Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>..........<.<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTCGTCTAGTCcGGTA.G.GATACGGCATTGGCA..............................TTGCTGAG...........GtCGTGGGTTCAAATCCCACCCGGTCCACCA tRNA-Ala-GGC-1-1 Sc: 79.4 >>>>>>>..>>>>..........<.<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTGGTAGTTCAGG..GGTA.GtAATGCTCGCTTCGCA..............................AGCGAGAG...........GtCGCGGGTTCAAATCCCGCCCAGTCCA... tRNA-Ala-CGC-1-1 Sc: 71.4 >>>>>>>..>>>>..........<.<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTGGTAGTTTAGTCcGGTA.G.AATACCTGCCTTGCAtgccttgcatatacatgcaggcagaggacaCGTAGGTG...........GtCGTGGGTTCGAATCCCACCCAGTCCA... tRNA-Ala-TGC-1-1 Sc: 76.1
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGTTCAGCTtGGAcAGAATGGCTGCCTGCGG..................AGCAGTTG...........GtCGAGGGTTCGAGTCCCTCTGGGCCCG... tRNA-Arg-GCG-1-1 Sc: 77.8 >>>>>>>..>>>>..........<<<<.>>>.>.........................<.<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGCCTAGTCaGGAcAGGGTGCTGATCTGAAAaagagcgcatgcctccggAGCTAGTT...........GtCGTGGGATCGAAGCCCACCGGGCCCG... tRNA-Arg-CCG-1-1 Sc: 64.8 >>>>>>>..>>>............<<<.>>>>>.........................<<<<<................>.>>>.......<<<.<<<<<<<<.... GGGCCCGTAGCGTAGTCaGGAtATCGCGGCGGTCTTCGG..................AACCGCAG...........GcCGTGGGATCGAAGCCCTCCGGGCCCG... tRNA-Arg-TCG-1-1 Sc: 67.9 >>>>>>>..>>>>..........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGCTCAGCAtGGAcAGAGCGAACGCCTCCTA..................AGCGTTAG...........GtCGTGGGTTCGAATCCCACCGGGCCCG... tRNA-Arg-CCT-1-1 Sc: 84.1 >>>>>>>..>>>>..........<<<<.>>.>>.........................<<.<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGCTCAGCAtGGAtAGAGCGCCTGCCTTCTAaacgtcctgttgaagac.AGCCGGAA...........GtCGTGGGATCGAAGCCCACCGGGCCCG... tRNA-Arg-TCT-1-1 Sc: 50.4
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>.>.............................................<.<................>>>>>.......<<<<<<<<<<<<.... GCCGCTGTAGCTCAGCAtGGTAGAGCAAATTCAAAgcgcaatattgtgcttcggagcttaactggctgttaA.CCAGTGG...........GtCACCAGTTCGAGTCTGGTCAGCGGCGCCA tRNA-Asn-GTT-1-1 Sc: 74.2
Asp tRNAs
>>>>>>>...>>>..................<<<...>>.....................................<<.................>>>>>.......<<<<<<<<<<<<.... GCCCGGGTAGTATAgagaaGCCcGGCtattAGTAGCTGGCCTCGTAcagtccggtccagtatgggggactgtcaCTCCTCCG...........ACCCGGGTTCGAATCCCGGCCCGGGCG... tRNA-Asp-GTC-1-1 Sc: 77.0
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTGGGGTGGCAGAGCGGCC.ATGCGTTCGCCTGCAGaactgcacaagtgcagccAGCGAATT...........TaTAGGGGTTCGAATCCCCTCCCCACCT... tRNA-Cys-GCA-1-1 Sc: 53.1
Glu tRNAs
>>>>>>>..>>>>............<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTCCGGTGGTGTAGTCcGGTtaA.GCATTTCGCCC.TCTCA.............................................AGGCGGAG...........AtCCCGGGTTCAAATCCCGGCCGGAGCA... tRNA-Glu-CTC-1-1 Sc: 81.4 >>>>>>>..>.>..............<.<..>>>>.....................................................<<<<.................>>>>>.......<<<<<<<<<<<<.... GCTCCGGTGGTGTAGT..GGCt.A.TTCTGCCGGCCgTCATGtccggcaaggggctgcacagtccggtcaagcattgtggcctttcgAGTCGCAG...........AtCCCGGGTTCAAATCCCGGCCGGAGCA... tRNA-Glu-TTC-1-1 Sc: 74.9
