Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGATGGTAGAGCGCTTGCATGGCATGCAAGAG...........GtCAGCGGTTCGATCCCGCTTAGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 75.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCGTAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGAT...........GtCAGCGGTTCGATTCCGCTCGGCTCCACCA tRNA-Ala-TGC-1-1 Sc: 88.5 GGGGCCGTAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGAT...........GtCAGCGGTTCGATTCCGCTCGGCTCCACCA tRNA-Ala-TGC-1-2 Sc: 88.5 GGGGCCGTAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGAT...........GtCAGCGGTTCGATTCCGCTCGGCTCCACCA tRNA-Ala-TGC-1-3 Sc: 88.5
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCAGCTGGAtAGAGTACCAGACTACGAATCTGGGG...........GtCAGGAGTTCGAATCTCTTCGGGCGCACCA tRNA-Arg-ACG-1-1 Sc: 84.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCATCCGTAGCTCAGCTGGAtAGAGTATTGGATTCCGATTCCAAGG...........GtCACAGGTTCGAATCCTGTCGGGTGCACCA tRNA-Arg-CCG-1-1 Sc: 78.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCCGTAGCTCAGCAGGAtAGAGCACCAGATTCCTAATCTGGTT...........GtCGCGCGTTCGAATCGCGCCGGGATCACCA tRNA-Arg-CCT-1-1 Sc: 75.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCCTTAGCTCAGCTGGAtAGAGCGTCTGCCTTCTAAGCAGGAT...........GtCGCAGGTTCGAATCCTGCAGGGGTCACCA tRNA-Arg-TCT-1-1 Sc: 84.2
Asn tRNAs
>>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... TCCCTGGTAGCTCAGCGGTA.GAGCATTCGACTGTTAATCGACAG...........GtCGCCGGTTCGAATCCGGCCCGGGGAGCCA tRNA-Asn-GTT-1-1 Sc: 78.3
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGCTCAGTTGGTtAGAGCGCCGGCCTGTCACGCCGGAG...........GtCACGGGTTCGAGTCCCGTCACTCGCGCCA tRNA-Asp-GTC-1-1 Sc: 91.0
Cys tRNAs
>>>>>>>..>>............<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCTCGTGGCAGACTGGTT.ACGCAGAGGACTGCAAATCCTTCT...........AACCCGGTTCGATTCCGGGCGAGGCCTCCA tRNA-Cys-GCA-1-1 Sc: 53.1
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TGGGGAATAGTTCAATGGCA.GAACGACGGTCTCTGACACCGTTA...........A.TCTTGGTTCGAATCCAAG.TTCCCCAGCCA tRNA-Gln-CTG-1-1 Sc: 71.8 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TGGGGCGTAGCCAAGCGGCA.AGGCAGTGGTTTTTGGTACCGCG............AtCCCTGGTTCGAATCCAGG.CGCCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 65.2
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGCCCTTCGTCTATCGGTtA.GGACGTCAGATTTTCATTCTGGAA...........AGAGGGGTTCGATTCCCCTAGGGCGTACCA tRNA-Glu-TTC-1-1 Sc: 57.8
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGCTCAGGGGTA.GAGCACAACCTTGCCAAGGTTGGG...........GtCGAGGGTTCGAATCCCTTCGCCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 86.6 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCGGGTATAGCTCAATGGTA.GAGCAGCAGCCTTCCAAGCTGAAT...........A.TGCGGGTTCGATTCCCGCTATCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 78.0
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGTTGTAGCTCAGTTGGTtAGAGCGCAGGTTTGTGGCACCTGAG...........GtCGGTGGTTCGAATCCACCCAATCGTACCA tRNA-His-GTG-1-1 Sc: 76.5
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGCTCAGGCGGTtA.GAGTGCACCCCTGATAAGGGTGAG...........GtCGGTAGTTCGAGTCTACCTGGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 78.2 GGGCCCATAGCTCAGGCGGTtA.GAGTGCACCCCTGATAAGGGTGAG...........GtCGGTAGTTCGAGTCTACCTGGGCCCACCA tRNA-Ile-GAT-1-2 Sc: 78.2 GGGCCCATAGCTCAGGCGGTtA.GAGTGCACCCCTGATAAGGGTGAG...........GtCGGTAGTTCGAGTCTACCTGGGCCCACCA tRNA-Ile-GAT-1-3 Sc: 78.2
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGTCGTGGCGGAAT.GGTaT.ACGCGCAGCGTTGAGGTCGCTGTAGG...GCAA.......CCTGTGGAAGTTCGAGTCTTCT.CGACCGCACCA tRNA-Leu-GAG-1-1 Sc: 66.6 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<.... GCCCAGATGGCGGAAT.GGTaT.ACGCGCAGGTTTCAGGTATCTGTGCC...GCAA.......GGCGTGGAGGTTCGAATCCTCT.TCTGGGCACCA tRNA-Leu-CAG-1-1 Sc: 66.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<.... GCCCGGTTGGTGGAAATGGTaG.ACACACTTGGTTTAGGTCCAAGCGC....GAAA........GCATGGGGGTTCGAGTCCCTC.ATCGGGCACCA tRNA-Leu-TAG-1-1 Sc: 58.1 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>.>........<.<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGATGTGGCGGAACTGGTaG.ACGCGACGGATTCAAAATCCGTTTTTGGT........GACAAAGTGTCGGTTCGATTCCGAC.CATCCGTACCA tRNA-Leu-CAA-1-1 Sc: 73.3
