Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGCGCAGTTGGTAGCGCGCCCGCTTGGCATGCGGGAG...........GtCGGGGGTTCGAATCCCCCCCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 82.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGCGCAGTTGGTAGCGCGCCGCCTTCGCAAGGCGGAG...........GcCGCGGGTTCGAATCCCGCCCGGTCCA... tRNA-Ala-CGC-1-1 Sc: 87.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGGCGGTAGAGCGCCGGCTTTGCAAGCCGGAG...........GcCGCGGGTTCGAGTCCCGCCGGGTCCA... tRNA-Ala-TGC-1-1 Sc: 86.6
Arg tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCAaGGAtcAGAGCGTCGGCCTGCGGAGCCGAAG...........GtCGCGGGTTCGAGTCCCGCCGGGCCCG... tRNA-Arg-GCG-1-1 Sc: 88.7 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCAtGGTc.AGAGCGTCGGCCTCCGGAGCCGAAG...........GtCGCGGGTTCGAGTCCCGCCGGGCCCG... tRNA-Arg-CCG-1-1 Sc: 90.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCAaGGAt.AGAGCGGCGGCCTTCGGAGCCGCAG...........GtCGAGGGTTCAAGTCCCTCCGGGCCCG... tRNA-Arg-TCG-1-1 Sc: 86.9 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCAaGGAt.AGAGCGGCGGCCTCCTAAGCCGCAG...........GcCGAGGGTTCGAGTCCCTCCGGGCCCGCCA tRNA-Arg-CCT-1-1 Sc: 93.0 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCAaGGAt.AGAGCGGCGGCCTTCTAAGCCGCAG...........GcCGAGGGTTCAAGTCCCTCCGGGCCCG... tRNA-Arg-TCT-1-1 Sc: 87.6
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGGGTAGCTCAGCCaGGTAGAGCATCCGGCTGTTAACCGGAGG...........GtCGTGGGTTCGAGTCCCACCCCCGCCG... tRNA-Asn-GTT-1-1 Sc: 87.6
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCCGGGTGGTGTAGCCcGGCcAGCATAGGGGCCTGTCGAGCCCCAG...........ACCCGGGTTCAAATCCCGGCCCGGGCGCCA tRNA-Asp-GTC-1-1 Sc: 93.1
Cys tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGGGTTGGCCGAGCGGCaT.AGGCAGCGGGCTGCAGACCCGTGG...........ACGGGGGTTCGAATCCCCCACCCGGCT... tRNA-Cys-GCA-1-1 Sc: 72.9
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCCGGTGGTGTAGCCcGGTcaAGCATAGGGGCCTCTCGAGCCCCAG...........ACCCGGGTTCAAATCCCGGCCGGAGCA... tRNA-Glu-CTC-1-1 Sc: 88.4 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCCGGTGGTGTAGCCcGGTcaAGCATAGGGGCCTTTCGAGCCCCAG...........ACCCGGGTTCAAATCCCGGCCGGAGCACCA tRNA-Glu-TTC-1-1 Sc: 93.4
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCCGTGGTGTAGCGGCcaA.GCACGCCGGGCTCTGGACCCGGAG...........ACCCCGGTTCGAATCCGGGCGGGGCTA... tRNA-Gln-CTG-1-1 Sc: 87.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCCGTGGTGTAGCGGCcaA.GCACGCCGGGCTTTGGACCCGGAG...........ACCCCGGTTCGAATCCGGGCGGGGCTA... tRNA-Gln-TTG-1-1 Sc: 87.1
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGCCtGGAcAGGATGGGGGCCTGCCACGTCCCAG...........ACCCGGGTTCAAATCCCGGCGGCCGCA... tRNA-Gly-GCC-1-1 Sc: 86.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGCCtGGAcAGGATGCCGGCCCCCCAAGCCGGCG...........ACCCGGGTTCAAATCCCGGCGGCCGCA... tRNA-Gly-CCC-1-1 Sc: 88.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGCCtGGAcAGGATGCTGGCCCTCCAAGCCGGAG...........ACCCGGGTTCAAATCCCGGCGGCCGCA... tRNA-Gly-TCC-1-1 Sc: 85.9
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGAGGTAGCCtGGTAACCTGGGGGCCTGTGGAGCCCTTA...........ACCCGGGTTCAAATCCCGGCCCCGGCC... tRNA-His-GTG-1-1 Sc: 82.7
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTGGCTCAGACtGGTcAGAGCGCCCGGCTGATA................................ACCGGGAG...........GcCGGGGGTTCAAGTCCCCCCGGGCCCA... tRNA-Ile-GAT-1-1 Sc: 92.4 >>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTGGCTCAGACtGGAtAGAGCGCCTGCCTTATAtggcggctcccgctacagagcgccaggggaaaAGCGGGAG...........GtCGGGGGTTCAAGTCCCCCCGGGCCCA... tRNA-Ile-TAT-1-1 Sc: 84.5
Ile2 tRNAs
Leu tRNAs
>>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTAGCCAAGCCaGGTcc.A.AGGCGCCCGCTTGAGGGGCGGGTGGGCGTCAg....GCCCgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-GAG-1-1 Sc: 88.7 >>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTTGCCGAGCCaGGTcc.A.AGGCGCCGGATTCAGGGTCCGGTGGGCGTCAg....GCCCgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-CAG-1-1 Sc: 88.0 >>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGGCCGAGA..GGTcc.A.AGGCGCCAGCCTTAGGAGCTGGTGAGCATCAg....GCTCgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-TAG-1-1 Sc: 81.4 >>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGGCCGAGCCaGGTtc.A.AGGCGACGGACTCAAGATCCGTTGGGCGTCAg....GCCCtCGTGGGTTCGAATCCCAC.CCCCCGCA... tRNA-Leu-CAA-1-1 Sc: 92.9 >>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGGCCGAGCC.GGGacaA.AGGCGGCGGACTTAAGATCCGCT.CCCTTAG.....GGGTtCGTGGGTTCGAATCCCAC.CCCCCGCA... tRNA-Leu-TAA-1-1 Sc: 90.6
