Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTGTGGCGCAGTTGGT.A.GCGCACCTGCATGGCATGCAGGGG...........GtCAGGGGTTCGAATCCCCTCAGATCCA... tRNA-Ala-GGC-1-1 Sc: 76.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATGGCGCAGTTGGT.A.GCGCGCCTCGTTCGCATCGAGGAG...........GtCAGGAGTTCGAATCTCCTTAGGTCCA... tRNA-Ala-CGC-1-1 Sc: 74.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGTCATAGCTCAATTGGT.A.GAGCGCCTGCTTTGCAAGCAGGAG...........GtCCGGGGTTCGATTCCCCGTGACTCCA... tRNA-Ala-TGC-1-1 Sc: 81.3 >.>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<.<.... GCCTCTGTAGCTCAAA.GGAtA.GAGCAGCCCTTTTGCGAAGGGAAG...........GtAGCGGGTTCGAATCCCGTCAGGGATT... tRNA-Ala-TGC-2-1 Sc: 43.3
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCAACGGAtA.GAGCATCTGACTACGGATCAGAAG...........GtTGGGGGTTCGAATCCCTCCGGGCGCA... tRNA-Arg-ACG-1-1 Sc: 78.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCATAGCTCAGGGGAtA.GAGCACTGCCCTCCGGAGGCAGGG...........G.CGGAGGTTCGAATCCTCCTGGGGGCA... tRNA-Arg-CCG-1-1 Sc: 74.9 >>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCTCTGTAGCTCAATGGA.A.GAGCAGTTCCGTCCTAAGGAAAGG...........GtTGGGGGTTCGAGTCCCTCCAGGGGCACCA tRNA-Arg-CCT-1-1 Sc: 69.1 >>>>>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... CCCCCTGTAGCTCAATGGAtA.GAGCATCGGCCTTCTAATCCGACG...........GtTGCGCGTTCGAGTCGCGCCGGGGGGA... tRNA-Arg-TCT-1-1 Sc: 62.6
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCTCGATAGCTCAATTGGCAGAGCAGCCGGCTGTTAACCGGCAG...........GtTGTTGGTTCGAGTCCAACTCGGGGAG... tRNA-Asn-GTT-1-1 Sc: 69.3
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCTGTAGCGCAGCTGGTtAGCGTGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCAAGTCCCGTCAGGGTCGCCA tRNA-Asp-GTC-1-1 Sc: 84.1
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTGGGGTGGCCGAGAGGCG.AGGCAGCGGCCTGCAAAGCCGTCC...........ACGCGGGTTCAAATCCCGTCCCCACCT... tRNA-Cys-GCA-1-1 Sc: 67.2
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TGGGGTATGGTGTAATTGGCA.ACACGGAAGATTCTGATTCTTTT............GtTCTTGGTTCGAGTCCAGG.TACCCCAG... tRNA-Gln-CTG-1-1 Sc: 53.0 >>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<.<<<<<<<.... TCCGCCTTGGTGTAAC.GGCA.GCACTTCAGCCTTTGGAGCTGTGA...........GgTCCAGGTTCGAATCCTGG.GGGCGGAGCCA tRNA-Gln-TTG-1-1 Sc: 58.0
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCCATCGTTTAGCGGCctA.GGACACCGCCCTCTCACGGCGGTA...........ACACCGGTTCGAATCCGGTTGGGGTCACCA tRNA-Glu-CTC-1-1 Sc: 69.7 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCCATCGTTTAGTGGCctA.GGACGGCGCCCTTTCACGGCGTTA...........ACACGGGTTCGAATCCCGTTGGGGTCACCA tRNA-Glu-TTC-1-1 Sc: 70.2
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGATGTGGCGCAGTGGTA.GCGCATCACCTTGCCAAGGTGAGG...........GtCGCGAGTTCGAATCTCGTCATCCGCT... tRNA-Gly-GCC-1-1 Sc: 80.9 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGAGTGTAGTTCAATGGTA.GAACTTCAGCTTCCCAAGCTGATA...........G.CGCGGGTTCGATTCCCGTCACTCGCTCCA tRNA-Gly-CCC-1-1 Sc: 81.7 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATGTAGCTCAATGGTA.GAGCCTCAGTCTTCCAAACTGATC...........A.CGCGGGTTCGATTCCCGTCATCCCCTCCA tRNA-Gly-TCC-1-1 Sc: 82.1
