Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCATTAGCTCAGCTGGGAGAGCACAACGCTGGCAGCGTTGGG...........GtCAGCGGTTCGAACCCGCTATGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 74.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGAATTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTATTCTCCACCA tRNA-Ala-TGC-1-1 Sc: 81.0 GGGGAATTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTATTCTCCACCA tRNA-Ala-TGC-1-2 Sc: 81.0 GGGGAATTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTATTCTCCACCA tRNA-Ala-TGC-1-3 Sc: 81.0
Arg tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>........<<<<<...................>>>>>.......<<<<<..<<<<<<<.... GCGCTCATAGCTCAGCTGGAt.A.GAGCATTTGATTGCGGT.TCAAAAG..............GcCAGAGGTTCGAATCCTCT..TGAGCGCACCA tRNA-Arg-GCG-1-1 Sc: 78.0 >>>>>>>..>>>>...........<<<<.>>>>>........<<<<<...................>>>>>.......<<<<<..<<<<<<<.... GCGCTCGTAGCTCAACTGGAt.A.GAGCGACAGACTTCGGA.TCTGTAG..............GtTATGGGTTCGATTCCTAT..CGGGCGCACCA tRNA-Arg-TCG-1-1 Sc: 76.8 >>>>.>>..>>>>...........<<<<.>>>>>........<<<<<...................>>>>>.......<<<<<..<<.<<<<.... GTCCTCGTAGCTCAGCAGGAt.A.GAGCGCAAAATTCCTAA.TTTTGAG..............GcCGTGAGTTCGAATCTCGC..CGTGGACACCA tRNA-Arg-CCT-1-1 Sc: 63.4 >>>>>>>..>>>>...........<<<<.>>>>>........<<<<<...................>>>>>.......<<<<<..<<<<<<<.... GCGTTCATAGCTCAGCTGGAt.A.GAGCAACGGCCTTCTAA.GCCGTAG..............GtCAGAGGTTCGAATCCTCT..TGGGCGTACCA tRNA-Arg-TCT-1-1 Sc: 77.0 >>>>>>>..>>>>...........<<<<.>>>>..........<<<<...................>>>>>.......<<<<<..<<<<<<<.... GACCCTTTCGTCTAGT.GGCccA.GGACAACACTCTCTC...TGTGTG.GAAA............CAGAGGTTCAAATCCTCT..AGGGGTCGCCA tRNA-Arg-TCT-2-1 Sc: 44.6
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCGGATTAGCTCAGCGGTA.GAGTAGTCGGCTGTTAACCGATTG...........GtCGTAGGTTCGAATCCTACATCCGGAGCCA tRNA-Asn-GTT-1-1 Sc: 81.1
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCAGCGGTAGTTCAGCTGGTtAGAATGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCGAGCCCCGTCCGCTGCGCCA tRNA-Asp-GTC-1-1 Sc: 87.1 GCAGCGGTAGTTCAGCTGGTtAGAATGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCGAGCCCCGTCCGCTGCGCCA tRNA-Asp-GTC-1-2 Sc: 87.1
Cys tRNAs
>>>>>>>..>>>..........<<<..>>>>.......<<<<................>>>>>.......<<<<<.<<<<<<<.... GGCGACATAGCCAAGCGGTA.AGGCATGGGCCTGCAAAGCCTTG...........AtCTCCGGTTCGAATCCGGA.TGTCGCCTCCA tRNA-Cys-GCA-1-1 Sc: 71.4
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATCGCCAAGCGGTA.AGGCAACAGGTTTTGGTCCTGTCA...........TtCAGGGGTTCGAATCCCTTTACCCCATCCA tRNA-Gln-TTG-1-1 Sc: 64.5
