Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCTCGGTTGGCAACCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCACCA tRNA-Ala-GGC-1-1 Sc: 102.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCTCGGTTCGCACCCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCACCA tRNA-Ala-CGC-1-1 Sc: 100.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCTCGGTTTGCACCCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCACCA tRNA-Ala-TGC-1-1 Sc: 100.1
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCaGGAtAGGACGCCGGCCTGCGGAGCCGGTA...........GtCCGGGGTTCAAATCCCCGCGGGCCCGCCA tRNA-Arg-GCG-1-1 Sc: 96.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAtAGAGCGCCGGCCTCCGGAGCCGGAG...........GtCCCGGGTTCAAATCCCGGCGGGCCCGCCA tRNA-Arg-CCG-1-1 Sc: 107.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAtAGAGCGCCGGCCTTCGGAGCCGGTG...........GtCCCGGGTTCAAGTCCCGGCGGGCCCGCCA tRNA-Arg-TCG-1-1 Sc: 102.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGAtAGAGCGCCGGCCTCCTAAGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGGCCCGCCA tRNA-Arg-CCT-1-1 Sc: 108.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCCTAGCCaGGAtAGGGCGCCGGCCTTCTAAGCCGGTA...........GtCCGGGGTTCAAATCCCCGCGGGCCCGCCA tRNA-Arg-TCT-1-1 Sc: 101.7
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCTGGTAGAGCGCCGGGCTGTTAACCCGGTG...........GtCGGTGGTTCGAATCCACCCCCCGGCGCCA tRNA-Asn-GTT-1-1 Sc: 98.2
Asp tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTATAGCCcGGAccAGTATGCGGGCCTGTCAAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCGCCA tRNA-Asp-GTC-1-1 Sc: 98.0
Cys tRNAs
>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGCCCGAGCGGTcgA.AGGGGCGGGGCTGCAGtggcggctaccgttggtgtccgcccgtcgaaACCCCGTT....a.......AtCCCGGGTTCGAATCCCGGCCCCGGCTCCA tRNA-Cys-GCA-1-1 Sc: 79.5
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTATAGCCcGGTcaAGTATGCGGGCCTCTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCACCA tRNA-Glu-CTC-1-1 Sc: 101.0 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTATAGCCcGGTcaAGTATGCGGGCCTTTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCACCA tRNA-Glu-TTC-1-1 Sc: 100.3
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGCcaA.GGATGCGGGGCTCTGGCCCCCGTG...........ACCGGGGTTCGAATCCCCGCCCGGCTACCA tRNA-Gln-CTG-1-1 Sc: 87.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGCcaA.GGATGCGGGGCTTTGGCCCCCGTG...........ACCGGGGTTCGAATCCCCGCCCGGCTACCA tRNA-Gln-TTG-1-1 Sc: 86.6
Gly tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGActAGGACGCCGGCCTGCCAAGCCGGAG...........AtCCCGGGTTCAAATCCCGGCCGCCGCACCA tRNA-Gly-GCC-1-1 Sc: 102.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGActAGGACGCCGGCCTCCCAAGCCGGTG...........GtCCCGGGTTCAAATCCCGGCCGCCGCACCA tRNA-Gly-CCC-1-1 Sc: 102.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGActAGGACGCCGGCCTTCCAAGCCGGTA...........GtCCCGGGTTCAAATCCCGGCCGCCGCACCA tRNA-Gly-TCC-1-1 Sc: 98.5
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCTGGAAGAGCGCGGGACTGTGGATCCCGAG...........GtCCCGGGTTCAAATCCCGGCGGCGGCC... tRNA-His-GTG-1-1 Sc: 93.9
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCtGGTAGAGCGCCCGGCTGATAACCGGGAG...........GtCGGGGGTTCAAATCCCCCCGGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 109.5
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCcGGTAGAGCGCCCGGCTCATAACCGGGTG...........GtCGGGGGTTCAAATCCCCCCGGGCCCACCA tRNA-Ile2-CAT-1-1 Sc: 109.2
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>.....................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGTcaAAGGGGGCGGGCTGAGG..............................................................ACCCGCT.GGCGTAG.......GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-GAG-1-1 Sc: 98.1 >>>>>>>..>>>.............<<<.>>>>>.....................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGTcaAAGGGGGCGGGCTCAGG..............................................................ACCCGCT.GGCGTAG.......GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-CAG-1-1 Sc: 98.7 >>>>>>>..>>>>...........<<<<.>>>>>.....................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<<.... GGGCCCGTCGTCTAGCCtGGActAGGATGCGGGGTTCAGGgagcccggtcgggcccctgcccgactcgggaccccgaccccgcgcgtgcggcggggcgggacTCCCCGTG.................AtCCGGGGTTCAAATCCCCG.CGGGCCCACCA tRNA-Leu-CAG-2-1 Sc: 70.4 >>>>>>>..>>>.............<<<.>>>>>.....................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGTcaAAGGGGGCGGGCTTAGG..............................................................ACCCGCT.GGCGTAG.......GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 98.2 >>>>>>>..>>>.............<<<.>>>>>.....................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGTc.AAGGGGGCGGGCTCAAG..............................................................ACCCGCT.GGCGTAG.......GCCGgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-CAA-1-1 Sc: 100.3 >>>>>>>..>>>.............<<<.>>>>>.....................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGTccAAGGGGGCGGGCTTAAG..............................................................ACCCGCT.GGCGTAG.......GCCGgCGTGGGTTCAAATCCCAC.CCCCCGCACCA tRNA-Leu-TAA-1-1 Sc: 99.6