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGGCGTAGCTCAGTTGGCAGAGCGCTGGCTTGTGGAGCCGGAA...........GtCGCGGGTTCGAGCCCCGTCGTCCACCCCA tRNA-His-GTG-1-1 Sc: 75.5
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATATAGCTCAGTTGGTtAGAGCGCTTCACTGATAATGAAGAG...........GtCCCAGGTTCAAATCCTGGTATCCCCACCA tRNA-Ile-GAT-1-1 Sc: 90.4
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>...........<<<<<....>>>>................<<<<..>>>>>.......<<<<<.<<<<<<<.... GTCCGGATGGCGGAATTGGTaG..ACGCGCTAGCTTGAGGT....GCTAGT...GCCC....GTATta......GGGCGTGGGGGTTCAAGTCCCCC.TTCGGACA... tRNA-Leu-GAG-1-1 Sc: 57.5 >>>>>>>..>>>.............<<<.>>>>>...........<<<<<....>>>>.>............<.<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGCGAGTGGCGGAATTGGTaG..ACGCGCACGGTTCAGGT....CCGTGT...GTCCGT............GAGGACGTGGGGGTTCAAGTCCCCC.CTCGCGCACCA tRNA-Leu-CAG-1-1 Sc: 74.2 >>>>>>>..>>>.............<<<.>>>>>...........<<<<<....>>>>................<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTGGTGGAATCGGTaG..ACACGCAGGATTTAGGT....TCCTGT...GCTTT..............CGAGCGTGAGGGTTCAAGTCCCTT.CTCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 67.5 .>....>..>>...............<<.>>>.>...........<.<<<.....>>>.>............<.<<<...>>>>>.......<<<<<.<....<..... AGTTCCGGGGCCGAGCAGG.....ACGCCTTTCCTGGATACacccGTAGAA..GGCGCAGGaTTACa....GCAGTGGACCGGGGTTCGATTCCCCG.CATCTCCACCA tRNA-Leu-TAG-2-1 Sc: 23.4 >>>>>>>..>>>.............<<<.>>>>>...........<<<<<....>>>>.>............<.<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGATTGGCGGAAT.GGCaG..ACGCGGAGCACTCAAAA....TGCTCT...GTCCGT............GAGGGCGTGTGGGTTCGAGTCCCAC.ATCCGGCA... tRNA-Leu-CAA-1-1 Sc: 68.3 >>>>>>>..>>>.............<<<.>>>>>...........<<<<<..............................>>>>>.......<<<<<.<<<<<<<.... GCCCCCGTAGTCCAATTGGCaG..AGACGGGCGACTTAAAA....TCGCTAcaG........................GTCAGGGTTCGAGTCCCTG.CGGGGGCA... tRNA-Leu-TAA-1-1 Sc: 60.5
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACCTCTAGCTCAATTGGCAGAGCAACTGACTCTTAATCAGTGG...........GtTCTCGGTTCAAGTCCGAGGGGGTGCACCA tRNA-Lys-CTT-1-1 Sc: 78.4 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTCTAGCTCAGTTGGTAGAGCAAGGGACTTTTAATCCCTGG...........GtCGTCGGTTCGAGCCCGACGGGGCCCACCA tRNA-Lys-TTT-1-1 Sc: 83.2
Met/Ile2 tRNAs
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTTcGGT.AGCTCGCTGGGCTCATAACCCAGAG...........GtCGTAGGTTCAAATCCTGCCCCCGCAA... tRNA-fMet-CAT-1-1 Sc: 74.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGGGTAGCTCAGGT.GGTtAGAGCACACGGCTCATAATCGTGGT...........GtCGCGGGTTCAAGTCCCGCTCCCGCTA... tRNA-Met-CAT-1-1 Sc: 68.6 GGGGCGGTAGCTCAGCT.GGTcAGAGCAGCGGACTCATAATCCGTCG...........GtCATGGGTTCAAGTCCCATCCGCCCTA... tRNA-Ile2-CAT-1-1 Sc: 81.0
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTGGGTAGCTCAGTTGGTAGAGCGTTCGACTGAAAATCGAAAG...........GtCCGCGGATCGACGCCGCGTCCAGGCACCA tRNA-Phe-GAA-1-1 Sc: 67.4