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCATTCGTCTAGCGGTtA.GGACATCGCCCTTTCACGGCGGTA...........ACACGAGTTCGAGTCTCGTATGGGTCACCA tRNA-Glu-TTC-1-1 Sc: 68.0
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGG.GGT.A.GAGCACAACCTTGCCAAGGTTGGG...........GtCGCGAGTTCGAATCTCGTTTCCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 84.7 GCGGGAATAGCTCAGG.GGT.A.GAGCACAACCTTGCCAAGGTTGGG...........GtCGCGAGTTCGAATCTCGTTTCCCGCTCCA tRNA-Gly-GCC-1-2 Sc: 84.7 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAGTAGCTCAGTTGGCtA.GAGCATCAGCCTTCCAAGCTGAGG...........GtCGCGGGTTCGAGTCCCGTTTCCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 92.0
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GTGAGTGTAGCTCAGTCGGTtAGAGCATCAGATTGTGGTCCTGAGG...........GtCGTGGGTTCAATTCCCATCACTCACCCCA tRNA-His-GTG-1-1 Sc: 68.3
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAGCTGGTtAGAGTGCACCCCTGATAAGGGTGAG...........GtCACAAGTTCAAGTCTTGTTAGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 82.1 GGGCCTATAGCTCAGCTGGTtAGAGTGCACCCCTGATAAGGGTGAG...........GtCACAAGTTCAAGTCTTGTTAGGCCCACCA tRNA-Ile-GAT-1-2 Sc: 82.1 GGGCCTATAGCTCAGCTGGTtAGAGTGCACCCCTGATAAGGGTGAG...........GtCACAAGTTCAAGTCTTGTTAGGCCCACCA tRNA-Ile-GAT-1-3 Sc: 82.1
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGTTATGGTGGAATTGGTaGACACGCCATCTTGAGGGGGTGGTGCGC.TCC....GCGTGTGCGAGTTCAAATCTCGC.TAACCGCACCA tRNA-Leu-GAG-1-1 Sc: 60.3 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>..........<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGATGTGGTGAAATTGGCaGACACGCCAGACTTAGGATCTGGTGCA..GCAA....TGCGTGAAGGTTCAAGTCCTTT.CATCCGCACCA tRNA-Leu-TAG-1-1 Sc: 76.2 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCCGAGTGGTGAAACTGGTaGACGCGCCAGACTCAAAATCTGGTAAGG.GCAA...CCTTGTGTCGGTTCGAGTCCGAC.CTCGGGCACCA tRNA-Leu-CAA-1-1 Sc: 78.7 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCCGGGTGGTGGAATTGGTaGACACAAGGGACTTAAAATCCCTCGGAATTTTT..CTTCCGTGCCGGTTCAAGTCCGGC.CTCGGGCACCA tRNA-Leu-TAA-1-1 Sc: 67.6
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCTCGTTAGCTCAGCCGGTAGAGCATCTCCCTTTTAAGGAGGGG...........GcCGTTGGTTCGAATCCAACACGGGACACCA tRNA-Lys-TTT-1-1 Sc: 78.3 GTCTCGTTAGCTCAGCCGGTAGAGCATCTCCCTTTTAAGGAGGGG...........GcCGTTGGTTCGAATCCAACACGGGACACCA tRNA-Lys-TTT-1-2 Sc: 78.3
Met/Ile2 tRNAs
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGAAGTAGAGCAGT.GGTtA.GCTCGTCGGGCTCATAACCCGAAG...........GtCGGGAGTTCAAATCTCCCCTTCGCAACCA tRNA-fMet-CAT-1-1 Sc: 82.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCAGGGTAGCTCAGCTGGTtA.GAGCGCTGGTCTCATAAGCCGGAG...........GtCGGGAGTTCAAGTCTCCCCCTTGACACCA tRNA-Met-CAT-1-1 Sc: 74.4 GGATTTATAGCTCAGTTGGTtA.GAGCAACCGGCTCATAACCGGTTG...........GtCGCAGGTTCGAGTCCTGCTAAATCCACCA tRNA-Ile2-CAT-1-1 Sc: 89.6
