Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTCGTCTAGTCtGGTA.GGATAGGTGCATGGCATGCATCGG...........AtCAAGGGTTCAAATCCCTTCCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 57.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGATTTAGG..GGTA.TAATGCCTCGTTCGCAACGAGGAT...........GtCGAGGGTTCGATTCTCTCCCGGTCCACCA tRNA-Ala-CGC-1-1 Sc: 66.4 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGTATAGCCtGGTA.GTATACCCGCCTTGCACGCGGGGG...........GtCACGGATTCAAATTCCGTCCGGTCCA... tRNA-Ala-TGC-1-1 Sc: 76.0
Arg tRNAs
>>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACTCGTTGCATAG..................CTtGGAtAGTGCGATTGCTTGCGGAGCAATAG...........GtCGCCGGTTCGAATCCGGTCGGGTCCG... tRNA-Arg-GCG-1-1 Sc: 65.3 >>.>>>>..>>>>............................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<.<<.... GGACTCGTTGCACAG..................CCtGGAtAGTGCGAGCGGCTTCGAACCGCTAG...........GtCGAGGGATCGAAGCCCTCCGAGCCCT... tRNA-Arg-TCG-1-1 Sc: 55.7 >>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTTGTGGCGCAGagtcattttgacgcgcaaCAtGGAtAGCGCAGTAGCCTCCTAAGTTACAG...........GtCGAGGGATCGAAGCCCTCCAAGCCCG... tRNA-Arg-CCT-1-1 Sc: 55.0 >>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAG..................CAtGGAtAGAGTGTTGGACTTCTAATCCAATG...........GtCAAGGGATCGAAGCCCTTTGGGCCCA... tRNA-Arg-TCT-1-1 Sc: 63.1
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCCCTAGCTCAGCGtGGTAGAGCAACCGGCTGTTAACCGGTTG...........GtCACCAGTTCAAGTCTGGTGGGAGGCG... tRNA-Asn-GTT-1-1 Sc: 61.6
Asp tRNAs
>>>>>>>..>>.>...........<.<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<.... GCCCTTGTAGTATAGCCcGGTctAGAATTCGGCCCTGTCACGGCTGAG...........ACGCGTGTTCAAATCCCGCCGAGGGCGCCA tRNA-Asp-GTC-1-1 Sc: 58.3
Cys tRNAs
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......................<<<<<<<<<<<<.... GCTCCTATAGTGTAGTCcGGTtaAGCATTTTGGCTTCTCAAGCCAAAG...........A.CTCGGGTTCAAA................TCCCGATGGGAGCA... tRNA-Glu-CTC-1-1 Sc: 71.7 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......................<<<<<<<<<<<<.... GTTCCAGTGGTGTAGACcGGTcaAGCATACTGCCCTTTCAAGGCAGTG...........AtCCCGGGTTCAAAatcaatcgatgaaaat.CCCGGCTGGAGCACCA tRNA-Glu-TTC-1-1 Sc: 80.1
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGATAGTCTAGCGGTcaA.GGATTCTGCCCTCTGGatctcaagagtggatAGGCGGAG...........ACGGCAGTTCGAATCTGCCTCGGGCTA... tRNA-Gln-CTG-1-1 Sc: 61.3 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGGTAGTGTAGCGGTcaA.GCATAGAGGCCTTTGA...............AGCCTTTG...........ACCCCAGTTCGAGTCTGGGCCGGGCTA... tRNA-Gln-TTG-1-1 Sc: 71.5
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCAGTTATAGTACAGTCtGGTtAGTACTCGTGCTTGCCAAGTACGTG...........A.CCCGGGTTCAAATCCCGGTAACTGCACCA tRNA-Gly-GCC-1-1 Sc: 69.1 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGAGTTAGTTTAGTCtGGT.ATGACGTCAGCTTCCCAAGCTGAAG...........GcCGCGGGTTCAAATCCCGCACTCCGCA... tRNA-Gly-CCC-1-1 Sc: 79.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCAGTCATAGTATAGCCtGGTtAGTATTCGGGGTTTCCAACCCTGTG...........A.CGCGGGTTCGAATCCCGCTGACTGCA... tRNA-Gly-TCC-1-1 Sc: 71.0
