Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGATCAGG.GGAA.GATCGCTACCTTGGCATGGTAGAG...........GcCTCGGGTTCAATTCCCGACCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 66.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGATCAGG.GGAA.GATCGTTACGTTCGCAACGTAAAG...........GcCGCGGGTTCAAATCCCGCCGAGTCCA... tRNA-Ala-CGC-1-1 Sc: 70.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTTGTAGATCAGCTGGAA.GATCGCTGCCTTTGCAAGGCAGAG...........GcCCTGGGTTCGAGTCCCAGCAAGTCCA... tRNA-Ala-TGC-1-1 Sc: 69.6
Arg tRNAs
>>>>>>>..>>>.............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCCCGATAGGGTAGT..GGAtA.TCCTTGAGGCCTGCGG....................AGCCTTAG...........A.CCTGAGTTCAAGTCTCAGTCGGGACG... tRNA-Arg-GCG-1-1 Sc: 62.0 >>>>>>>..>>>.............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGTCTGTGGTGTAGA..GGAtA.TCACTGGAGCCTCCGG....................AGCTCCGA...........A.CCTGGGTTCGATTCCCAGCAGACCTG... tRNA-Arg-CCG-1-1 Sc: 56.5 >>>>>>>..>>>.............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTGGGGTAGCCaGGAtA.TCCTAATGGGCTTCGAagtaagattcttacgaagatACCCATTG...........A.CTCGTGTTCGAATCGCGGCGGGCCCG... tRNA-Arg-TCG-1-1 Sc: 60.5 >>>>>>>..>>>.............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCGTGGCCTAGCCcGGAtA.TGGCGGCAGCCTCCTA....................AGCTGTAA...........AtCGGGGGTTCAAATCCCTTCGCGCCCG... tRNA-Arg-CCT-1-1 Sc: 82.9 >>>>>>>..>>>.............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTGGCTTAGCCaGGAtA.TAGCGCTGGGCTTCTA....................ACCCAGAC...........GtCGGGGGTTCAAATCCCTTCGAGCCCG... tRNA-Arg-TCT-1-1 Sc: 84.2
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCTTTAACTCAGTTGGTAGAGTGTCTGGCTGTTAACCAGAAT...........GtCGTAGGTTCGAGCCCTGCAAGCGGCG... tRNA-Asn-GTT-1-1 Sc: 52.6 GCCGCTTTAACTCAGTTGGTAGAGTGTCTGGCTGTTAACCAGAAT...........GtCGTAGGTTCGAGCCCTGCAAGCGGCG... tRNA-Asn-GTT-1-2 Sc: 52.6
Asp tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GTCCGGATAGTGTAGAGGCctA.TCATGGAGCCCTGTCGAGGCTCCG...........ACTCGGGTTCGAATCCCGGTCCGGGCG... tRNA-Asp-GTC-1-1 Sc: 63.4
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAAGATGGCGGAGCGGCT.ACGCAATCGCCTGCAGAGCGATTC...........CaTTCCGGTTCGAATCCGGATCTTGGCT... tRNA-Cys-GCA-1-1 Sc: 52.9 GCCAAGATGGCGGAGCGGCT.ACGCAATCGCCTGCAGAGCGATTT...........CaTTCCAGTTCGAATCTGGATCTTGGCT... tRNA-Cys-GCA-2-1 Sc: 48.9 GTCAGAATGGCAGAGTGGCT.ATGCTTCCGGCTGCAACCCGGAAT...........TaCGTGAGTTCGATTCTCACTTCTGACT... tRNA-Cys-GCA-3-1 Sc: 42.0
