Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTCGTCTAGTCtGGTA.GGATGCGCCCTTGGCATGGGCGAG...........AtCGAGGGTTCAAATCCCTCTCGGTCCACCA tRNA-Ala-GGC-1-1 Sc: 79.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGTTTAGG..GGTA.TAATGCTGCGTTCGCAACGCAGAA...........GtCGGGGGTTCAATTCCCTCCCGGTCCACCA tRNA-Ala-CGC-1-1 Sc: 77.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTGATAGTATAGACtGGTA.GTATACCCGCCTTGCACGCGGGGG...........GtCGGGGGTTCAAATCCCCCTCAGTCCACCA tRNA-Ala-TGC-1-1 Sc: 79.5
Arg tRNAs
>>>>>>>..>>>>................................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTTGCATAGCAtGGAtA......................GTGCGATCGCTTGCGGAGCGATAG...........GtCGCCGGTTCGAATCCGGTCGGGCCCG... tRNA-Arg-GCG-1-1 Sc: 69.1 >>>>>>>..>>>>................................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTTGCATAGCCtGGAtA......................GTGCAGGTGATTCCGGATCATCAG...........GtCGGGGGATCGAAGCCCCCCGGGTCCT... tRNA-Arg-CCG-1-1 Sc: 55.8 >>.>>>>..>>>>................................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<.<<.... GGACTCGTTGCACAGCCtGGAcA......................GTGCGGGCGGCTTCGGACCGCCAG...........GtCGAGGGATCGAAGCCCTCCGAGCCCT... tRNA-Arg-TCG-1-1 Sc: 56.3 >>>>>>>..>>>>................................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTGGCGCAGTGcCGC.AtctgcggcgcgcagcatggataGCGCGGTAGCCTCCTAAGTTACAG...........GtCGAGGGATCGAAGCCCTCCGAGCCCG... tRNA-Arg-CCT-1-1 Sc: 61.8 >>>>>>>..>>>>................................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAGCAtGGAtA......................GAGTGTTGGACTTCTAATCCAATG...........GtCAAGAGATCGAAGCTCTTCAGGCCCG... tRNA-Arg-TCT-1-1 Sc: 61.2
Asn tRNAs
>>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCGCCCTAGCTCAGCCcGGTAGAGCGTCGGACTGTTAATCCGTTG...........GtCGCCAGTTCAAGTCTGGTGGGCGGCGCCA tRNA-Asn-GTT-1-1 Sc: 77.2
Asp tRNAs
>>>>>>>..>>.>...........<.<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<.... GCCCTTGTAGTATAGCCcGGTctAGAATTCGGCCCTGTCACGGCTGAG...........ACGCGTGTTCAAATCCCGCCGAGGGCGCCA tRNA-Asp-GTC-1-1 Sc: 58.3
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTGAGATGGCAGAGCGGTT.ATGCGTGGGCCTGCAAAGCCTATC...........TaTGGGGGTTCAACTCCCTCTCTCACCT... tRNA-Cys-GCA-1-1 Sc: 50.9
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>......................<<<<<<<<<<<<.... GCTCCTGTGGTGTAGTCcGGCcaAGCATACTGCCCTCTCAAGGCAGTG...........AtCCCGGGTTCAAAT...............CCCGGCGGGAGCA... tRNA-Glu-CTC-1-1 Sc: 79.4 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>......................<<<<<<<<<<<<.... GCTCCTGTGGTGTAGTCcGGTcaAGCATACTGCCCTTTCAAGGCAGTG...........AtCCCGGGTCCAAATtcgacagatggaagtCCCGGCGGGAGCACCA tRNA-Glu-TTC-1-1 Sc: 79.1
Gln tRNAs
>>>>>>>..>>>>...........................<<<<.>>>>>......................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGATAGTCTAGTCtGGCcAaaccttacggggccaa.GGATTCCGCGCTCTGGatctagcgagtagacACGCGGAG...........ACGGCAGTTCGAATCTGCCTCGGGCTA... tRNA-Gln-CTG-1-1 Sc: 65.0 >>>>>>>..>>>>...........................<<<<.>>>>>......................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGGTGGTGTAGC..GGA.A.................GCATGGGGGCCTTTGG...............AGCCCCCG...........ACCCCAGTTCGAATCTGGGCCGGGCTA... tRNA-Gln-TTG-1-1 Sc: 78.6
