Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGTGTTCGGTTGGCATCCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 85.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGTGCTTGGCTCGCACCCAAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-CGC-1-1 Sc: 94.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGTGTTCGGCTTGCAACCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-TGC-1-1 Sc: 93.1
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTTAGCCaGGAcAGAGTGCTGGCCTGCGG.................AGCCAGTG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-GCG-1-1 Sc: 94.5 >>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTTAGCCaGGAcAGAGTGCCAGTCTCCGG.................AACTGGTG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-CCG-1-1 Sc: 89.0 >>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGCCaGGAcAGAGCGCTGGCCTTCGG.................AGCCAGTG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-TCG-1-1 Sc: 96.2 >>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGCCaGGAcAGAGCGCCGGCCTCCTAgtcggcgctgagaagacAGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-CCT-1-1 Sc: 91.8 >>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGCCaGGAcAGAGCGCCGGCCTTCTAgtcggcgctgagaagttAGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-TCT-1-1 Sc: 91.1
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGCTCAGTTGGCAGAGCGCCGGGCTGTTAaatccttacggacACCCGGTG...........GtCGGTGGTCCGAGTCCACCCCGCGGCG... tRNA-Asn-GTT-1-1 Sc: 70.0
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTCTAGCGGTctA.GGATGGGGGCCTGTCGAGCCCTTG...........ACCCGGGTTCAAATCCCGGCCGCGGCG... tRNA-Asp-GTC-1-1 Sc: 91.4
Cys tRNAs
>>>>>>>..>>>............<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGGCCGAGCGGTctA.AGGCGGCGGGCCGCAGagtataacacgctgagACCCGTTATT.........TtCGCGGGTTCAAATCCCGCCCCCGGCT... tRNA-Cys-GCA-1-1 Sc: 68.1
Glu tRNAs
>>>>>>>..>>>>...........................<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTACAGCCcGGTcAagcttaatgcgccggtaGTATGCGGGCCTCTCAAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCA... tRNA-Glu-CTC-1-1 Sc: 95.9 >>>>>>>..>>>>...........................<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTATAGCCcGGTcAagtgtaatgcgccgataGTATGCGGGCCTTTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCA... tRNA-Glu-TTC-1-1 Sc: 94.6
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGTcaA.GGATCCAGGGCTCTGGCCCCTGGG...........ACCAGGGTTCGAGTCCCTGCCCGGCTA... tRNA-Gln-CTG-1-1 Sc: 69.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGTcaA.GGATCCAGGGCTTTGGCCCCTGGG...........ACCAGGGTTCGAGTCCCTGCCCGGCTA... tRNA-Gln-TTG-1-1 Sc: 68.3
Gly tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGCCtGGAttAGGACGCCTGCCTGCCA...............CGCAGGAG...........GtCCCGGGTTCAAATCCCGGCGGTCGCA... tRNA-Gly-GCC-1-1 Sc: 88.9 >>>>>>>..>>>>...........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTCGTCTAGTCtGGAttAGGACGCTGGCCTCCCAttctttagagtggaaAGCCAGCA...........AtCCCGGGTTCGAATCCCGGCGGCCGCA... tRNA-Gly-CCC-1-1 Sc: 78.7 >>>>>>>..>>>>...........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTCGTCTAGTCtGGAttAGGACGCTGGCCTTCCAttagtcagagaggaaAGCCAGCA...........AtCCCGGGTTCGAATCCCGGCGGCCGCA... tRNA-Gly-TCC-1-1 Sc: 77.9
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTCGGGTAGCTCAGCCtGGTtAGAGCGATGGGCTGTGGACCCATAG...........GtCCCGGGTTCAAGTCCCGGCCCGAGCC... tRNA-His-GTG-1-1 Sc: 87.4
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGCCtGGTAGAGCGTCCGGCTGATA..................ACCGGAAG...........GcCGTGGGTTCAAATCCCACCGGGCCCA... tRNA-Ile-GAT-1-1 Sc: 100.3
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGCCcGGTAGAGCGCCCGGCTCATAaactatatacgtggagagACCGGGTG...........GtCCGGGGTTCAAGTCCCCGCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 92.0
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>.........................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCAaGGTcaAAGGGGGCGGACTGAGG..................CTCCGCTGGTGTAG....GCCTgCGTGGGTTCAAGTCCCAC.CCCCCGCA... tRNA-Leu-GAG-1-1 Sc: 76.9 >>>>>>>..>>>.............<<<.>>>>>.........................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCAaGGTcaAAGGGGTCGGGCTCAGGaccatatggtgagac...CCCCGATGGTGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-CAG-1-1 Sc: 75.6 >>>>>>>..>>>.............<<<.>>>>>.........................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCAaGGTcaAAGGGGTCGGGCTTAGGaccccaaacgggtaagatCCCCGATGGTGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-TAG-1-1 Sc: 74.8 >>>>>>>..>>>.............<<<.>>>>>.........................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCT.GGTcaAAGGGGGCGGACTCAAG..................ATCCGCTGGCGAAG....GCCTaCGCGGGTTCAAATCCCGT.CCCCCGCA... tRNA-Leu-CAA-1-1 Sc: 83.6 >>>>>>>..>>>.............<<<.>>>>>.........................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCA.GGTcaAAGGGGGCGGACTTAAG..................ATCCGCTGGCGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-TAA-1-1 Sc: 85.0