Gln tRNAs
>>>>>>>...........................>..>..........<..<.>>>>>...........................................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGGT.........................CGTCTAGTGGCc.A.ATCTCCCAGGTAGAAAagaaaggtagggctagggattccaggctctggatctcatgaagagaaaagaaACCTGGAG...........ACAGCAGTTCGAATCTGCTCCGGGCTACCA tRNA-Gln-CTG-1-1 Sc: 70.9 >>>>>>>...........................>>>>..........<<<<.>>>>>...........................................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCCGGTggagggagagacctctttcccgccgAATGTAGTGGCcaA.GCATAGGGGCCTTTGG....................................................AGCCCTTG...........ACCCCAGTTCGAATCTGGGCCGGGCTA... tRNA-Gln-TTG-1-1 Sc: 72.6
Gly tRNAs
>>>>>>>..>>>>............<<<<.>>>>>.........................................................<<<<<...............>>>>>.........<<<<<<<<<<<<.... GCGACGGTCGTCCAGTTtGGTctA.GGACATCAGATTGCCA..................................................ATCTGGTA...........ACCCGGG..TTCAAATCCCGGCCGTCGCACCA tRNA-Gly-GCC-1-1 Sc: 76.9 >>>>>>>..>>>..............<<<.>>>>>.........................................................<<<<<...............>>>>>.........<<<<<<<<<<<<.... GCGGTCATGGTCTAGT..GGTt.A.TGACTCGGGCTTCCCA..................................................AGCCCGAT...........ACCCGGG..TTCGAATCCCGGTGACCGCA... tRNA-Gly-CCC-1-1 Sc: 76.4 >>>>>>>..>>>>............<<<<..>..>.........................................................<..<.................>>>>.........<<<<.<<<<<<<.... GCGGTCATCGTCTAGTTtGGTctA.GGACGCTGGCCTTCCAagcgcgttgcgcgcggagaaagcccgcgacccgggacccggtttttcaaaAGGAAATT...........GGGCGGGaaTTCGAATCCCGGTGACCGCACCA tRNA-Gly-TCC-1-1 Sc: 67.2
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCTTCGTAGTATAGCCtGGTgAGTATAGGCGGCTGTGGactgttctgaaattgtttcggcagacACCGCTTG...........AGGAGGGTTCAAATCCCTCCGAAGGCCCCA tRNA-His-GTG-1-1 Sc: 65.1
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGTTAGCTCAGCTtGGT.GGAGCGTTCGACTGATAATCGAAAG...........GtCGAGGGTTCAAATCCCTTACGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 88.7
Ile2 tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGCTCAGCCtGGTtAGAGCGACCGGCTCATAACCGGTCG...........GcCAAGGGTTCGAATCCCTTTGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 86.8
Leu tRNAs
>>>>>>>..>>>..................................<<<.>>>>>........................................................................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTCGCCCAGCTtGGCcaA.....................AGGCGTAAGACTGAGG................................................................C.TCTTATCCCGAAG....GGGTtCGTGGGTTCAAATCCCAT.CTCCCGCACCA tRNA-Leu-GAG-1-1 Sc: 71.8 >>>>>>>..>>>..................................<<<.>>>>..........................................................................