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGCAGAGCGGCGGGCTCTTAACCCGTAG...........GtCCCGGGTTCAAATCCCGGCCGGCCCGCCA tRNA-Lys-CTT-1-1 Sc: 107.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCcGGCAGAGCGGCGGGCTTTTAACCCGTTG...........GtCCCGGGTTCAAATCCCGGCCGGCCCGCCA tRNA-Lys-TTT-1-1 Sc: 105.7
Met tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCTGGCAGAGCGCCGGACTCATAcggtcggccggtccgctccgaggccgcctgggagATCCGGAG...........GtCCCGGGTTCAAATCCCGGCGGCGGCACCA tRNA-Met-CAT-1-1 Sc: 95.4
iMet tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTAGGGTAGCCtGGTAGCCCGCGGGGCTCATAACCCCGAG...........AtCGGTGGTTCAAATCCACCCCCCGCTACCA tRNA-iMet-CAT-1-1 Sc: 100.8 AGCGGGGTAGGGTAGCCtGGTAGCCCGCGGGGCTCATAACCCCGAG...........AtCGGTGGTTCAAATCCACCCCCCGCTACCA tRNA-iMet-CAT-1-2 Sc: 100.8
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCGGGA.GAGCGCCCGGCTGATCcgcacacccagtgaggggtgcggggccacagACCGGGAG...........GtCCGGGGTTCGAATCCCCGCGGCGGCACCA tRNA-Phe-GAA-1-1 Sc: 100.8
Pro tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTCGTCTAGCCtGGActAGGATGCCAGCCTGGGGcgtggagccccgcgccggggtccacccggatCGCTGGTG...........G.CCCGGGTTCAAATCCCGGCGGCCCCACCA tRNA-Pro-GGG-1-1 Sc: 81.9 >>>>>>>..>>>>...........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTCGTCTAGCCtGGActAGGATGCGGGGTTTGGG...............................TCCCCGTG...........AtCCGGGGTTCAAATCCCCGCGGCCCCACCA tRNA-Pro-TGG-1-1 Sc: 90.6
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>...................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGCctA.AGGGGCCGGCCTGGAG............................AGCCGGTGGGG..GgcTACc....CCCGCGCGGGTTCGAATCCCGC.CCCCGGCGCCA tRNA-Ser-GGA-1-1 Sc: 78.9 >>>>>>>..>>>..............<<<.>>>>>...................................<<<<<..>>>>>.........<<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGCccA.AGGGGGTGGGCTCGAGaccttttccggctacgagagggtgggagACCCACT.GCCCCG..TGCa..GGGGCGCGCGGGTTCGAATCCCGC.CCCCGGCGCCA tRNA-Ser-CGA-1-1 Sc: 74.2 >>>>>>>..>>>..............<<<.>>>>>...................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGCctA.AGGGGCCGGCCTTGAG............................AGCCGGTGGGG..Gc.TACc....CCCGCGCGGGTTCGAATCCCGC.CCCCGGCGCCA tRNA-Ser-TGA-1-1 Sc: 84.2 >>>>>>>..>>>>............<<<<.>>>>>...................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTCGCCTAGCCtGGCt.A.GGGCGCCGGCCTGCTA............................AGCCGGTGGGG..G..CAAc....CCCGCGCGGGTTCAAATCCCGC.CCCCGGCGCCA tRNA-Ser-GCT-1-1 Sc: 97.9
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCTGGC.A.GAGCGCCGCCCTGGTA................................AGGCGGAG...........GtCCCGGGTTCAAATCCCGGCGGCGGCTCCA tRNA-Thr-GGT-1-1 Sc: 99.5 >>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGC.GGGcA.GAGCGCCGGCCTCGTAacggccctggcctcgctccgaggtcgcgagagAGCCGGTG...........GtCCCGGGTTCAAGTCCCGGCGGCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 84.4 >>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGC.GGGcA.GAGCGCCGGCCTTGTAcggcctggcctcgctccgaggtcgcccaagagAGCCGGTG...........GtCCCGGGTTCAAGTCCCGGCGGCGGCTCCA tRNA-Thr-TGT-1-1 Sc: 85.0
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGCAGAGCGCCGGGCTCCAGacccgcccggtccgctccgggtctgtcgacccgtgcgcgggatgagagaggtctggcgcgggagagACCCGGAG...........GtCCGGGGTTCGAATCCCCGCGGGCCCACCA tRNA-Trp-CCA-1-1 Sc: 87.8
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..............................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCGCCGTAGCTCAGCGGTA.GAGCGCCCGGCTGTAGgggggaacccgcatccccctaaccccccacgcgcccaaccggcggcgagaagccgccggggatgagggcgcggcggcaaagggggatgcggggccgggcagaaACCGGGAG...........GtCCGGGGTTCGAATCCCCGCGGCGGGACCA tRNA-Tyr-GTA-1-1 Sc: 66.0
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTGACGAGGCGGAG...........GtCCGGGGTTCAAATCCCCGCGGGCCCACCA tRNA-Val-GAC-1-1 Sc: 100.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTCACACGGCGGAG...........GtCCGGGGTTCAAATCCCCGCGGGCCCACCA tRNA-Val-CAC-1-1 Sc: 98.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTTACAAGGCGGAG...........GtCCGGGGTTCAAATCCCCGCGGCCCCACCA tRNA-Val-TAC-1-1 Sc: 100.5
SeC tRNAs
Sup tRNAs