Glu tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCCGATAGTGTAGCTcGGCcaATCATTCAGGACTCTCACTCCTGCG...........ACTGGGGTTCAAATCCCCATCGGAGCA... tRNA-Glu-CTC-1-1 Sc: 69.7 >>>>>>>..>>>.............<<<..>>>>.......<<<<................>>>>>.......<<<<<<<<<<<<.... GCTCCGGTAGTGTAGTCcGGCcaATCATTCCGGCCTTTCGAGCCGAAG...........ACTCGGGTTCGAATCCCGGCCGGAGCACCA tRNA-Glu-TTC-1-1 Sc: 78.9 GCTCCGGTAGTGTAGTCcGGCcaATCATTCCGGCCTTTCGAGCCGAAG...........ACTCGGGTTCGAATCCCGGCCGGAGCACCA tRNA-Glu-TTC-1-2 Sc: 78.9
Gln tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<...............>.>>>.......<<<.<<<<<<<<.... AGCCCGGTAGTGTAGT..GGTcaA.TCATGCGGGACTCTGGATCCTGCA...........ACCTCGGTTCGAATCCGTGCCGGGCTA... tRNA-Gln-CTG-1-1 Sc: 68.7 .>>>>>>..>>>..............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<..... AGCCCTGTAGTGTAGCCaGGCcaA.TCACTCTTGACTTTGGATCAAGAA...........ACCCCGGTTCAAATCCGGGCAGGGCAA... tRNA-Gln-TTG-1-1 Sc: 69.0 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGTCCTGTAGGGTAGT..GGTcaA.TCCTTCGGGCCTTTGGAGCCCGGG...........ACAGCGGTTCGAATCCGCTCAGGACTA... tRNA-Gln-TTG-2-1 Sc: 64.9
Gly tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... ACATCAGTAGTGTAGCGGTcA.TCACCGGGCGTTGCCAACGCTCGA...........ACCCGGGTTCGAATCCCGGCTGGTGTA... tRNA-Gly-GCC-1-1 Sc: 57.0 ACATCAGTAGTGTAGCGGTcA.TCACCGGGCGTTGCCAACGCTCGA...........ACCCGGGTTCGAATCCCGGCTGGTGTA... tRNA-Gly-GCC-1-2 Sc: 57.0 ACATCAGTAGTGTAGCGGTcA.TCACCGGGCGTTGCCAACGCTCGA...........ACCCGGGTTCGAATCCCGGCTGGTGTA... tRNA-Gly-GCC-1-3 Sc: 57.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGACTGTGGTTTAGTGGCtA.TGACCTGAGCTTCCCAAGCTTAGA...........ACCCGGGTTCGAATCCCGGCAGTCGCA... tRNA-Gly-CCC-1-1 Sc: 55.6 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGTTGATGGTCTAGCGGCtA.TGACTTGGGCCTTCCAAGCCCAAA...........ACCCGGGTTCGAATCCCGGTCGGCGCA... tRNA-Gly-TCC-1-1 Sc: 68.7
His tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGGGTAGAGGTccA.TCCTGTGGCCCTGTGGAGGCTACG...........ACCCGAGTTCGATTCTCGGTCCCGGCC... tRNA-His-GTG-1-1 Sc: 58.0
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGCCtGGT.GGAGCGCACGGCTGATAACCGTGAG...........GtCCTGCGTTCGAATCGCAGCGGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 96.9 GGGCCCGTAGCTTAGCCtGGT.GGAGCGCACGGCTGATAACCGTGAG...........GtCCTGCGTTCGAATCGCAGCGGGCCCACCA tRNA-Ile-GAT-1-2 Sc: 96.9
Ile2 tRNAs
>>>>>.>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<<.... GGGCCCGTAGCTCAGTCaGGTtAGAGCGCTCGGCTCATAACCGAGCG...........GtCACCGGTTCAAATCCGGTCAGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 79.2