<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTCGCCCAGCTtGGTcaA.....................AGGCGTGAGAC.CGGAtcagaaaattatctggcgcgatgctcagatgttagaccaactgggat.................A.CCTCATTCCTTAG....GGATtCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-CAG-1-1 Sc: 85.4 >>>>>>>..>>>..................................<<<.>>>>>........................................................................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTCGCCAAGCCcGGTcaA.....................CGGCGCAGGGCTTAGAatgggtatgcattagcccctaca.........................................A.CCCTGTTCCTTAG....GGATtCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 91.0 >>>>>>>..>>>..................................<<<.>.>>>........................................................................<<<.<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGAGGGGTAGCGAAGCCcGGTcaA.....................ACGCGCAGGACTCAAGatcaatgcgcatgcatgacgacatcagttactcccgcaacacctacacgagcgcgggatgagtgA.TCCCGTCCCTCAG....GGGTtCGTGGGTTCGAATCCCAC.CCCCTCCACCA tRNA-Leu-CAA-1-1 Sc: 77.1 >>>>>>>..>>....................................<<.>>>>>........................................................................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTTGTAGAGCCcGGCc.AaataggaaaaaaacaacttggAGACGCGGGACTTAAGatctcagaatgggtt.................................................A.TCCCGTCCCTCAG....GGGTcCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-TAA-1-1 Sc: 77.0
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTTCGTAGCTCAGCCaGGTAGAGCGTTTGGCTCTTAaccaatcagtgtatttcactggGTTAAAAT...........GtCGTGGGTCCGAATCCCACCGAACCCG... tRNA-Lys-CTT-1-1 Sc: 77.1 >>>>>>>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGTAGAGTACCGGACTTTTAactttctacaaaagaaagaa..ATCCGGTT...........GtCTCGGGTTCGAATCCCGACGGGCCCG... tRNA-Lys-TTT-1-1 Sc: 84.8
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCTtGGTtAGAGCGTACGACTCATAATCGTAAG...........GtCGCGGGCTCAAATCCCGCCTCCGGCA... tRNA-Met-CAT-1-1 Sc: 77.7
iMet tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>........................................<<<<<<<<<<<<.... AGCGGGGTGGGGAAGCCaGGTcATCCCGGCGGGCTCATAACCCGCAG...........AtCGGTGGTTCAAcaggatacacacacgtacttctatccggaaaat..CCACCCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 79.1
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGTCGTAGCTCAGCCtGGGAGAGCACTCCGCTGAAGACGGAGCC...........GtCGTGAGCTCAAATCTCACCGACGGCA... tRNA-Phe-GAA-1-1 Sc: 67.4
Pro tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCATAGTCTAGCTtGGA.AGGATGTCAGCCCGGGGCGCTGGAG...........GtCGTGGGTTCAAATCCCACTGGCCCCA... tRNA-Pro-GGG-1-1 Sc: 75.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTTGTCTAGCTtGGC.AGGATGCCAGCCTCGGGCGCTGGAG...........GtCGCTGGTTCGAATCCGGCCGGCCCCACCA tRNA-Pro-CGG-1-1 Sc: 86.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGTCGTTGTCTAGCTtGGTtAGGATGCCAGCCTTGGGCGCTGGAG...........GtCGCTGGTTCGAATCCGGCCGACCCCA... tRNA-Pro-TGG-1-1 Sc: 77.1
Ser tRNAs