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<.... GCCTTCGTAGTACAGTGGTtA.GTATAGAGGATTGTGGATCCTCGG...........ACAGGAGTTCGATTCCCCTCGAGGGCC... tRNA-His-GTG-1-1 Sc: 40.9
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGCTCAGCTtGGCtGGAGCGTTCGACTGATAATCGAAAG...........GtCATGTGTTCGAATCACATCGGGCCCA... tRNA-Ile-GAT-1-1 Sc: 72.6
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAACTCAGCTtGGTAGAGTAACCGGCTCATAACCGGTGA...........GcCAAGGGATCGAAGCCCTTCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 63.8
Leu tRNAs
>>>>>>>..>>>..............<<<......>>>>>...............................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGCGTCGCCCAGCCtGGCca.AAGGCG.....CTAGCTTGAGG........................................GGCTAGT.CTCTCAG.......GAGTtCGTGGGTTCAAATCCCAT.CGCCCGCA... tRNA-Leu-GAG-1-1 Sc: 71.0 >>>>>>>..>>>..............<<<......>>>>>...............................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTCACCCAGCCtGGTca.ACGGTG.....TAAGGTTCAGA........................................TCCTTATCTTC.TAG.......GAGTtCGTGGGTTCAAATCCCAC.TTCCCGCA... tRNA-Leu-CAG-1-1 Sc: 57.3 >>>>>>>..>>>..............<<<......>>>>>...............................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTCGCCCAGCCtGGTca.AAGGCG.....TAGGGCTTAGG........................................ACCCTAT.CTCTTAG.......GAGTtCGTGGGTTCAAATCCCAC.CTCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 84.3 >>>>>>>..>>>..............<<<......>>>>>...............................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCAGAGGTATCGAAGCCcGGTca.ACCGAG.....AGGGACTCAAGatcttcataataggaa........................ATCCCTT.CTCTCAG.......GAGTtCGTGGGTTCAAATCCCAC.CCTCTGCA... tRNA-Leu-CAA-1-1 Sc: 66.5 >>>>>>>...>................<.......>.>>.................................................<<.<......................>>>>>.......<<<<<.<<<<<<<.... GGAGGAGTAATCAAGCCtGGCcaaAGTAAGcactaTGTGCTTTTGGacatgcaggacttaagatcaaataatgggtgatcctgtctCTCAGGAG.................TtCGTGGGTTCAAATCCCAC.CTCCTCCA... tRNA-Leu-TAA-1-1 Sc: 65.9
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTATGGCGCAGCCaGGTAGCGCACCGGACTCTTAATCCGGTT...........GtCAAGGGTCCGAATCCCTTTAGACCCG... tRNA-Lys-CTT-1-1 Sc: 69.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTATGGCGCAGCCaGGTAGCGCACCGGACTTTTAATCCGGTT...........GtCAAGGGTCCGAATCCCTTTAGACCCG... tRNA-Lys-TTT-1-1 Sc: 69.0
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>.................................................<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCCtGGTtAGAGTGCCAGTTCGCTtggtaatctctaacggttctccaactaaggcaatactcataATCTGGAG...........GtCGTGGGTTCGAAACCCACCCCCGGCA... tRNA-Met-CAT-1-1 Sc: 88.7
iMet tRNAs
>>>>>>>..>>>>.........................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTGGGGAAGCCaGACtAtttagggctaggtcaTCCCGGCGGGCTCATAACCCGCAG...........TtCAGTAGTTCAAATCTACTCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 77.0
