Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTCGTCTAGTCtGGTA.GGATAGGTGCATGGCATGCATCGG...........AtCAAGGGTTCAAATCCCTTCCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 57.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTTTAGG..GGTA.TAATGCCTCGTTCGCAACGAGGAT...........GtCGAGGGTTCGATTCCCTCCCGGTCCA... tRNA-Ala-CGC-1-1 Sc: 70.7 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGTATAGCCtGGTA.GTATACCCGCCTTGCACGCGGGGG...........GtCACGGATTCAAATTCCGTCCGGTCCA... tRNA-Ala-TGC-1-1 Sc: 76.0
Arg tRNAs
>>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACTCGTTGCATAG..................CTtGGAtAGTGCGAACGCTTGCGGAGCGTTAG...........GtCGCCGGTTCGAATCCGGTCGGGTCCG... tRNA-Arg-GCG-1-1 Sc: 66.4 >>.>>>>..>>>>............................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<.<<.... GGACTCGTTGCACAG..................CCtGGAtAGTGCGGGCGGCTTCGAACCGCCAG...........GtCGAGGGATCGAAGCCCTCCGAGCCCT... tRNA-Arg-TCG-1-1 Sc: 56.3 >>>>>>>..>>>>............................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTTGTGGCGCAGagtcaatttgacgcgaaaCAtGGAtAGCGTGGTAGCCTCCTAAGTTACAG...........GtCGAGGGATCGAAGCCCTCCAAGCCCG... tRNA-Arg-CCT-1-1 Sc: 56.8 >>>>>>>..>>>>............................<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGCTCAG..................CAtGGAtAGAGTGCCGGACTTCTAATCCGATG...........GtCAAGGGATCGAAGCCCTTTGGGCCCG... tRNA-Arg-TCT-1-1 Sc: 61.9
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCCTAGCTCAGCGtGGTAGAGCATCCGACTGTTAATCGGACG...........GtCGTCAGTTCAAGTCTGATGGGCGGCGCCA tRNA-Asn-GTT-1-1 Sc: 67.1
Asp tRNAs
>>>>>>>..>>.>...........<.<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<.... GCCCTTGTAGTATAGCCcGGTctAGAATTCGGCCCTGTCACGGCTGAG...........ACGCGTGTTCAAATCCCGCCGAGGGCGCCA tRNA-Asp-GTC-1-1 Sc: 58.3
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTACTCTGGCAGAACGGTT.ATGCGTGGGCCTGCAAAGCCTATA...........CaAGGGGGTTCGACTCCCTCGGGTACCT... tRNA-Cys-GCA-1-1 Sc: 33.9
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......................<<<<<<<<<<<<.... GCTCCTATAGTGTAGTCcGGTtaAGCATACAGCCCTCTCAAGGCTGTG...........A.CCCGGGTTCAAA................TCCCGGTGGGAGCA... tRNA-Glu-CTC-1-1 Sc: 76.4 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......................<<<<<<<<<<<<.... GTTCCAGTGGTGTAGACcGGTcaAGCATACTGCCCTTTCAAGGCAGTG...........AtCCCGGGTTCAAAatcaatcgatgaaagt.CCCGGCTGGAGCACCA tRNA-Glu-TTC-1-1 Sc: 80.1
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGATAGTCTAGCGGTcaA.GGATTCTGCCCTCTGGatctcacaaagtggatatAGGCGGAG...........ACGGCAGTTCGAATCTGCCTCGGGCTA... tRNA-Gln-CTG-1-1 Sc: 61.2 >>>>>>>..>>>>..........<<<<.>>>>>.........................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGATAGTGTAGAGGTcaA.GCATATGGGCCTTTGG..................AGCCCGTG...........ACGGCAGTTCGAATCTGCCTCGGGCTA... tRNA-Gln-TTG-1-1 Sc: 65.4
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCAGTTATAGTACAGTCtGGTtAGTACTCGTGCTTGCCAAGTACGTG...........A.CCCGGGTTCAAATCCCGGTAACTGCACCA tRNA-Gly-GCC-1-1 Sc: 69.1 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGAGTTAGTTTAGTCtGGT.ATGACGTCAGCTTCCCAAGCTGAAG...........GcCGCGGGTTCAAATCCCGCACTCCGCA... tRNA-Gly-CCC-1-1 Sc: 79.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCAGTCATAGTATAGCCtGGTtAGTATTCGGGGTTTCCAACCCTGTG...........A.CGCGGGTTCGAATCCCGCTGACTGCA... tRNA-Gly-TCC-1-1 Sc: 71.0