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGTAGAGCGGCGGGCTCTTAatctaagccgtatcaaggtagaggggatACCCGTAG...........GtCCCGGGTTCAAATCCCGGCGGGCCCG... tRNA-Lys-CTT-1-1 Sc: 95.6 >>>>>>>..>>>>.........<<<<.>>>>>...................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGTAGAGCGGCGGGCTTTTAaccgcgggtcgcgcgggaagcg......ACCCGTAG...........GtCCCGGGTTCAAATCCCGGCGGGCCCG... tRNA-Lys-TTT-1-1 Sc: 94.8
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCtGGTtAGAGCGCCGGACTCATAcggtgatataaatctgggatATCCGGTT...........GtCCGGGGTTCAAATCCCCGCGGCGGCA... tRNA-Met-CAT-1-1 Sc: 92.0
iMet tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGCGTAGGGAAGCCtGGTATCCCGCAGGGCTCATAACCCTGAG...........GtCCCTGGTTCAAATCCAGGCGCCGCTA... tRNA-iMet-CAT-1-1 Sc: 90.3
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCcGGGAGAGCGCCCGGCTGAAGtttttaatactcgcagtgACCGGGTT...........GtCCGGGGTTCAAGTCCCCGCGGCGGCA... tRNA-Phe-GAA-1-1 Sc: 83.7
Pro tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTAGTCTAGCTtGGActAGGATGCCAGCCTGGGGatatttccctaaccaccagtaCGCTGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCCCA... tRNA-Pro-GGG-1-1 Sc: 83.1 >>>>>>>..>>>>...........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTGGTCTAGCTaGGAttAGGATGCGGCGTTCGGG.....................TCGCCGTG...........GtCCCGGGTTCAAATCCCGGCGGGCCCA... tRNA-Pro-CGG-1-1 Sc: 85.1 >>>>>>>..>>>>...........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTAGTCTAGCTtGGActAGGATGCCAGGCTTGGG.....................CCCTGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCCCA... tRNA-Pro-TGG-1-1 Sc: 90.2
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>................................<<<<<...>>...............<<.....>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGActA.AGGGGCTGGCCTGGAG.........................AGCCAGTGTGG....GTCT.......TCCAcgCGCGGGTTCAAATCCCGC.CCCCGGCG... tRNA-Ser-GGA-1-1 Sc: 79.3 >>>>>>>..>>>..............<<<.>>>>>................................<<<<<..>>>>>...........<<<<<....>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGActA.AGGGGGTAGGCTCGAGaccatttccagcgttaaggcgggcgACCTACT.GCCTCTC........CGAGGCA..CGCGGGTTCAAATCCCGC.CCCCGGCG... tRNA-Ser-CGA-1-1 Sc: 73.9 >>>>>>>..>>>..............<<<.>>>>>................................<<<<<..>>>...............<<<....>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGTccA.AGGGGCTGGCCTTGAG.........................AGCCAGTAGGG....TTAT.......CCCTg.CGTGGGTTCAAATCCCAC.CCCCGGCG... tRNA-Ser-TGA-1-1 Sc: 83.7 >>>>>>>..>>>>............<<<<.>>>>>................................<<<<<..>>>...............<<<....>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTCGCCTAGCTcGGT..A.GGGCGGAGGCCTGCTA.........................AGCCTCTGGGGTCC.........CACCCCG..CGCGGGTTCAAATCCCGC.CCCCGGCGCCA tRNA-Ser-GCT-1-1 Sc: 90.3
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGCTCAGCCtGGCtAGAGCGTTGCCCTGGTA...........................AGGCAAAG...........GtCCCGGGTTCAAATCCCGGCCGCGGCT... tRNA-Thr-GGT-1-1 Sc: 93.4 >>>>>>>..>>>>..........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCAcGGTcAGAGCGCTGGCCTCGTAaggcctaagtaagaagtgatccaggacAGCCAGTG...........GtCCCGGGTTCAAATCCCGGCGGCGGCT... tRNA-Thr-CGT-1-1 Sc: 88.9 >>>>>>>..>>>>..........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCAcGGCcAGAGCGCTGGCCTTGTAaggatggcttcaggac...........AGCCAGTG...........GtCCCGGGTTCAAATCCCGGCGGCGGCT... tRNA-Thr-TGT-1-1 Sc: 86.5
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGCTCAGCCaGGTAGAGTGCCGGGCTCCAGatgagctgcattgggtcttaagacccccttgttgggggatgatatagatctggaggagagACCCGGTG...........GtCCGGGGTTCAAGTCCCCGTGGGCCCA... tRNA-Trp-CCA-1-1 Sc: 86.6
Tyr tRNAs
>>>>>>>..>>>>............<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCGCCGTAGCTCAGCCcGGTtctAGAGCGCCCGGCTGTAGgttaggagggcagttACCGGGTG...........GtCCGGGGTTCAAGTCCCCGCGGCGGGA... tRNA-Tyr-GTA-1-1 Sc: 84.3
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCTGCCCTGACGCGGCAGAA...........AtCCTGGGTTCAAGTCCCAGCGGGCCCA... tRNA-Val-GAC-1-1 Sc: 82.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGTCTAGTCtGGTtAGGACGCTGCCCTCACACGGCAGAA...........GtCCCGAGTTCAAATCTCGGCGGGCCCA... tRNA-Val-CAC-1-1 Sc: 86.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGTCGCCCTTACAAGGCGGAG...........GtCCTGGGTTCAAATCCCAGCGGGCCCA... tRNA-Val-TAC-1-1 Sc: 89.5
SeC tRNAs
Sup tRNAs