Gly tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCAGTCATAGTATAGTTtGGTtATTATTCCAGCTTGCCAAGTTGGTG...........A.CCCGGGTCCAAATCCCGGTGACTGCA... tRNA-Gly-GCC-1-1 Sc: 56.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GCGGAGTTAGTCCAGCCcGGT.AGGACGTCAGCTTCCCAAGCTGAAG...........GtCGCGTGTTCAAATCCCGCACTCCGCA... tRNA-Gly-CCC-1-1 Sc: 76.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCAGTCATAGTATAGCTtGGTcAGTATACGGGGTTTCCAACCCTGCG...........A.CGCGGGTTCAAATCCCGCTGACTGCA... tRNA-Gly-TCC-1-1 Sc: 68.8
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<.... GCCTCCGTCGTATAGTGGCtA.GTATAGGGGACTGTGGATCCCCGG...........ACGGGTGTTCGATTCCCCCCGGAGGCC... tRNA-His-GTG-1-1 Sc: 47.2
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGCTCAGCTtGGCtGGAGCGTTCGACTGATAATCGAAAG...........GtCATGAGTTCGAATCTCATCGGGCCCA... tRNA-Ile-GAT-1-1 Sc: 74.8
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAACTCAGCCtGGTAGAGTAACCGACTCATAATCGGTGA...........GcCGTGAGATCAAAGCTCGCCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 62.7
Leu tRNAs
>>>>>>>..>>>..............<<<.>.>>>>.................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTAGCCCAGCCtGGTca.AAGGCGC.TAGCTTGAGG..........................................GGCTAGT.CTC..TTAG.......GAGTtCGTGGGTTCAAATCCCAT.CGCCCGCA... tRNA-Leu-GAG-1-1 Sc: 74.2 >>>>>>>..>>>..............<<<.>.>>>>.................................................<<<<<...>>>...........<<<....>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTCGCCCAGCCcGGTca.AAGGCGT.AAGGTTCAGG..........................................TCCTTATCTCTCA.........GGAGTA.CGTGGGTTCGAATCCCAT.CTCCCGCA... tRNA-Leu-CAG-1-1 Sc: 63.9 >>>>>>>..>>>..............<<<.>.>>>>.................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTTGCCGAGCCtGGTca.AAGGCGC.AGGGCTTAGG..........................................ACCCTGTCTTC...TAG.......GAGTcCGCGGGTTCGAATCCCGC.CTCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 87.5 >>>>>>>..>>>..............<<<.>.>>>>.................................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCAGGGGTATCGAAGCCcGGTca.ACCGAGA.AGGACTCAAGatcacggtgggtg.............................ATCCTTT.CCCCC.........AGGGGTtCGTGGGTTCAAATCCCAC.CTCCTGCACCA tRNA-Leu-CAA-1-1 Sc: 66.2 >>>>>>>...>................<..>.>.>>.................................................<<.<<........................>>>>>.......<<<<<.<<<<<<<.... GGAGGAGTAATCAAGCCtGGCcaaAGCAAGCgCAAGCTTTTGgagatgcaggacttaagatcaaaaaaataggggatcctgtctCCTAGGGG...................TtCGTGGGTTCAAATCCCAC.CTCCTCCA... tRNA-Leu-TAA-1-1 Sc: 66.2
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTTTATGGCTCAGCCaGGTAGAGCACCGGACTCTTAATCCGGCT...........GtCAGGGGTTCGAATCCCCTTAAACCCG... tRNA-Lys-CTT-1-1 Sc: 74.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTGTGGCGCAGCCaGGTAGCGCACCGGACTTTTAATCCGGCT...........GtCGTGGGTTCGAATCCCACTAGACCCA... tRNA-Lys-TTT-1-1 Sc: 78.4
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>..........................<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGATAGCTCAGCCGGTcAGAGTGCCAGCTTTCTCcaaaggcaagactcataATCTGGAG...........GtCGTGGGATCAAAACCCACTCCCGGCA... tRNA-Met-CAT-1-1 Sc: 75.1
iMet tRNAs
>>>>>>>..>>>>.........................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTGGGGAAGTCaGacgcatgcgggcaaaGTcATCCCGGCGGGCTCATAACCCGCAG...........AtCAGTAGTTCAAATCTACTCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 78.1
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GCCAGGGTAGCTCAGCCtGGGAGAGCACTCGGCTGAAGACCGAGCT...........GtCGCGCGTTCAAATCCCGCCCCTGGCACCA tRNA-Phe-GAA-1-1 Sc: 79.8