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGAAtGGTAGAGCACCCGGCTCTTAACCGGGGG...........GtCGGGGGTTCGAAGCCCCCCGGGCCCG... tRNA-Lys-CTT-1-1 Sc: 81.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGAAtGGAAGAGCACCCGGCTTTTAACCGGGGG...........GtCGCGGGTTCAAATCCCGCCGGGCCCG... tRNA-Lys-TTT-1-1 Sc: 87.3
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCCtGGTtTGAGCGCCGGACTCATAagtgggcagggccccggcgccgctgggatATCCGGAG...........GtCCCGGGTTCAAATCCCGGCCCCGGCA... tRNA-Met-CAT-1-1 Sc: 91.8
iMet tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTGGGGCAGCCtGGTAGCCCGCCGGGCTCATAACCCGGAG...........GtCGGAGGTTCGAATCCTCCCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 92.6
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGAGGGA.GAGCGTCCGGCTGAAGACCGGAAG...........GtCGAGGGTTCAAATCCCTCCCCCGGCA... tRNA-Phe-GAA-1-1 Sc: 86.5
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTGGTCTAGCTaGGTAGGATGCCAGCCTGGGGCGCTGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCCCA... tRNA-Pro-GGG-1-1 Sc: 93.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTGGTCTAGCTaGGTAGGATGCCGGCCTCGGGAGCCGGAG...........GtCCCGGGTTCAAATCCCGGCGGCCCCA... tRNA-Pro-CGG-1-1 Sc: 100.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTGGTCTAGCTaGGTAGGATGCCGGCCTTGGGAGCCGGAG...........GtCCCGGGTTCAAATCCCGGCGGCCCCA... tRNA-Pro-TGG-1-1 Sc: 99.7
Ser tRNAs
>>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<..>.>>.........<<.<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGCCCTAGCCcG..GA..A...............GGGGGCTGGCCTGGAGAGCCAGTGGCCCAC.....TGGGCCG.CGTGGGTTCAAATCCCACCCCCGGCGCCA tRNA-Ser-GGA-1-1 Sc: 97.8 >>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<..>>>>.........<<<<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTACCCTAGCCaGagGGccAgctaccggctaagaaAGGGGCCGGACTCGAGATCCGGTGGCCTC.......CGGGCCtCGTGGGTTCAAATCCCACCCCCGGCG... tRNA-Ser-CGA-1-1 Sc: 92.1 >>>>>>>..>>>..............................<<<.>>>>>.......<<<<<..>.>>>.......<<<.<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGGCCGAGATcG..GAccA...............AGGTGCCCGCCTTGAGAGCGGGTGGCCCTC.....CGGGCCG.CGAGGGTTCAAATCCCTCCCCCGGCG... tRNA-Ser-TGA-1-1 Sc: 84.7 >>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<..>.>>.........<<.<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGCCCTAGCTcG..GT..A...............GGGGGCTGGCCTGCTAAGCCAGTGGCCCAC.....TGGGCCG.CGAGGGTTCAAATCCCTCCCCCGGCGCCA tRNA-Ser-GCT-1-1 Sc: 96.8
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCGGTAGCTCAGCCcGGTcGGAGCGCCGCCTTGGTAAGGCGGAG...........GgCGCGGGTTCGAATCCCGCCCGGGGCT... tRNA-Thr-GGT-1-1 Sc: 90.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCGGTAGCTCAGCTcGGTcAGAGCGGCCGCCTCGTAAGCGGCAG...........GtCGCGGGTTCGAATCCCGCCCGGGGCT... tRNA-Thr-CGT-1-1 Sc: 95.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCGGTAGCTCAGTC.GGC.AGAGCGGCCGCCTTGTAAGCGGCAG...........GcCGGGGGTTCGAGACCCCCCCGGGGCT... tRNA-Thr-TGT-1-1 Sc: 77.1
Trp tRNAs
>>>>>>>..>.>...................<.<.>>.>>...........................................................<<.<<...............>>>>>.......<<<<<<<<<<<<.... GGGGCCGTGGCCCAGCCtGGCgtccccctATGATATAGGGGTCATGccctggaaaggtagggcggcgggctccagtccctggagcattgagggggacaCCCGTAAG...........ACGTGGGTTCGAGTCCCACCGGCCCCACCA tRNA-Trp-CCA-1-1 Sc: 90.2
Tyr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCGTAGCTCAGCCtGGTAGAGCGGCCGGCTGTAGtgggcgtctattgacgctccgtcagcggcagctcccacagaaACCGGCAG...........GcCGGGGGTTCGAGTCCCCCCGCCCCGA... tRNA-Tyr-GTA-1-1 Sc: 81.0
Val tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTCTAGTGGCtA.TGACGCCGCCTTGACGAGGCGGAG...........GcCGTGGGTTCGAGTCCCACCCGGCCCACCA tRNA-Val-GAC-1-1 Sc: 88.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTCTAGAGGCtA.TGACGCCGCCCTCACACGGCGGAG...........GtCGTGGGTTCGAGTCCCACCCGGCCCA... tRNA-Val-CAC-1-1 Sc: 80.9 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTCTAGAGGCtA.TGACGCCGCCCTTACGAGGCGGAG...........GtCGGGGGTTCGATTCCCCCCCGGCCCA... tRNA-Val-TAC-1-1 Sc: 82.9
SeC tRNAs
Sup tRNAs