Leu tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGAGGGTTGCCCAGCCaGGTcaA.AGGCGCTAGGTTGAGGGCCTAGTTTCGTAG....GAATtCGTGGGTTCGAATCCCAT.CCCTCGCACCA tRNA-Leu-GAG-1-1 Sc: 76.0 GCGAGGGTTGCCCAGCCaGGTcaA.AGGCGCTAGGTTGAGGGCCTAGTTTCGTAG....GAATtCGTGGGTTCGAATCCCAT.CCCTCGCA... tRNA-Leu-GAG-2-1 Sc: 70.3 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGAGAGTTGCCCAGCCaGGTcaA.AGGCGCCAGGTTCAGAGCCTGGTCTTGTAG....GAGTtCGTGCGTTCGAATCGCAC.CTCTCGCA... tRNA-Leu-CAG-1-1 Sc: 64.5 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGAGGGTTGCCCAGCTaGGTcaA.AGGCGATGGGCTTAGGACCCATTTTCGTAG....GAATtCGTGCGTTCGAATCGCAC.CCCTCGCA... tRNA-Leu-TAG-1-1 Sc: 71.7 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTAACCAAGC..GGTcaA.CGGTGGCAGACTCAAGATCTGTTCGTGCAG....ACGTtCAGGGGTTCGAATCCCTT.CTCCCGCA... tRNA-Leu-CAA-1-1 Sc: 67.0 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGAGGGTTGCCCAGCCaGGCcaA.AGGCGCCAGACTTAAGATCTGGTATCGAAG....GATTtCGTGGGTTCGAATCCCAC.CCCTCGCA... tRNA-Leu-TAA-1-1 Sc: 76.8
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGTCaGGCAGAGCGATGGACTCTTAATCCATAG...........GcCGGGGGTTCAAATCCCTTCGGGCCCG... tRNA-Lys-CTT-1-1 Sc: 87.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGTCaGGCAGAGCGACTGGCTTTTAACCAGTCG...........GcCTAGGGTTCAAATCCCTACGGGCCCGCCA tRNA-Lys-TTT-1-1 Sc: 91.0
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGATAGCCTAGTCGGTtGGGGCGCCAGACTCATAgggactttatatgaggcgtctttaatctcctgagatATCTGGAG...........GtCGCGTGTTCGAGTCACGCTCCGGGCA... tRNA-Met-CAT-1-1 Sc: 68.0
iMet tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTGGGGTAGCCaGGAgATCCCGACGGGCTCATAACCCGTAG...........AcCGATGGTTCGAATCCATCCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 85.6 AGCGGGGTGGGGTAGCCaGGAgATCCCGACGGGCTCATAACCCGTAG...........AcCGATGGTTCGAATCCATCCCCCGCTA... tRNA-iMet-CAT-1-2 Sc: 85.6
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCAGGTAGCTCAGTGGGA.GAGCGCTGCCCTGAAGAGGCAGTT...........GtCCCCGGTTCGAATCCGGGTCTGGGCACCA tRNA-Phe-GAA-1-1 Sc: 82.6 GCCCAGGTAGCTCAGTGGGA.GAGCGCTGCCCTGAAGAGGCAGTT...........GtCCCCGGTTCGAATCCGGGTCTGGGCACCA tRNA-Phe-GAA-1-2 Sc: 82.6
Pro tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGGGCCGTAGGGTAGCTtGGTccATCCTGCAAGGCTGGGGGTCTTGCG...........ACTTGAGTTCGAATCTCAGCGGCCCCACCA tRNA-Pro-GGG-1-1 Sc: 71.7 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGGACCGTAGGGTAGCTtGGTccATCCTTCGGCGTTCGGGACGCCGTA...........ACCTGAGTTCGAATCTCAGCGGTCCCA... tRNA-Pro-CGG-1-1 Sc: 71.7 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGGATAGTAGGGTAGCTtGGTccATCCTCGAGCGTTTGGGACGCTTGG...........ACCGCGGTTCAAATCCGCGCTATCCCA... tRNA-Pro-TGG-1-1 Sc: 62.1
Ser tRNAs
