tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 37
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 0
Total tRNAs 37
Intron Summary (tRNAs with introns: 0)

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 919
Number of Codons: 316235

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
 
GGC
1
CGC
 
TGC
1
2
GCT
3.57
GCC
1.01
GCG
0.95
GCA
1.94
7.47%
GlyACC
 
GCC
1
CCC
 
TCC
1
2
GGT
1.22
GGC
0.86
GGG
1.48
GGA
2.74
6.3%
ProAGG
 
GGG
1
CGG
 
TGG
1
2
CCT
2.4
CCC
0.58
CCG
0.41
CCA
0.97
4.36%
ThrAGT
 
GGT
1
CGT
1
TGT
1
3
ACT
1.71
ACC
0.91
ACG
0.82
ACA
1.68
5.12%
ValAAC
 
GAC
1
CAC
 
TAC
1
2
GTT
2.4
GTC
1.03
GTG
1.29
GTA
1.69
6.41%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
 
GGA
1
CGA
1
TGA
1
ACT
 
GCT
1
 
 
 
 
4
TCT
3.3
TCC
1.22
TCG
0.68
TCA
0.96
AGT
1.04
AGC
0.85
 
 
 
 
8.05%
ArgACG
1
GCG
 
CCG
 
TCG
1
 
 
 
 
CCT
 
TCT
1
3
CGT
1.3
CGC
0.77
CGG
0.43
CGA
0.95
 
 
 
 
AGG
0.26
AGA
1.14
4.85%
LeuAAG
 
GAG
1
CAG
1
TAG
1
 
 
 
 
CAA
1
TAA
1
5
CTT
2.28
CTC
1.22
CTG
0.99
CTA
1.49
 
 
 
 
TTG
1.99
TTA
3.24
11.21%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
1
 
 
 
 
1
TTT
3.06
TTC
1.77
 
 
 
 
4.83%
AsnATT
 
GTT
1
 
 
 
 
1
AAT
2.42
AAC
1.08
 
 
 
 
3.5%
Lys 
 
 
 
CTT
 
TTT
1
1
 
 
 
 
AAG
1.75
AAA
4
5.75%
AspATC
 
GTC
1
 
 
 
 
1
GAT
3.45
GAC
1.05
 
 
 
 
4.5%
Glu 
 
 
 
CTC
 
TTC
1
1
 
 
 
 
GAG
2.36
GAA
4.21
6.57%
HisATG
 
GTG
1
 
 
 
 
1
CAT
1.62
CAC
0.67
 
 
 
 
2.29%
Gln 
 
 
 
CTG
 
TTG
1
1
 
 
 
 
CAG
1.46
CAA
2.71
4.17%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
 
GAT
1
CAT
1
TAT
 
2
ATT
3.48
ATC
1.98
 
 
ATA
1.14
6.6%
fMet/Met 
 
 
 
CAT
1/1
 
 
2
 
 
 
 
ATG
2
 
 
2%
TyrATA
 
GTA
1
 
 
 
 
1
TAT
2
TAC
1
 
 
 
 
3%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0.05
TAG
0.09
TAA
0.16
0.3%
CysACA
 
GCA
1
 
 
 
 
1
TGT
1
TGC
0.61
 
 
 
 
1.61%
Trp 
 
 
 
CCA
1
 
 
1
 
 
 
 
TGG
0.96
 
 
0.96%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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