCA... tRNA-Pro-TGG-1-1 Sc: 87.0
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.............................<<<<<..>.>>>............<<<.<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTCCCTCAGCCaGGT.AGAGGGCAGGCCTGGAG......................AGCCTGTGGCCCTAA........CCGGGCCG.CGTGGGTTCAAATCCCAC.CCCCGGCG... tRNA-Ser-GGA-1-1 Sc: 90.5 >>>>>>>..>>>>..........<<<<.>>>>>.............................<<<<<..>>>>>............<<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTCCCACAGCCaGGC.AGTGGGCCGGCCTCGAGatcataaaaagctggtcaagaaAGCCGGT.GGCCT..TTCC......GGGCCG.CGTGGGTTCAAATCCCAC.CCCCGGCG... tRNA-Ser-CGA-1-1 Sc: 75.4 >>>>>>>..>>>............<<<.>>>>>.............................<<<<<..>>>................<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTACCCAAGCCaGGAtAAGGGGCGGGCCTTGAGacaagacatgaa..........AGCCCGTGGCC....ACACa.......GGCCtCGTGGGTTCAAATCCCAC.CCCCGGCG... tRNA-Ser-TGA-1-1 Sc: 76.1 >>>>>>>..>>>>..........<<<<.>>>>>.............................<<<<<..>.>................<.<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTCCCCAAGCCtGGT.ATGGGGCTGGTCTGCTA......................AACCAGTGGCC....TTTG........GCCG.CGCGGGTTCAAATCCCGC.CCCCGGCG... tRNA-Ser-GCT-1-1 Sc: 83.5
Thr tRNAs
>>>>>>>...>>>.........<<<..>.>>............................................................<<.<.................>>>>>.......<<<<<<<<<<<<.... GCCCTGGTAGCTCAGACtGGGAGAGAGG.GCAATGTCGctacatagcctctcaaacgaccgcttggtaagcggtagagcctcgccgaagAGGCGCCGAC..........GtCCGGGGTTCAAAGCCCCGCCAGGGCT... tRNA-Thr-GGT-1-1 Sc: 78.0 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................<<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCCTGGTAGCTCAGCCcGGTAGAGCGGCCGCCTCGTA...................................................AGCGGCAG............GtCGAGGGTTCAAAGCCCTCCCAGGGCT... tRNA-Thr-CGT-1-1 Sc: 88.2 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................<<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCCTGGTAGCTCAGCCcGGTAGAGCGGCCGCCTTGTA...................................................AGCGGCAG............GtCGAGGGTTCAAAGCCCTCCCAGGGCT... tRNA-Thr-TGT-1-1 Sc: 87.5
Trp tRNAs
>>>>>>>..>>>............<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGGCGTAGCCGAGCAaGGCcAAGGCGTCGGGCTCCAGatcaaaacagctggtcaagaggcgacACCCGAAG...........AcCGTGGGTTCAAGTCCCACCGCCCCCA... tRNA-Trp-CCA-1-1 Sc: 79.6
Tyr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCGCGGTAGCTCAGCCtGGTAGAGCGCCCGGCTGTAGcggccagccccgcggctgagccgatgttcagcccgccaggctacatggaaACCGGGTG...........GtCGCAGGTTCAAATCCTGCCCGCGGGACCA tRNA-Tyr-GTA-1-1 Sc: 90.5
Val tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTCTAGCCtGGTATGACGCCACCCTGACGCGGTGGAG...........GtCGGCGGTTCAAGTCCGCCCCGGCCCA... tRNA-Val-GAC-1-1 Sc: 86.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTCTAGCCtGGTAGGACGCCGCCCTCACACGGCGGAG...........GtCGGCGGTTCAAGTCCGCCCCGGCCCA... tRNA-Val-CAC-1-1 Sc: 90.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTCTAGCCtGGTAGGACGCTGCTCTTACGAAGCAGAG...........GtCGGCGGTTCAAGTCCGCCCCGGCCCA... tRNA-Val-TAC-1-1 Sc: 86.3
SeC tRNAs
Sup tRNAs