Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCATTGGCACAGTTGGCtAGCGCGCTTCCATGGCATGGAAGAG...........GtCATCGGTTCGAATCCGATATGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 69.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGACATAGCTCAGTTGGCtAGAGCACCTGCTTTGCAAGCAGGGG...........GtCCAGGGTTCGAGTCCCTGTGTCTCCACCA tRNA-Ala-TGC-1-1 Sc: 88.4
Arg tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACCCGTAGCTCAGCTGGAt.A.GAGCGTTGGCTTGCGGAGCCAAAG...........GtCATAGGTTCGAATCCTGTCGGGTGTACCA tRNA-Arg-GCG-1-1 Sc: 80.5 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACCCGTAGCTCAGT.GGAttA.GAGCACTGGTCTTCGGAACCAGGT...........GtCGTAGGTTCGAATCCTACCGGGTGTACCA tRNA-Arg-TCG-1-1 Sc: 80.8 >>>>>>>..>>>>...........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCCTGGTAGCTCAACTGGAc.A.GAGCAGTTCCGTCCTAAGGAAAAG...........GtTGCAGGTTCGACTCCTGCCCGGGGTACCA tRNA-Arg-CCT-1-1 Sc: 67.0 >>>>>>>..>>>>...........<<<<..>>>.........<<<.................>>>>>.......<<<<<<<<<<<<.... GCCCCGGTAGCTCAGTTGGAt.A.GAGCAGAGGACTTCTAAGCCTAAG...........GtCGCTGGTTCAAGCCCAGCCCGGGGTACCA tRNA-Arg-TCT-1-1 Sc: 67.6
Asn tRNAs
Asp tRNAs
.>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<...<<<..... CTCGTAGTGAAGTTGGCctATCACGCCTCCCTGTCACGGAGGAG...........AtCGCCGGTTCGAATCCCGCCA.CGAAA... tRNA-Asp-GTC-1-1 Sc: 38.4
Cys tRNAs
>>>>>>>..>>.............<<.>>>>>..............<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCCGAAGAGGAA.GAGCACCACC..CACAC..tactaGGTGGAG...........GtCGTAGGTTCGAACCCTATCAGTCCCA... tRNA-Cys-ACA-1-1 Sc: 39.1 >>>>>>>..>>>...........<<<.>>>>>..............<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGCCGTGGCCGAAT.GGTT.AGGCAGAGCTCTGCAAA.......AGCTCGT...........A.CAGCGGTTCGATTCCGCTCGGTGCCTCCA tRNA-Cys-GCA-1-1 Sc: 65.4
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCTTATCGTCTAACGGTtA.GGACATCAGGTTCTCATCCTGGCA...........ATCCGGGTTCGATTCCCGGTAAGGTCACCA tRNA-Glu-CTC-1-1 Sc: 58.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTCCCATCGTCTAACGGTtA.GGACACCAGGTTTTCATCCTGGCA...........ATCCGGGTTCGATTCCCGGTGGGATCACCA tRNA-Glu-TTC-1-1 Sc: 63.8
Gln tRNAs
>>>>>>>..>>>..........<<<..>>>>.......<<<<.................>>>>>.......<<<<<.<<<<<<<.... TGGGGATTAGCCAAGCGGTA.AGGCATCGGGTTCTGGTCCCGTG............AtCGGGGGTTCGAATCCCTC.ATCCCCAGCCA tRNA-Gln-CTG-1-1 Sc: 70.1 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TGGGCCGTGGCCAAGTGGTA.AGGCACCAGGTTTTGGTCCTGGCA...........TtCGCAGGTTCGAATCCTGC.CGGCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 78.0
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTTTAGCTCAGTTGTT.A.GAGCGCTTCCTTGCCATGGAAGAG...........GcCAGGAGTTAGAGTCTCCTAACCCGCACCA tRNA-Gly-GCC-1-1 Sc: 71.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGAGATTAGTATAGT.GGC.A.GTACGCTTGCTTCCCAAGCAAGAG...........G.CGCCAGTTCGATTCTGGTATCTCGCACCA tRNA-Gly-CCC-1-1 Sc: 78.8 >>>>>>>..>>>>..........<<<<.>.>>>.......<<<.<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTCGTATAAT.GGCtA.ATATATCTGCCTTCCAAGCAAATG...........A.TGCGAGTTCGATTCTCGCCACCCGCACCA tRNA-Gly-TCC-1-1 Sc: 63.6
His tRNAs
>>>.>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<.<<<.... GCGAGAGTAGTTCAATGGTtA.GAACGTCGGGTTGTGGCTCCGAAG...........ACGAGGGTTCAATTCCCTTCTCCCGCCCCA tRNA-His-GTG-1-1 Sc: 66.2
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GGGGCTATAGCTCAGTTGGTtA.GAGCGCGTCACTGATAATGACGAG...........GtCGATGGTTCGAGTCCACCTAGCCCCACCA tRNA-Ile-GAT-1-1 Sc: 82.0
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>.>>.......<<.<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCTCATCGGTtA.GAGCAGGCGGCTCATAACCACTTG...........GtAGTAGGTTCGATTCCTACCAGCCCCACCA tRNA-Ile2-CAT-1-1 Sc: 66.7