>>>>>>>..>>>>..................................<<<<.>>>>>...................................<<<<<..>>>>............<<<<...>>>>>.......<<<<<<<<<<<<.... GCCGGGGTCGCCTAGCCcGGG......A...................GGGCGCAAGCCTGGAAaaattcatccagcc..............AGCTTGTGACCC..GTAA......GGGTCcCGAGGGTTCAAATCCCTCTCCCGGCGCCA tRNA-Ser-GGA-1-1 Sc: 80.7 >>>>>>>..>>>....................................<<<.>>>>>...................................<<<<<..>>>..............<<<...>>>>>.......<<<<<<<<<<<<.... GCTGAGGTACCCAAGCTaGGTa.....Agtcgtcctagaccctgaa.CGGGGTCAGCCTCGAGatcatacacacacttgacgtgct.....AGCTGATGTCC...TTCG.......GGACtCGTGGGTTCGAGTCCCACCCTCAGCG... tRNA-Ser-CGA-1-1 Sc: 62.9 >>>>>>>..>>>....................................<<<.>>>>>...................................<<<<<..>>>>>..........<<<<<...>>>>>.......<<<<<<<<<<<<.... GCGGACGTGGCAGAGT..GGTctctctActcgagacacaata.....ATGCGTCGGCCTTGAGtcggttactaccacatggcctgacagaaAGCCGATTCGCCCT........CGGGCGAtCAGGAGTTCAAATCTCCTCGTCCGCG... tRNA-Ser-TGA-1-1 Sc: 75.3 >>>>>>>..>>>>..................................<<<<.>>>>>...................................<<<<<..>>>..............<<<...>>>>>.......<<<<<<<<<<<<.... GCGGGGGTCGCCTAGCCtGGT......A...................GGGCGTGGGATTGCTA............................ATCCCATGTCC...GCAA.......GGACcCGTGGGTTCAAATCCCACTCCCCGCGCCA tRNA-Ser-GCT-1-1 Sc: 88.9
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTTGGTAGCTCAGCCtGGTAGAGCGTTACCTTGGTAAGGTAGAG...........GtCACGGGTCCAAATCCCGTCCAAGGCT... tRNA-Thr-GGT-1-1 Sc: 70.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCTAGTAGCTCAGCCtGGCAGAGCGAGGGTTTCGTAAACCCTAG...........GtCGTGGGTCCGAATCCCACCTAGGGCT... tRNA-Thr-CGT-1-1 Sc: 74.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCACGTAGCTCAGCCtGGCAGAGCGGCTGACTTGTAATCAGCAG...........GtCGTGGGTCCAAATCCCACCGTGACCT... tRNA-Thr-TGT-1-1 Sc: 78.9
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>........................................<<<<<................>>>>>.....................................<<<<<<<<<<<<.... GGGGTCGTAGCGAAGCCaGGCATCGCAACGGGCTCCAGatctaacaacaaatgggctagttagagaaagaaACCCGTGG...........GtCAAGGGTTCAAATggctgcggttaatcccgcgccaggacaaatCCCTTCGGCCCCA... tRNA-Trp-CCA-1-1 Sc: 68.9
Tyr tRNAs
>>>>>>>..>>>>.........<<<<.>>..>......................................................................................<..<<..>.>........<.<..>>.>..............<.<<<<<<<<<.... CCCGCTGTAGCTCAGCCtGGTAGAGCTTTCGGCTGTAGatgtcggctagcagagctgaccacgtgtagcagcctatcgggcgtacaggtagcagtaaccgaagagtcgcaggctcaaACAAAACCGGC........GACATGCCGTTTtggagCAAATCCTGCCGGCGGGA... tRNA-Tyr-GTA-1-1 Sc: 55.9
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGGGTGGTCTAGCTcGGT.ATGATACCTCGTTGACATCGAGGTG...........GtCGCGTGTTCAAATCACGCCTCGCCCA... tRNA-Val-GAC-1-1 Sc: 67.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGATGGGTAGTCTAGCCtGGTtAGGATACCTGTCTCACACACAGGTG...........GtCGAGAGTTCGAATCTCTCCCCATCCA... tRNA-Val-CAC-1-1 Sc: 71.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGGCTGGTCTAGCTcGGTtATGATACCGCTCTTACACAGCGGTG...........GtCGGGTGTTCAAATCACCCGCCGCCCA... tRNA-Val-TAC-1-1 Sc: 67.7
SeC tRNAs
Sup tRNAs