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTGATTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGG...........GtCGCGGGTTCGATCCCTGCATCACCCACCA tRNA-Lys-CTT-1-1 Sc: 88.4 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GAGCGCGTAGCTCAGATGGTAGAGCAACTGACTTTTAATCAGTGG...........GtCCTGGGTTCGATCCCCAGCGCGCTCACCA tRNA-Lys-TTT-1-1 Sc: 83.4
Met/Ile2 tRNAs
.>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTAtGGT.A.GCTCGTCAGGCTCATAACCTGAAG...........GtCGTGGGTTCAAATCCTACCCCCGCAACCA tRNA-fMet-CAT-1-1 Sc: 76.7 CGCGGGGTGGAGCAGTAtGGT.A.GCTCGTCAGGCTCATAACCTGAAG...........GtCGTGGGTTCAAATCCTACCCCCGCAACCA tRNA-fMet-CAT-1-2 Sc: 76.7 CGCGGGGTGGAGCAGTAtGGT.A.GCTCGTCAGGCTCATAACCTGAAG...........GtCGTGGGTTCAAATCCTACCCCCGCAACCA tRNA-fMet-CAT-1-3 Sc: 76.7 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGGGTAGCTCAGTT.GGTtA.GAGCAGAGGAATCATAATCCTTGT...........GtCGGGGGTTCGAATCCCTCCTTCGCTACCA tRNA-Met-CAT-1-1 Sc: 72.4 >>>>>>>..>>>>...........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAAT..GGTtA.GAGCCCACGGCTCATAACCGTTAG...........GtTGGGGGTTCGAGTCCCTCCGGGCCCACCA tRNA-Ile2-CAT-1-1 Sc: 77.7
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.... GCCCAGATAGCTCAGTTGGTAGAGCAACGGACTGAAAATCCGTGT...........GtCGCTGGTTCGATTCCTGCTCTGGGCACCA tRNA-Phe-GAA-1-1 Sc: 84.4
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGAGTGTAGCGCAGCCtGGTAGCGCATCTGGTTTGGGACCAGAGG...........GtCGGGAGTTCGAATCTCTCCACTCCGACCA tRNA-Pro-TGG-1-1 Sc: 78.4
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>.........<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGATAGGTGGCCGAGTGGTtgA.AGGCGCACGCCTGGAACGCGTGT.ATATGTAAAA.....GCATAT.CGAGGGTTCGAATCCCTC..TCTGTCCGCCA tRNA-Ser-GGA-1-1 Sc: 76.8 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.>.........<.<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGACAGAGTGGTtgA.ATGTACCGCACTCGAAATGCGGAGTACCTA.........TTGGTATCGGGGGTTCGAATCCCCC..TCTCTCCTCCA tRNA-Ser-CGA-1-1 Sc: 77.6 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAAGGATGGCCGAGCGGTttA.AGGCACTGGTCTTGAAAACCAGAGATGG..GAAA.......CTGTCCGTGGGTTCGAATCCCAC..TCCTTCCGCCA tRNA-Ser-TGA-1-1 Sc: 84.0 GGAAGGATGGCCGAGAGGTttA.AGGCACTGGTCTTGAAAACCAGGGATGG..GAAA.......CTGTCCGTGGGTTCGAATCCCAC..TCCTTCCGCCA tRNA-Ser-TGA-2-1 Sc: 81.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>...........<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCCGAGTGGTtgA.AGGCGCGCCCCTGCTAAGGGTGT.ATATG.GAAAt.....CATAT.CGAGGGTTCGAATCCCTT..CCTCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 79.8
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGCAGTAGCTCAGT.GGTA.GAGCACTCCCTTGGTAAGGGAGAG...........GtCGAGAGTCCGATTCTCTTCTGCAGCACCA tRNA-Thr-GGT-1-1 Sc: 79.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCACTTTAGCTCAGTTGGTA.GAGCACATCATTCGTAATGATGGG...........GtCACGTGTTCGATTCACGTAAGTGGCACCA tRNA-Thr-CGT-1-1 Sc: 82.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCTTGTAGCTCAGCTGGTA.GAGCGCCTGATTTGTAATCAGGAG...........GtAGCGGGTTCGAGTCCTGCCGGGGGCACCA tRNA-Thr-TGT-1-1 Sc: 83.5
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAG...........GcCGTGGGTTCGAGTCCCTCTGCCCCTGCCA tRNA-Trp-CCA-1-1 Sc: 84.9
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>..>.......<..<...>>>>>.......<<<<<<<<<<<<.... GGAGGGATGCCCGAGTGGTtaA.AGGGGGCGGACTGTAAATCCGTTGGTTT.......ATCCTaCGTTGGTTCGAATCCAACTCTCTCCACCA tRNA-Tyr-GTA-1-1 Sc: 75.1
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCATGTAGTTCAGTGGTA.GAACACTACGTTGACATCGTAGGG...........GtCGCAAGTTCAATTCTTGCCATGCCTACCA tRNA-Val-GAC-1-1 Sc: 78.3 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGATTAGCTCAGTGGTA.GAGCGCCTCGTTTACACCGAGGAT...........GtCGGGAGTTCGAATCTCTCATTGCCCACCA tRNA-Val-TAC-1-1 Sc: 80.8