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GCCAGGGTAGCTCAGCCtGGGAGAGCACTCGGCTGAAGACCGGGCT...........GtCGCGCGTTCAAATCTCGCCCCTGGCA... tRNA-Phe-GAA-1-1 Sc: 68.0
Pro tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGATTGTAGTCTAGCTtGGTATGATACTAGTCTGGGGGACTAGTG...........GtCGCAGGTTCAAATCCTGCCAATCCCA... tRNA-Pro-GGG-1-1 Sc: 67.6 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGATCGTGGTCTAGCTtGGTATGATTCTGCGTTTGGGACGCAGAG...........GtCGCGAATTCAAATTTCGCCGATCCCACCA tRNA-Pro-TGG-1-1 Sc: 74.7
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<..>>>........<<<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTCGCCTAGCCtGGTA.GGGCGCGCGCCTGGAAattgttaaaccataaAGCGCGTTCTCGCAA....GGGAaCGGGAGTTCAAATCTCCCTCCCGGCGCCA tRNA-Ser-GGA-1-1 Sc: 79.0 >>>>>>>..>>>............<<<.>>>>>......................<<<<<..>>>........<<<...>>>>>.......<<<<<<<<<<<<.... GCCGGGATAGCCAAGT..GGTA.AGGCGGCCGTCTCGAA...............AACGGCTACGTGAAA....GCGTgCAGGGGTTCGAATCCCTTTCCCGGCG... tRNA-Ser-CGA-1-1 Sc: 69.5 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<..>>>........<<<...>>>>>.......<<<<<<<<<<<<.... GCAGAGGTCGCCTAGCTcGGTA.GGGCGCGGGCCTTGAG...............AGCCTGTGTGCGCAA....GCATaCGGGGGTTCAAATCCCTCTCTCTGCG... tRNA-Ser-TGA-1-1 Sc: 76.9 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<..>>>........<<<...>.>>>.......<<<.<<<<<<<<.... GCGGGGGTCGCCTAGCCtGGTA.GGGCGTAGGATTGCTA...............ATCCTATGTTCGCAA....GAACtCGTGGGTTCAAATCCCTCTCCCCGCGCCA tRNA-Ser-GCT-1-1 Sc: 78.8
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTTCGATAGCTCAGCCtGGT.AGAGCGTTACATTGGTAATGTAAAG...........GtCGCGGGTTCAGATCCCGTTCGAAGCT... tRNA-Thr-GGT-1-1 Sc: 70.4 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTTGGTAGCTCAGCCtGGT.AGAGCGAACGCCTCGTAAGCGTTAG...........GtCGTGGGTTCGTACCCCATCCAGGGCT... tRNA-Thr-CGT-1-1 Sc: 68.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAATGTAGCTCAGCCtGGTtAGAGCAGCTGATTTGTAATCAGCAG...........GtCGTGGGTTCGGATCCCGTCATTGGCT... tRNA-Thr-TGT-1-1 Sc: 64.2
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GGGTTCGTAGTCTAGCCaGGTAGGACGATGGTCTCCAAAACCATCG...........GtCGTCGGTTCAAATCCGTCCGAGCCCA... tRNA-Trp-CCA-1-1 Sc: 71.7
Tyr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCAAGCTAGCTCAGCCtGGTAGAGCTTCCGGCTGTAGttgttggctttagatggctgaccgaataacagcatatcaggcatacagaaACCGGGTT...........GtCGAAGGTTCAATTCCTTCGCTTGGGACCA tRNA-Tyr-GTA-1-1 Sc: 56.7
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGTCTAGCT.GGTtAGGATACCGCCTCGACA...................CGGCGGTG...........AtCGTGAGTTCGAATCTCACTCGGCCCA... tRNA-Val-GAC-1-1 Sc: 65.0 >>>>>>>..>>>>..........<<<<...>>............................<<..................>>>>>.......<<<<<<<<<<<<.... GGACCGGTCGTCTAGTTtGGTtTGGATGACGCACTCACActgcgtaagggagtaatccCCGCAAAG...........GtCGTGGGTTCAAATCCCATCCGGTCCACCA tRNA-Val-CAC-1-1 Sc: 76.9 >>>>>>>..>>>............<<<.>>>>>..........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCATAGTCCAGGTcGGTtATGACGTCGCCCTTACA...................CGGCGAAG...........AtCCGGGGTTCAAATCCCCGTGGGCCCA... tRNA-Val-TAC-1-1 Sc: 69.4
SeC tRNAs
Sup tRNAs