Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGTGCTCGGTTGGCATCCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 91.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGTGCTCGGTTCGCACCCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-CGC-1-1 Sc: 93.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGTGCTCGGTTTGCACCCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-TGC-1-1 Sc: 93.0
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGCCaGGAcGGAGCGCCGGCCTGCGG...............AGCCGGCG...........AtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-GCG-1-1 Sc: 91.1 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGTCaGGAcGGAGCGCCGGCCTCCGG...............AGCCGGCG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-CCG-1-1 Sc: 89.8 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGCTaGGAtGGAGCGCCGGCCTTCGG...............AGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-TCG-1-1 Sc: 91.4 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGCCaGGAtAGAGCGCCGGCCTCCTAactttcggaagaa..AGCCGGTG...........GtCGCGGGTTCGAATCCCGCCGGGTCCG... tRNA-Arg-CCT-1-1 Sc: 90.4 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCGTAGCTCAGCCaGGAcGGAGCGCCGGCCTTCTAgcgtctaagggggatAGCCGGCG...........GtCCCGGGTTCAAATCCCGGCGGGTCCG... tRNA-Arg-TCT-1-1 Sc: 85.0
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.....................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGAGTAGCTCAGTTGGCAGAGCGCCCGGCTGTTAtgccgggtgcagaaACCGGGTG...........GtCGGAGGTTCGAGTCCTCCCTCCGGCG... tRNA-Asn-GTT-1-1 Sc: 69.2
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGTCTAGTGGTctA.GGATGGGGGCCTGTCGAGCCCCTG...........ACCCGGGTTCAAATCCCGGCCGCGGCG... tRNA-Asp-GTC-1-1 Sc: 89.1
Cys tRNAs
>>>>>>>..>>>............<<<.>..................................................<..................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGGCCGAGCGGTctA.AGGCGGCACTACCAgcccatcggtagcgctaggggccgcagtggtattagttgACACC.CGTTAT.......TtCGCGGGTTCAAATCCCGCCCCCGGCT... tRNA-Cys-GCA-1-1 Sc: 69.8
Glu tRNAs
>>>>>>>..>>>>..........................<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTGGTTTAGCCcGGTcAagcgcaggcaccgaaaGAATGCGGGCCTCTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCACCA tRNA-Glu-CTC-1-1 Sc: 103.7 >>>>>>>..>>>>..........................<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGGTGGTTTAGCCcGGTcAagcgcaggcaccgaaaGAATGCGGGCCTTTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCCGCGGCA... tRNA-Glu-TTC-1-1 Sc: 97.2
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTAGTCTAGTGGTcaA.GGATCCAGGGCTCTGGCCCCTGGG...........ACCAGGGTTCGAATCCCTGCCCGGCTA... tRNA-Gln-CTG-1-1 Sc: 75.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTAGTCTAGTGGTcaA.GGATCCAGGGCTTTGGCCCCTGGG...........ACCAGGGTTCGAATCCCTGCCCGGCTA... tRNA-Gln-TTG-1-1 Sc: 74.3
Gly tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGCCtGGAttAGGACGCCTGCCTGCCACGCAGGAG...........GtCCCGGGTTCAAATCCCGGCGGCCGCA... tRNA-Gly-GCC-1-1 Sc: 94.9 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGGCtGGAttAGGACGCCGGCCTCCCAAGCCGGTG...........AtCCCGGGTTCAAATCCCGGCGGCCGCA... tRNA-Gly-CCC-1-1 Sc: 94.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCCGTAGTCTAGGCtGGAttAGGACGCCGGCCTTCCAAGCCGGTG...........AtCCCGGGTTCAAATCCCGGCGGCCGCA... tRNA-Gly-TCC-1-1 Sc: 94.1
