Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCTCGGTTGGCA..............................TCCGAGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-GGC-1-1 Sc: 92.4 >>>>>>>..>>>>.........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCT.GGAAGAGCGCCGCCCTCGCA..............................CGGCGGAG...........GtCCCGGGTTCAAATCCCGGCCGGTCCA... tRNA-Ala-CGC-1-1 Sc: 92.4 >>>>>>>..>>>>.........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGCCtGGAAGAGCGCCGCCCTTGCAaggccttagcttcaaccgaggtcgcaggagAGGCGGAG...........GtCCCGGGTTCAAGTCCCGGCCGGTCCA... tRNA-Ala-TGC-1-1 Sc: 87.6
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGCCTAGCTtGGAtAGGGCGCCGGCCTGCGGAGCCGGAG...........GaCCCGGGTTCAAGTCCCGGCGGGCCCG... tRNA-Arg-GCG-1-1 Sc: 88.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGCCTAGCCaGGAtAGGGCGCCGGCCTCCGGAGCCGGAG...........GtCCCGGGTTCAAGTCCCGGCGGGCCCG... tRNA-Arg-CCG-1-1 Sc: 90.7 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGCCTAGCTtGGAtAGGGCGCCGGCCTTCGGAGCCGGAG...........GtCCCGGGTTCAAGTCCCGGCGGGCCCG... tRNA-Arg-TCG-1-1 Sc: 89.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGCCTAGCCaGGAtAGGGCGCCGGCCTCCTAAGCCGGAG...........GcCCGGGGTTCGAATCCCCGCGGGCCCG... tRNA-Arg-CCT-1-1 Sc: 94.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGCCTAGCCaGGAtAGGGCGCCGGCCTTCTAAGCCGGAG...........GcCCGGGGTTCGAATCCCCGCGGGCCCG... tRNA-Arg-TCT-1-1 Sc: 95.0
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTAGCTCAGCCtGGTAGAGCGCCGGGCTGTTAaccgcgttaggtagcctggtggaaACCCGGTG...........GtCCGGGGTTCGAGTCCCCGCCCCGGCG... tRNA-Asn-GTT-1-1 Sc: 89.9
Asp tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGTATAGCCcGGTctAGTATGCGGGCCTGTCGAGCCCGTG...........ACCCGGGTTCAAATCCCGGCGGCGGCG... tRNA-Asp-GTC-1-1 Sc: 93.1
Cys tRNAs
>>>>>>>..>>>............<<<.>>>>>.................................<<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCGGGGTGGCCGAGCGGTctA.AGGCGGCGGGCTGCAGggcgctctcgagtcaggggctcagagACCCGTTT....a.......AcCGCGGGTTCGAATCCCGCCCCCGGCT... tRNA-Cys-GCA-1-1 Sc: 76.1
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<..........>.>>>.............<<<.<..>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGTATAGCCcGGTcaAGTATGCGGGCCTCTCGAGCCCGTGacaccctaGGCCCGTGAGGg...TGcGGGACACCCGGGTTCAAATCCCGGCGGCGGCA... tRNA-Glu-CTC-1-1 Sc: 94.9 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...................................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGTATAGCCcGGTcaAGTATGCGGGCCTTTCGAGCCCGTG...............................ACCCGGGTTCAAATCCCGGCGGCGGCA... tRNA-Glu-TTC-1-1 Sc: 94.2
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>....................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGCcaA.GGATGCGGGGCTCTGGgtcgccagggatttccctggcgaggggagCCCCCGTG...........ACCGGGGTTCGAATCCCCGCCCGGCTA... tRNA-Gln-CTG-1-1 Sc: 73.3 >>>>>>>..>>>>..........<<<<.>>>>>....................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGCCGGGTCGTCTAGCGGCcaA.GGATGCGGGGCTTTGGtcctcacacagggaggag...........ACCCCGTG...........ACCGGGGTTCGAATCCCCGCCCGGCTA... tRNA-Gln-TTG-1-1 Sc: 76.1