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTTGGATAGCTCAGTCGGTAGAGCAGCAGACTGAAAATCTGCGT...........GtCGGCAGTTCGATTCTGCCTCTAACCACCA tRNA-Phe-GAA-1-1 Sc: 76.0
Pro tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTAGCGCAGTCtGGTtAGCGCACTTGGTTTGGGACCAAGGG...........GcCGAAGGTTCGAATCCTTTCACCCCGACCA tRNA-Pro-TGG-1-1 Sc: 82.3
SeC tRNAs
>>>>>>>..>>>...........<<<..>>>>.......<<<<...>.>>.>........<.<<.<...>>>>>.......<<<<<<<<<<<.<.... GGAAGATTAGCGTATCTGGTgATCGCCACTGACTTCAAATCAGATGAAAGGATaGTTGaCTATTCTTtGGGGAGTTCGATTCTCTCATCTTCtCGCCA tRNA-SeC-TCA-1-1 Sc: 67.5
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>........<<<<..>>>>>.......<<<<<<<<<<<<.... AGACAGGTGTCCGAGCGGTtgA.AGGAGCACGCCTGGAACGCGTGTAAAGT.GCAA...GCTTTCGAGGGTTCGAATCCCTTCCTGTCTGCCA tRNA-Ser-GGA-1-1 Sc: 73.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>..........<<<..>>>>>.......<<<<<<<<<<<<.... CGGGAGATGGCTGAGTGGTcgA.AAGCGGCGGTCTTGAAAACCGTTGAGGG.TCAC...ACCTCCAGGGGTTCGAATCCCTTTCTCCCGGCCA tRNA-Ser-TGA-1-1 Sc: 78.5 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>......<<<<<..>>>>>.......<<<<<<<<<<<<.... GGACAGATGGGTGAGTGGCtgA.AACCACACCCCTGCTAAGGGTGCAGATCTTAAC..GGGTCTCGAGGGTTCAAATCCCTCTCTGTCCGCCA tRNA-Ser-GCT-1-1 Sc: 75.0
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTCGTATGGCTCAGA.GGTA.GAGCACTCCCTTGGTAAGGGAGAG...........GtCGCGGGTTCAATTCCCGCTATGAGCTCCA tRNA-Thr-GGT-1-1 Sc: 77.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGGTTTAGCTCAGTTGGTA.GAGCAGCTGCCTTGTAAGCAGCAG...........GtCGGGGGTTCAAGTCCCTTAACCAGCTCCA tRNA-Thr-TGT-1-1 Sc: 86.3
Trp tRNAs
>>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... AGGGCAATAGCTCCAACGGTAGAGCGCCGGATTCCAAATCCGATG...........GtTGGGGGTTCGAATCCCTCTTGCCCTGCCA tRNA-Trp-CCA-1-1 Sc: 78.0
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGTGAGTTACTCAAGTGGCcaA.CGAGGGCAGACTGTAAATCTGCTGGCTTTC....GCCTtCCGTGGTTCGAATCCACG.ACTCACCACCA tRNA-Tyr-GTA-1-1 Sc: 63.6
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTTCCGTAGCTCAGCTGGTAGAGCACTACCTTGACATGGTAGTG...........GcCGTTGGTTCAAGTCCAATCGGAGCCACCA tRNA-Val-GAC-1-1 Sc: 77.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCGCTTAGCTCAGTTGGTAGAGCGCCACCCTTACAAGGTGGAT...........GtCATAAGTTCGAGTCTTATAGTGACCACCA tRNA-Val-TAC-1-1 Sc: 80.4 GGTCGCTTAGCTCAGTTGGTAGAGCGCCACCCTTACAAGGTGGAT...........GtCATAAGTTCGAGTCTTATAGTGACCACCA tRNA-Val-TAC-1-2 Sc: 80.4