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.>.........<.<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGCGAGTGGCGGAATT.GGTaGACGCGTCAGCTTGAGGGGCTGGT.GAGCATT........GCGCTCGTGGAGGTTCAAGTCCTCT.CTCGCGCACCA tRNA-Leu-GAG-1-1 Sc: 63.5 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCACGAGTGGCGGAATT.GGTaGACGCGCTAGCTTCAGGTGCTAGT.GCCC...TTCG......GGGCGTGGAGGTTCAAGTCCTCT.CTCGTGTACCA tRNA-Leu-CAG-1-1 Sc: 69.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGATGTGGTGGAATT.GGTaGACACGCTAGCCTTAGGAGCTAGT.GCTTT...........CGGGCGTGAAGGTTCAAGTCCTTT.CATCCGCACCA tRNA-Leu-TAG-1-1 Sc: 73.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGCGATGGCGGAATT.GGTaGACGCGCGGGACTCAAAATCCCGT.TCCA...GCAA......TGGAGTGTGAGTTCGATTCTCAC.TCGCGGCACCA tRNA-Leu-CAA-1-1 Sc: 78.9 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>.>>.............<<.<..>>>>>.......<<<<<.<<<<<<<.... GCGCGGGTGCTGGAACTaGGTaGACAGTGCAGACTTAAAATCTGTTGGCCC...AAAA......GGCCGTGCGGGTTCGATCCCCGC.CCCGCGCACCA tRNA-Leu-TAA-1-1 Sc: 69.8
Lys tRNAs
>>>>>....>>>>.........<<<<.>>>>>.......<<<<<..................>>>.......<<<....<<<<<.... GGGTCCATAGCTCAGCTGGTtAGAGCACCTGCCTCTTAAGCAGGGT...........GtCCTGGGTTCAAGCCCCTCCTGGCCCTCCA tRNA-Lys-CTT-1-1 Sc: 53.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCCATAGCTCAGCTGGTtAGAGCACCTGCCTTTTAAGCAGGGT...........GtCGTGGGTTCAAGCCCCACTGGACCCTCCA tRNA-Lys-TTT-1-1 Sc: 85.0
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GGCAGCGTAGCTCAGTTGGTtAGAGCGTAGGACTCATAAGCCTAAG...........GtCACTGGTTCAATTCCAGTCGCTGCTACCA tRNA-Met-CAT-1-1 Sc: 74.9
fMet tRNAs
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTCtGGTcAGCTCGCGTGGCTCATAACCACGAG...........GtCGCAGGTTCAAATCCTGCCCCCGCAACCA tRNA-fMet-CAT-1-1 Sc: 80.5
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTCTTTAGCTCAGTTGGTAGAGCAGAGGCCTGAAGAGCCTTGT...........GtCACTGGTTCAAGTCCAGTAGGAGCCACCA tRNA-Phe-GAA-1-1 Sc: 78.9
Pro tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTTTGGCGCAGTCtGGT.AGCGCGCACGCCTGGGGGGCGTGAG...........GtCATCGGTTCAAGTCCGGTAACCCCGACCA tRNA-Pro-GGG-1-1 Sc: 68.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGTCaGGCaAGCGCGCACCGTTCGGGACGGTGAG...........GtCGCTGGTTCAAATCCAGTCACCCCGACCA tRNA-Pro-CGG-1-1 Sc: 74.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGTT.GGT.AGCGCGCGCGGTTTGGGACCGTGAG...........GtCGAAGGTTCAAGTCCTTTCACCCCGACCA tRNA-Pro-TGG-1-1 Sc: 78.2
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCCGAGTGGTtgA.AGGCGCACGCTTGGAAAGCGTGT.ATACGT.GCAA.ACGTAT.CGCAGGTTCGAATCCTGT..TCTCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 88.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>..........<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGCAGGAGTGGTtgA.ACTGGCCGCTCTCGAAAAGCGGTGTGCC...GCAA...GGCACCGAGGGTTCGAATCCCTC..CCTCTCCGCCA tRNA-Ser-CGA-1-1 Sc: 85.5 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>........<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGACCGAGTGGTtgA.AGGTACCGGTCTTGAAAACCGGC.GTGGGG.TAAA.ACTCAC.CGAGGGTTCGAATCCCTC..CCTCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 87.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>>>>>....<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGAGTACCCAAGTGGCtgA.AGGGGACGGTTTGCTAAATCGTTAGTGTGGGGAGACCTGCAG.CGGGAGTTCGAATCTCCC..CTCCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 80.8
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGTCGTAGCTCAGTTGGT.AGAGCGCATCCATGGTAAGGATGAG...........GtCTCGGGTTCAACCCCCGACGATGGCTCCA tRNA-Thr-GGT-1-1 Sc: 71.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCTTAGCTCAGTTGGT.AGAGCGGTACTTTCGTAAAGTATAG...........GtCGCCGGTTCAAATCCGGCAGGCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 87.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCTTTAGCTCAGTTGGTtAGAGCAACTGTTTTGTAAACAGTAG...........GtCCTCGGTTCGAGTCCGAGAAGCGGCTCCA tRNA-Thr-TGT-1-1 Sc: 86.3
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGCATAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGT...........GtCGTAGGTTCAAGTCCTGCTGCCCCTGCCA tRNA-Trp-CCA-1-1 Sc: 84.8
Tyr tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGAGTCGTCTAGTGGCaA.TGACAGGAGACTGTAAATCTCCCGCTTTTA....AGCTtCGTAGGTTCGAGTCCTAC.CTCCGGTACCA tRNA-Tyr-GTA-1-1 Sc: 67.0
Val tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGGTTAGCTCAGTTGGCtAGAGCGCCTCATTGACGTTGAGGAG...........GtCAGGGGTTCAACTCCCTTATCGCCCACCA tRNA-Val-GAC-1-1 Sc: 75.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTTGTTAGCTCAGTTGGCtAGAGCATCTCGTTTACACCGAGAGG...........GcCGGGGGTTCGAGTCCCTCACAACCCACCA tRNA-Val-TAC-1-1 Sc: 83.7
SeC tRNAs
Sup tRNAs