Gly tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGActAGGACGCCGGCCTGCCACGCCGGAA...........AtCCCGGGTTCAAATCCCGGCCGCCGCA... tRNA-Gly-GCC-1-1 Sc: 90.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGAatAGGACGCCGGCCCCCCAAGCCGGAG...........AtCCCGGGTTCAAATCCCGGCCGCCGCA... tRNA-Gly-CCC-1-1 Sc: 90.7 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGCGGTCGTCTAGCCtGGActAGGACGCCGGCCTTCCAAGCCGGAA...........AtCCCGGGTTCAAATCCCGGCCGCCGCA... tRNA-Gly-TCC-1-1 Sc: 93.3
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGGTAGCTCAGCCtGGTAGAGCGCCGGGCTGTGGacggcccctaataggggccggcacagACCCGGAG...........GtCCCGGGTTCAAATCCCGGCCCGGGCC... tRNA-His-GTG-1-1 Sc: 93.1
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCTtGGTGGAGCGCCCGGCTGATAACCGGGAG...........GtCCGGGGTTCGAATCCCCGCGGGCCCA... tRNA-Ile-GAT-1-1 Sc: 97.0
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCcGGTAGAGCGCCCGGCTCATAACCGGGTG...........GtCGGGGGTTCGAATCCCCCCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 102.5
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>....................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCTaGGTcaAAGGGGCCGGGTTGAGG.............ACCCGGTGGCGTAG....GCCTgCGTGGGTTCGAATCCCAC.CCCCCGCA... tRNA-Leu-GAG-1-1 Sc: 89.2 >>>>>>>..>>>.............<<<.>>>>>....................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCTaGGTcaAAGGGGTCGGGCTCAGG.............ACCCGATGGCGTAG....GCCTgCGTGGGTTCGAATCCCAC.CCCCCGCA... tRNA-Leu-CAG-1-1 Sc: 89.8 >>>>>>>..>>>.............<<<.>>>>>....................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCTaGGTcaAAGGGGTCGGGCTTAGG.............ACCCGATGGCGTAG....GCCTgCGTGGGTTCGAATCCCAC.CCCCCGCA... tRNA-Leu-TAG-1-1 Sc: 89.1 >>>>>>>..>>>.............<<<.>>>>>....................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGCcaAAGGGGGCGGACTCAAGtagcccaggggagATCCGCTGGTGTAG....GCCTgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-CAA-1-1 Sc: 79.2 >>>>>>>..>>>.............<<<.>>>>>....................<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGCCCGAGCCaGGCcaAAGGGGGCGGACTTAAG.............ATCCGCTGGTGTAG....ACCTgCGTGGGTTCAAATCCCAC.CCCCCGCA... tRNA-Leu-TAA-1-1 Sc: 87.9
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCtGGTAGAGCGGCGGGCTCTTAACCCGTAG...........GtCCCGGGTTCAAATCCCGGCGGGCCCG... tRNA-Lys-CTT-1-1 Sc: 103.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCTtGGTAGAGCGGCGGGCTTTTAACCCGTAG...........GtCCCGGGTTCAAATCCCGGCGGGCCCG... tRNA-Lys-TTT-1-1 Sc: 100.2
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCcGGCtAGAGCGCCGGACTCATAcgggtggtacgtcaccgaggttggtggcccaggggagATCCGGTT...........GtCCCGGGTTCAAATCCCGGCGGCGGCA... tRNA-Met-CAT-1-1 Sc: 90.5
iMet tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCGGGGTAGGGCAGCCaGGTAGCCCGCGGGGCTCATAACCCCGAG...........GtCGGTGGTTCAAATCCACCCCCCGCTA... tRNA-iMet-CAT-1-1 Sc: 95.9
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCTGGGAGAGCGCCCGGCTGAAGACCGGGAT...........GtCCGGGGTTCAAGTCCCCGCGGCGGCA... tRNA-Phe-GAA-1-1 Sc: 86.5