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTCGGGTAGCTCAGCCtGGAAGAGCGCCGGGCTGTGGACCCGGAA...........GtCCCGGGTTCAAATCCCGGCCCGAGCC... tRNA-His-GTG-1-1 Sc: 93.4
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGCTtGGTGGAGCGCCCGGCTGATAgggtgctcagaaACCGGGAG...........GtCACGGGTTCAAATCCCGTCGGGCCCA... tRNA-Ile-GAT-1-1 Sc: 87.9
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGCTcGGTAGAGCGCTCGGCTCATAACCGAGTG...........GtCAGGGGTTCAAATCCCCTCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 95.9
Leu tRNAs
>>>>>>>..>>>.................<<<.......>>>>>......................<<<<<..>>>...........<<<...>>>>>.......<<<<<..<<<<<<<.... GCGGGGGTGCCCGAGTCaGGGcaA....AGGG......GGCGGACTGAGG...............CTCCGCT.GGCGAAG.......GCCTgCGCGGGTTCAAATCCCGT..CCCCCGCA... tRNA-Leu-GAG-1-1 Sc: 78.7 >>>>>>>..>>>.................<<<.......>>>>>......................<<<<<..>>>...........<<<...>>>>>.......<<<<<..<<<<<<<.... GCGGGGGTGCCCGAGCTaGGTcgA....AGGG......GGTAGGCTCAGG...............CCCTACT.GGCGAAG.......GCCTtCGCGGGTTCAAATCCCGC..CCCCCGCA... tRNA-Leu-CAG-1-1 Sc: 82.7 >>>>>>>..>>>.................<<<.......>>>>>......................<<<<<..>>>...........<<<...>>>>>.......<<<<<..<<<<<<<.... GCGGGGGTGCCCGAGCTaGGTcaA....AGGG......GGCAGGCTTAGG...............CCCTGCT.GGCGAAG.......GCCTgCACGGGTTCAAATCCCGT..CCCCCGCA... tRNA-Leu-TAG-1-1 Sc: 80.5 >>>>>>>..>>>.................<<<.......>>>>>......................<<<<<..>>>...........<<<...>>>>>.......<<<<<..<<<<<<<.... GCGGGGGTGCCCGAGCT.GGTcaA....AGGG......GGCGGACTCAAGaccctttagtaagagATCCGCT.GGCGAAG.......GCCTtCGCGGGTTCAAATCCCGT..CCCCCGCA... tRNA-Leu-CAA-1-1 Sc: 76.4 >..>>....>>>.................<<<.......>>>>>......................<<<<<......................>>>>>.......<<<<<....<<..<.... GG.GTCTTAGGG......GGT..G....TCCCcctaat.CAGGCCTTTCG...............AGCCTGTG.................A.CCCGGGTTCAAATCCCGG..CCGCGGCA... tRNA-Leu-CAA-2-1 Sc: 37.5 >>>>>>>..>>>.................<<<.......>>>>>......................<<<<<..>>>...........<<<...>>>>>.......<<<<<..<<<<<<<.... GCGGGGGTGCCCGAGCCtGGTcaA....AGGG......GGCGGACTTAAGacccccaagtaagagATCCGCT.GGCGAAG.......GCCTgCACGGGTTCGAATCCCGT..CCCCCGCA... tRNA-Leu-TAA-1-1 Sc: 79.7
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGCCaGGTAGAGCGACGGGCTCTTAaccatgtaagaaaagcggagat.ACCCGTAG...........GtCCCGGGTTCGAATCCCGGCGGGCCCG... tRNA-Lys-CTT-1-1 Sc: 93.7 >>>>>>>..>>>>.........<<<<.>>>>>..............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGTAGAGCGGCGGGCTTTTAaccgcaaagggttgcggaaagcaACCCGTAG...........GtCCCGGGTTCGAATCCCGGCGGGCCCG... tRNA-Lys-TTT-1-1 Sc: 94.1
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCtGGTtAGAGCGCCGGACTCATAcgcgtaatatctgggaaATCCGGTT...........GtCCGGGGTTCAAATCCCCGCGGCGGCA... tRNA-Met-CAT-1-1 Sc: 92.1
iMet tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTGGGCTAGCCtGGTaAGGCCGCGGGGCTCATAtactctttaaagcacgcgttgggaaACCCCGAG...........GtCCCTGGTTCAAATCCAGGCCCCGCTACCA tRNA-iMet-CAT-1-1 Sc: 94.0
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCcGGGAGAGCGCCCGGCTGAAGACCGGGTT...........GtCCGGGGTTCAAGTCCCCGCGGCGGCA... tRNA-Phe-GAA-1-1 Sc: 90.8