Pro tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGACCGTCGTCTAGATtGGCcATGATGCTAGCCTGGGGTGCTAGAG...........GtCGCAGGTTCAAATCCTGCCGGTCCCACCA tRNA-Pro-GGG-1-1 Sc: 75.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGACGTGGGTTAGCTtGGT.ATACTGCCAGCCTCGGGCGCTGGAG...........AtCATGGGTTCGAATCCCATCGTCCCCA... tRNA-Pro-CGG-1-1 Sc: 84.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGACCGTAGTCTAGCTtGGC.ATGATTCTGGTTTTGGGTACCAGAG...........GcCGCAGGTTCAAATCCTGCCGGTCCCACCA tRNA-Pro-TGG-1-1 Sc: 76.9
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<..>>>.........<<<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTCGCCTAGCCtGGTA.GGGCGCGCGCCTGGAAatcagcgaccatacAGCGCGTTCTCGCAA.....GGGAtCGGGAGTTCGAATCTCCCTCCCGGCGCCA tRNA-Ser-GGA-1-1 Sc: 77.8 >>>>>>>..>>>............<<<.>>>>>.....................<<<<<..>>>.........<<<...>>>>>.......<<<<<<<<<<<<.... GCCAGGTTAGCCAAGT..GGTA.CGGCGGCCGCCTCGAA..............AGCGGCTGCGCGCAA.....GCGCtCAGGGGTTCGAATCCCTTACCTGGCG... tRNA-Ser-CGA-1-1 Sc: 74.2 >>>>>>>..>>>............<<<.>>>>>.....................<<<<<..>>>.........<<<...>>>>>.......<<<<<<<<<<<<.... GCAGAGGTCGCCTAGCCcGGCA.TGGCGCGGGCCTTGAG..............AGCCTGTGCGAGCAA.....TCGCaCGGGGGTTCAAATCCCCCTCTCTGCGCCA tRNA-Ser-TGA-1-1 Sc: 82.4 >>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<...>...........<....>>>>>.......<<<<<<<<<<<<.... GCAGGGGTCACCTAGCCtGGTA.GGGTGTGGGACTGCTA..............ATTCCATGTTCGCAAg....AACA.CGGGGGTTCGAATCCCCCTCCCTGCGCCA tRNA-Ser-GCT-1-1 Sc: 75.2
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTTCGATAGCTCAGCCtGGTAGAGCGTTACCTTGGTAAGGTAAAG...........GtCGTGGGTTCGGATCCCACTCGAAGCT... tRNA-Thr-GGT-1-1 Sc: 72.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCGGTGGCTCAGACcGGCAGAGCAAACGCCTCGTAAGCGTTAG...........GcCGTGGGTTCAAATCCCACCCGAGGCTCCA tRNA-Thr-CGT-1-1 Sc: 87.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAATGTAGCTCAGCCtGGTAGAGCATTCGCCTTGTAAGCGAAAG...........GtCGAGGGTTCAAAGCCCTCCATTGGCT... tRNA-Thr-TGT-1-1 Sc: 76.7
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>.>................................................................................<.<<................>>>>>.......<<<<<<<<<<<<.... GGGGTCGTAGCCTAGCCtGGTAGGGCGACAGTCTGCGAaattaccgccaagggctccagaggtctgtaccaagctggctgattgatgatgtaagtttggagctgcagagACCCGTAG...........GtCGCCGGTTCGATTCCGGTCGGCCCCA... tRNA-Trp-CCA-1-1 Sc: 86.7
Tyr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCAAGCTAGCTCAGCCtGGTAGAGCTTCCGGCTGTAGatgtcggccttggctgaccgtataacagcatatcaggcatacagagACCGGGTT...........GtCGAAGGTTCAATTCCTTCGCTTGGGACCA tRNA-Tyr-GTA-1-1 Sc: 56.9
Val tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>..........................<<<<<................>.>>>.......<<<.<<<<<<<<.... GGGCCGGTAGTCTAGT..GGT.A.GGATACCGCCTCGACA...................CGGCGGTG...........AtCGTGAGTTCAAATCTCTCTCGGCCCACCA tRNA-Val-GAC-1-1 Sc: 67.0 >>>>>>>..>>>>...........<<<<..>>>............................<<<.................>>>>>.......<<<<<<<<<<<<.... GGACCGGTTGTCTAGT..GGTcA.GGATGACGCACTCACActgcgtaagggcatctgccCCGCGACG...........GtCATGGGTTCGACCCCCATCCGGTCCA... tRNA-Val-CAC-1-1 Sc: 65.0 >>>>>>>..>>>.............<<<.>>>>>..........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCATAGTCCAGTTcGGTcA.TGACGTCGCCCTTACA...................CGGCGAAG...........AtCCGGGGTTCAAATCCCCGTGGGCCCA... tRNA-Val-TAC-1-1 Sc: 72.5
SeC tRNAs
Sup tRNAs