Pro tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTCGTCTAGCCtGGCtAGGATGCCGGCCTGGGGggataccccgcctagccgggttgtcccggagCGCCGGTG...........GtCCCGGGTTCAAATCCCGGCGGCCCCA... tRNA-Pro-GGG-1-1 Sc: 81.1 >>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTGGTCTAGCCtGGTtAGGATGCGGGGTTCGGG...............................TCCCCGTG...........AcCCGGGGTTCAAATCCCCGCGGGCCCA... tRNA-Pro-CGG-1-1 Sc: 90.2 >>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTAGTCTAGCCtGGCtAGGATGCGGGGCTTGGG...............................CCCCCGTG...........AcCCGGGGTTCAAATCCCCGCGGCCCCA... tRNA-Pro-TGG-1-1 Sc: 93.0
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.........................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGCctA.AGGGGCTGGCCTGGAG..................AGCCAGTGCCCC.ATAC....GGGGTgCGCGGGTTCGAATCCCGC.CCCCGGCG... tRNA-Ser-GGA-1-1 Sc: 83.9 >>>>>>>..>>>..............<<<.>>>>>.........................<<<<<..>>>>>.......<<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGCctA.AGGGGGTAGGCTCGAGttccggctagagcgagagACCTACT.GCCCCATAC...GGGGCA.CGCGGGTTCGAATCCCGC.CCCCGGCG... tRNA-Ser-CGA-1-1 Sc: 73.1 >>>>>>>..>>>..............<<<.>>>>>.........................<<<<<..>>.............<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGCCCGAGC..GGCctA.AGGGGCTGGCCTTGAG..................AGCCAGTGGGC..TTACg....CCCG.CGCGGGTTCGAATCCCGC.CCCCGGCG... tRNA-Ser-TGA-1-1 Sc: 83.5 >>>>>>>..>>>>............<<<<.>>>>>.........................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTCGCCTAGCCtGGT..A.GGGCGCCGGCCTGCTA..................AGCCGGTGGGG..GAAAc....CCCG.CGCGGGTTCAAATCCCGC.CCCCGGCG... tRNA-Ser-GCT-1-1 Sc: 97.8
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCGGTAGCTCAGCCtGGTGGAGCGCTGCCCTGGTA...........................AGGCAGAG...........GtCCCGGGTTCGAATCCCGGCCGCGGCT... tRNA-Thr-GGT-1-1 Sc: 95.2 >>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCgGGTAGAGCGCCGGCCTCGTAtggctacggtgtagccgaggtcgggagAGCCGGTG...........GaCGCGGGTTCAAATCCCGCCGGCGGCT... tRNA-Thr-CGT-1-1 Sc: 95.2 >>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCGTAGCTCAGCCgGGTAGAGCGCCGGCCTTGTAagccccctttcctaaggcccgggaa..AGCCGGTG...........GtCGCGGGTTCAAGTCCCGCCGGCGGCT... tRNA-Thr-TGT-1-1 Sc: 90.6
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCCaGGCAGAGCGGCGGGCTCCAGatccaaactatgggtcagacgacccctcgggggatgagttagatctggagggagtgACCCGTAG...........GtCGGGGGTTCAAATCCCCCCGGGCCCA... tRNA-Trp-CCA-1-1 Sc: 91.2
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCGCCGTAGCTCAGCGGCA.GAGCGCCCGGCTGTAGgggttacccgcccaccaaactacccgccctggggttggatgagggtgggtcggcagttACCGGGTG...........GtCGGGGGTTCAAGTCCCCCCGGCGGGA... tRNA-Tyr-GTA-1-1 Sc: 77.6
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTGACA..............CGGCGGAG...........GtCCGGGGTTCAAGTCCCCGCGGGCCCA... tRNA-Val-GAC-1-1 Sc: 87.9 >>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTaTGGACGCCGCCCTCACA..............CGGCGGAG...........GtCCGGGGTTCGAATCCCCGCGGGCCCA... tRNA-Val-CAC-1-1 Sc: 88.8 >>>>>>>..>>>>..........<<<<.>>>>>.....................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTCGTCTAGCCtGGTtAGGACGCCGCCCTTACAagcaaggctaggagAGGCGGAG...........GcCCGGGGTTCAAGTCCCCGCGGGCCCA... tRNA-Val-TAC-1-1 Sc: 83.3
SeC tRNAs
Sup tRNAs