>>>>>>>..>>>>............<<<<.>>>>>.......<<<<<..>>>................<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGAGGTAGTCTAGC..GGT..A.GGGCGCAAGCCTGGAAAGCTTGTGGGG....CTTAg.......CCCCtCGGGAGTTCAAATCTCCC.CCTCGGCG... tRNA-Ser-GGA-1-1 Sc: 78.1 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>................<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCAGGTCGTCTAGT..GGT..A.TGGCGACGGTCTCGAAAACCGTT.CCC....TTT.........GGGAtCGCAGGTTCAAATCCTGC.CCTGGGCG... tRNA-Ser-CGA-1-1 Sc: 68.9 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>............<<<<<...>>>>>.......<<<<<.<<<<<<<.... GCTGAGGTAGCCAAGC..GGAccA.CGGCGCCGGTCTTGAAAACCGGT.AGCGCCA.........CGCGCTA.CGGGAGTTCGAATCTCCC.CCTCAGCG... tRNA-Ser-TGA-1-1 Sc: 71.1 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<......>............<.......>>>>>.......<<<<<.<<<<<<<.... GACGAGATAGCCAAGCCcGGT..A.TGGCGTGGGATTGCTAATCCCATGATGCCC..........TGCATCG.CGGGGGTTCGAGTCCCCC.TCTCGTCG... tRNA-Ser-GCT-1-1 Sc: 65.5
Thr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTTGGTGGCTTAGG..GGTA.TAGCGCGTCCTTGGTAAGGACGAG...........GtCGCGGGTTCAAATCCCGCCCGAGGCT... tRNA-Thr-GGT-1-1 Sc: 75.8 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGTCGTGGCTTAGT..GGTA.TAGCGGCTGATTCGTAATCAGCAG...........GcCGAGGGTTCGAGTCCCTCCGGCGGCT... tRNA-Thr-CGT-1-1 Sc: 74.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCGTTGGCTCAGCCcGGTA.GAGCGAGTGACTTGTAATCACTAG...........GtCGCGTGTTCAAATCACGCACGGGGCT... tRNA-Thr-TGT-1-1 Sc: 76.8
Trp tRNAs
>>>>>>>..>>>...........<<<.>>>>>.............................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTGGCCTAGCCcGGCATGGCGATGGGCTCCAGcggataaatgatgaacaacgggtctaccgagtccttcccgacggggcaggacaatgaggaaccgttggagcactgatagatgctcaccagagaactgtaaaagcagttgttcggagatACCCGTCG...........AtCGTGAGTTCGAATCTCACCAGCCCCA... tRNA-Trp-CCA-1-1 Sc: 69.0
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCGCCTTAACTCAGTGGTA.GAGTGCGCGGCTGTAGttcggctcgtgcgggttcctcccgtacatctctgcgcaggcACCGCGAT...........GtCCCCGGTTCGAGTCTGGGAGGCGGGA... tRNA-Tyr-GTA-1-1 Sc: 59.0
Val tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTGGTCTAGACGGTtATGACGTCGCCTTGACATGGCGGAG...........GtCCTGAGTTCGAATCTCAGCGGGCCCA... tRNA-Val-GAC-1-1 Sc: 68.0 GGGCTCGTGGTCTAGACGGTtATGACGTCGCCTTGACATGGCGGAG...........GtCCTGAGTTCGAATCTCAGCGGGCCCA... tRNA-Val-GAC-1-2 Sc: 68.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTGGTCTAGACGGTtATGACGTCGCCTTCACACGGCGGAG...........GtCCTGAGTTCGAATCTCAGCGGGCCCA... tRNA-Val-CAC-1-1 Sc: 70.7 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTGGTCTAGTCGGTcATGACATCGCCTTTACACGGCGGGG...........AtCCTGAGTTCGAATCTCAGCGGGCCCA... tRNA-Val-TAC-1-1 Sc: 65.2
SeC tRNAs
Sup tRNAs