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<.... GCCTTCGTAGTACAGTGGTtA.GTATAGAGGATTGTGGATCCTCGG...........ACAGGAGTTCGATTCCCCTCGAGGGCC... tRNA-His-GTG-1-1 Sc: 40.9
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGCTCAGCTtGGCtGGAGCGTTCGACTGATAATCGAAAG...........GtCATGAGTTCGAATCTCATCGGGCCCA... tRNA-Ile-GAT-1-1 Sc: 74.8
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAACTCAGCTtGGTAGAGTAACCGGCTCATAACCGGTGA...........GcCAAGGGATCGAAGCCCTTCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 63.8
Leu tRNAs
>>>>>>>..>>>..............<<<.>>>>>......................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGCGTCGCCCAGCCtGGCca.AAGGCGCTAGCTTGAGG...............................................GGCTAGT.CTCTCAG.......GAGTtCGTGGGTTCAAATCCCAT.CGCCCGCA... tRNA-Leu-GAG-1-1 Sc: 71.0 >>>>>>>..>>>..............<<<.>>>>>......................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTCGCCCAGCCtGGTca.ACGGCGTAAGGTTCAGA...............................................TCCTTATCTTC.TAG.......GAGTtCGTGGGTTCAAATCCCAC.TTCCCGCA... tRNA-Leu-CAG-1-1 Sc: 62.5 >>>>>>>..>>>..............<<<.>>>>>......................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTCGCCCAGCCtGGTca.AAGGCGTAGGGCTTAGG...............................................ACCCTAT.CTCTTAG.......GAGTtCGTGGGTTCAAATCCCAC.CTCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 84.3 >>>>>>>..>>>..............<<<.>>>>>......................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCAGAGATATCGAAGCCcGGTca.ACCGAGAGGGACTCAAGatcatccaaataggaa...............................ATCCCTT.CTTTTAG.......GAGTtCGTGGGTTCAAATCCCAC.TCTCTGCA... tRNA-Leu-CAA-1-1 Sc: 60.4 >>>>>>>...>................<..>..............................................................<......................>>>>>.......<<<<<.<<<<<<<.... GGAGGAGTAATCAAGCCtGGCcaaAGTAAGCGCATCTTGTGcttttggacatgcaggacttaagatcaaataatgggtgatcctgtctCTCAGGAG.................TtCGTGGGTTCAAATCCCAC.CTCCTCCA... tRNA-Leu-TAA-1-1 Sc: 65.9
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTATGGCGCAGCCaGGTAGCGCACCGGACTCTTAATCCGGTT...........GtCAAGGGTCCGAATCCCTTTAGACCCG... tRNA-Lys-CTT-1-1 Sc: 69.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTATGGCGCAGCCaGGTAGCGCACCGGACTTTTAATCCGGTT...........GtCAAGGGTCCGAATCCCTTTAGACCCG... tRNA-Lys-TTT-1-1 Sc: 69.0
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>................................................<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCCtGGTtAGAGTGCCAGTTACTTGgtaaactctagcggttctccaactaaggcaatactcataATCTGGAG...........GtCGCGAGTTCGAAACTCGCCCCCGGCA... tRNA-Met-CAT-1-1 Sc: 85.8
iMet tRNAs
>>>>>>>..>>>>.........................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTGGGGAAGCCaGACtAtttagggctaggtcaTCCCGGCGGGCTCATAACCCGCAG...........TtCAGTAGTTCAAATCTACTCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 77.0
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GCCGGGGTAGCTCAGCCtGGGAGAGCACTCGGCTGAAGACCGGGCT...........GtCGCGCGTTCAAATCCCGCCCCCGGCA... tRNA-Phe-GAA-1-1 Sc: 73.2