Pro tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTAGTCTAGCTtGGActAGGATGCCAGCCTGGGGatactaccctaaccaccagaaCGCTGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCCCA... tRNA-Pro-GGG-1-1 Sc: 83.1 >>>>>>>..>>>>...........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCCGTGGTCTAGCCtGGActAGGATGCGACGTTCGGG.....................TCGTCGTG...........GtCCCGGGTTCAAATCCCGGCGGACCCA... tRNA-Pro-CGG-1-1 Sc: 80.6 >>>>>>>..>>>>...........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTAGTCTAGCCtGGActAGGACGCCAGGCTTGGG.....................CCCTGGTG...........AtCGCGGGTTCAAATCCCGCCGGCCCCA... tRNA-Pro-TGG-1-1 Sc: 93.0
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>...............................<<<<<..>>>................<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGActA.AGGGGCTGGCCTGGAG........................AGCCAGTGGGG....GTTTc.......CCCG.CACGGGTTCAAATCCCGT.CCCCGGCG... tRNA-Ser-GGA-1-1 Sc: 84.2 >>>>>>>..>>>..............<<<.>>>>>...............................<<<<<..>>>>>............<<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGTc.A.AGGGGGTAGGCTCGAGacctttccagcgttactgcgagggACCTACT.GCCTCTC.........TGAGGCA.CACGGGTTCGAATCCCGT.CCCCGGCG... tRNA-Ser-CGA-1-1 Sc: 71.5 >>>>>>>..>>>..............<<<.>>>>>...............................<<<<<..>>>................<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGT..GGTccA.AGGGGCTGGCCTTGAG........................AGCCAGTAGGC....GTAAa.......GCCTgCGCGGGTTCAAATCCCGT.CCCCGGCG... tRNA-Ser-TGA-1-1 Sc: 84.3 >>>>>>>..>>>>............<<<<.>>>>>...............................<<<<<..>>>................<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGAGGTCGCCTAGCCaGGT..A.GGGCGGCGGCCTGCTA........................AGCCGCTGGGGATT..........CTCCCCA.CGCGGGTTCAAATCCCGC.CCTCGGCG... tRNA-Ser-GCT-1-1 Sc: 87.8
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGCTCAGCCtGGCcAGAGCGCTGCCCTGGTA...............AGGCAGAG...........GtCCCGGGTTCAAATCCCGGCCGCGGCT... tRNA-Thr-GGT-1-1 Sc: 96.3 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCtGGTtAGAGCGCCGGCCTCGTAcccaaagtgagat..AGCCGGCG...........GtCGCGGGTTCGAATCCCGCCGGCGGCT... tRNA-Thr-CGT-1-1 Sc: 91.2 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCtGGTtAGAGCGCCGGCCTTGTAagttactgcctagatAGCCGGCG...........GtCGCGGGTTCGAATCCCGCCGGCGGCT... tRNA-Thr-TGT-1-1 Sc: 90.4
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>........................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTTAGCCaGGTAGAGTGCTGGGCTCCAGatattaatgctagacattgggtctaaagaccctttatggggatgaagtgtatctggagaggagagACCCAGTG...........GtCGCGGGTTCGAGTCCCGCCGGGCCCA... tRNA-Trp-CCA-1-1 Sc: 87.5
Tyr tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCGCCGTAGCTCAGCCcGGTttAGAGCGCCCGGCTGTAGataggggacagtaACCGGGTG...........GtCCGGGGTTCAAGTCCCCGCGGCGGGA... tRNA-Tyr-GTA-1-1 Sc: 84.7
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGTCGCCCTGACACGGCGGAG...........GtCCTGGGTTCAAATCCCAGCGGGCCCA... tRNA-Val-GAC-1-1 Sc: 87.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTCACACGGCGGAG...........AtCCTGGGTTCAAATCCCAGCGGGCCCA... tRNA-Val-CAC-1-1 Sc: 92.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCTGCCCTTACGAGGCAGAG...........GtCCTGGGTTCAAATCCCAGCGGGCCCA... tRNA-Val-TAC-1-1 Sc: 93.1
SeC tRNAs
Sup tRNAs