Pro tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGCTGTGGCGCAGCTtGGT.A.GCGCACTTGACTGGGGGTCAAGGG...........GtCGCAGGTTCAAATCCTGTCAGCCCGA... tRNA-Pro-GGG-1-1 Sc: 72.0 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGTTtGGT.A.GCGCGCTTCGTTCGGGACGAAGAG...........GtCGCAGGTTCAAATCCTGTTACCCCGA... tRNA-Pro-CGG-1-1 Sc: 73.5 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCGTAGCGTAGT..GGCtA.GCGCGTCCGCTTTGGGAGCGGAAG...........AcCGCAGGTTCGAGTCCTGTCGCCCCGACCA tRNA-Pro-TGG-1-1 Sc: 80.6
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>.........<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGATTCGCCTAGT..GGCctA.TGGCGCACGCTTGGAAAGCGTGTTGGGT..GAAA...GCCCTCAGGGGTTCGAATCCCCT..ATCCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 73.7 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>>.....<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGTGGCGTGTCCGAGC..GGCctA.AGGAGCACGCCTCGAAAGCGTGT.GTGGGGGAGA.CTCCAC.CGTGGGTTCAAATCCCAC..CGCCACCGCCA tRNA-Ser-CGA-1-1 Sc: 80.8 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<..>>>>.........<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGGCTGTCCGAGC..GGCcgA.TGGAGCCAGTCTTGAAAACTGGTGGGCA..GAGA...TGTCTCGTGGGTTCGAATCCCAC..GCCCTCCG... tRNA-Ser-TGA-1-1 Sc: 62.3 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<..>>>>>>.....<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGACGTCGCATAGTTcGGCctA.GTGCACCACCCTGCTAAGGTGGA.GTACCCGTAT.GGGTAC.CGTGGGTTCAAATCCCAC..CGTCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 83.6
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCATAGCTCATT.GGTA.GAGCACTTCCTTGGTAAGGAAGAG...........GtAGTGAGTTCAATCCTCACTGGGGGCT... tRNA-Thr-GGT-1-1 Sc: 65.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCTTAGCTCAGTCGGTA.GAGCATCTCACTCGTAATGAGAAG...........GtCGTCAGTTCGATTCTGACAGGCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 86.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGCCTGGCGCAATTGGTA.GCGCACCGCACTTGTAATGCGGCG...........GtTACGGGTTCGAGTCCCGTGGCCGGCT... tRNA-Thr-TGT-1-1 Sc: 78.2
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGTGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAG...........GtTGCAGGTTCGAGTCCTGTCCGCCCTG... tRNA-Trp-CCA-1-1 Sc: 78.5
Tyr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGCGAGTTACCCTAGCGGCcaA.AGGGATCTGACTGTAAATCAGACGGCTCA.....GCCTtCGGGGGTTCGAATCCCTC.ACTCGCCA... tRNA-Tyr-GTA-1-1 Sc: 71.2
Val tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GAGCGATTGGCGCAGC.GGTA.GCGCGCTTCCCTGACACGGAAGAG...........GtCGCTGGTTCGATCCCAGTATCGCTCACCA tRNA-Val-GAC-1-1 Sc: 79.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGATTGGCGCAGTTGGTA.GCGCGCTTCCTTCACACGGAAGAG...........GtCATCGGTTCGAGTCCGGTATCGCCCA... tRNA-Val-CAC-1-1 Sc: 76.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTTTAGCTCAGTTGGTA.GAGCGCCACGTTTACACCGTGGAT...........GtCGTCGGTTCGAGCCCGGCAGGGCCCA... tRNA-Val-TAC-1-1 Sc: 72.5