Pro tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGATCGTCGTCTAGCTtGGTATGATACTAGTCTGGGGGACTAGTG...........GtCGCAGGTTCAAATCCTGCCGGTCCCA... tRNA-Pro-GGG-1-1 Sc: 66.1 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GGGATCGTGGTCTAGCTtGGTATGATTCTGCGTTTGGGACGCAGAG...........GtCGCGCGTTCAAATCTCGCCGATCCCACCA tRNA-Pro-TGG-1-1 Sc: 72.0
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<..>>>.........<<<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTCGCCTAGCCtGGTA.GGGCGCGCGCCTGGAAattgttaaccataaAGCGCGTTCTCGCAA.....GGGAaCGGGAGTTCAAATCTCCCTCCCGGCGCCA tRNA-Ser-GGA-1-1 Sc: 79.0 >>>>>>>..>>>............<<<.>>>>>.....................<<<<<..>>>.........<<<...>>>>>.......<<<<<<<<<<<<.... GCCGGGATAGCCAAGT..GGTA.AGGCGGCCGTCTCGAA..............AACGGCTACGCGCAA.....GCGTgCAGGGGTTCGAATCCCTTTCCCGGCG... tRNA-Ser-CGA-1-1 Sc: 74.5 >>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<..>>>.........<<<...>>>>>.......<<<<<<<<<<<<.... GCAGAGGTCGCCTAGCTcGGTA.GGGCGCGGGCCTTGAG..............AGCCTGTGTGCGCAA.....GCATaCGGGGGTTCAAATCCCTCTCTCTGCG... tRNA-Ser-TGA-1-1 Sc: 76.9 >>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<....>.........<.....>>>>>.......<<<<<<<<<<<<.... GCGGGGATCGCCTAGCCtGGTA.GGGCGTGGGATTGCTA..............ATCCCATGTCCGCAAg....GACA.CGGGGGTTCAAATCCCCCTCCCCGCGCCA tRNA-Ser-GCT-1-1 Sc: 91.9
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTTCGATAGCTCAGCCtGGT.AGAGCGTTACCTTGGTAAGGTAAAG...........GtCGCGGGTCCGGATCCCGTTCGAAGCT... tRNA-Thr-GGT-1-1 Sc: 63.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTTGGTAGCTCAGCCtGGT.AGAGCGAACGCCTCGTAAGCGTTAG...........GtCGCGGGTTCAGATCCCGTCCGAGGCT... tRNA-Thr-CGT-1-1 Sc: 80.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAATGTAGCTCAGCCtGGCtAGAGCATTCGCCTTGTAAGCGAAAG...........GtCATGGGTTCAGATCCCATCATTGGCT... tRNA-Thr-TGT-1-1 Sc: 71.1
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>.>..........................................................................................<.<<................>>>>>.......<<<<<<<<<<<<.... GGGGTCGTAGCCTAGCCtGGTAGGGCGACAGTGTCTACgaaaaaagatcaccgctaagggctccagaggtaaactaagctaaactgactcacggatgatgtaagtttggagctgtagtgACCCGTAG...........GtCGCCGGTTCGATTCCGGTCGGCCCCA... tRNA-Trp-CCA-1-1 Sc: 78.0
Tyr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCAAGCTAGCTCAGCCtGGTAGAGCTTCCGGCTGTAGttgttggctttagatggctgaccgaataacagcatatcaggcatacagaaACCGGGTT...........GtCGAAGGTTCAATTCCTTCGCTTGGGACCA tRNA-Tyr-GTA-1-1 Sc: 56.7
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...........................<<<<<................>.>>>.......<<<.<<<<<<<<.... GGGCCGGTAGTCTAGCT.GGTtAGGATACCGCCTCGACA....................CGGCGGTG...........AtCGTGAGTTCGAATCTCTCTCGGCCCA... tRNA-Val-GAC-1-1 Sc: 58.6 >>>>>>>..>>>>..........<<<<...>>.............................<<..................>>>>>.......<<<<<<<<<<<<.... GGACCGGTCGTCTAGTTtGGTtTGGATGACGCACTCACActgcgtaagagatcaattctCCGCAAAG...........GtCGTGGGTTCAAATCCCATCCGGTCCA... tRNA-Val-CAC-1-1 Sc: 71.1 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCATAGTCCAGGTcGGTtATGACGTCGCCCTTACA....................CGGCGAAG...........AtCCGGGGTTCAAATCCCCGTGGGCCCA... tRNA-Val-TAC-1-1 Sc: 69.4
SeC tRNAs
Sup tRNAs