Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATGGCGCAGCTGGTAGCGCATCACACTGGCAGTGTGGGG...........GtCACGGGTTCGAATCCCGTTAGCTCCA... tRNA-Ala-GGC-1-1 Sc: 72.9 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCATTAGCTCAATTGGTAGAGCATCTGCTTTGCAAGCAGAAG...........GtCAGGAGTTCGATTCTCCTATGCTCCA... tRNA-Ala-TGC-1-1 Sc: 81.4 GGGGCATTAGCTCAATTGGTAGAGCATCTGCTTTGCAAGCAGAAG...........GtCAGGAGTTCGATTCTCCTATGCTCCA... tRNA-Ala-TGC-1-2 Sc: 81.4 GGGGCATTAGCTCAATTGGTAGAGCATCTGCTTTGCAAGCAGAAG...........GtCAGGAGTTCGATTCTCCTATGCTCCA... tRNA-Ala-TGC-1-3 Sc: 81.4
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCAACGGAt.A.GAGCATCTGACTACGGATCAGAAG...........GtTGGGGGTTCGAATCCCTCCGGGCGCACCA tRNA-Arg-ACG-1-1 Sc: 85.1 GCGCCCGTAGCTCAACGGAt.A.GAGCATCTGACTACGGATCAGAAG...........GtTGGGGGTTCGAATCCCTCCGGGCGCA... tRNA-Arg-ACG-2-1 Sc: 78.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCTCCGTAGCTCAGTGGAt.A.GAGCATTGGTTTCCGGTACCAAAG...........GtCGCAAGTTCGAATCTTGTCGGGGACA... tRNA-Arg-CCG-1-1 Sc: 65.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCTAGTAGCTCAGTGGAt.A.GAGCACGGCTCTCCTAAAGCCGGT...........GtCGGAGGTTCGATTCCTCTCTGGGGCA... tRNA-Arg-CCT-1-1 Sc: 71.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCCATAGCTCAGTGGAttA.GAGCAGTCGGCTTCTACCCGATTG...........GtCGCGGGTTCGAATCCTGCTGGGGGCA... tRNA-Arg-TCT-1-1 Sc: 71.2
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCCCCATAGCTCAATTGGCAGAGCATTCGACTGTTAATCGAAGG...........GtTACTGGTTCGAGTCCAGTTGGGGGAG... tRNA-Asn-GTT-1-1 Sc: 72.3
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCTGTGGCGCAGTTGGTtAGCGCGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCAAGTCCCGTCAGGGTCG... tRNA-Asp-GTC-1-1 Sc: 80.4 GGCCCTGTGGCGCAGTTGGTtAGCGCGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCAAGTCCCGTCAGGGTCG... tRNA-Asp-GTC-1-2 Sc: 80.4
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTGGAATGGCCGAGTGGTG.AGGCAACGGTCTGCAAAACCGTGC...........ACACGGGTTCGATTCCCGTTTCCACCT... tRNA-Cys-GCA-1-1 Sc: 69.5
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCCCGTTCGTCTAGCGGCctA.GGACGTCGGCCTCTCACGCCGGTA...........ACACGGGTTCAAATCCCGTACGGGGTA... tRNA-Glu-CTC-1-1 Sc: 60.0 GCCCCGTTCGTCTAGCGGCctA.GGACGTCGGCCTCTCACGCCGGTA...........ACACGGGTTCAAATCCCGTACGGGGTA... tRNA-Glu-CTC-1-2 Sc: 60.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCCCATCGTCTAGGGGCctA.GGACACCGCCCTTTCACGGCGGCG...........ACACGGGTTCGAATCCCGTTGGGAGTACCA tRNA-Glu-TTC-1-1 Sc: 67.6
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<.... TGGCCTATGGTGTAATTGGCAACACTACGGTTTCTGGTACCGTC...........AtTCTAGGTTCGAGTCCTGG.TAGGCCAG... tRNA-Gln-CTG-1-1 Sc: 49.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<.... TTCCCCATGGTGTAATCGGCAACACTACGGTTTTTGGTACCGTC...........AtTCTAGGTTCGAGTCCTGG.TGGGGAAG... tRNA-Gln-TTG-1-1 Sc: 42.1
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGATGTAGCGCAGTTGGT.A.GCGCATCACCTTGCCAAGGTGAGG...........GtCGCGAGTTCGAGTCTCGTCATCCGCT... tRNA-Gly-GCC-1-1 Sc: 82.3 GCGGATGTAGCGCAGTTGGT.A.GCGCATCACCTTGCCAAGGTGAGG...........GtCGCGAGTTCGAGTCTCGTCATCCGCT... tRNA-Gly-GCC-1-2 Sc: 82.3 GCGGATGTAGCGCAGTTGGT.A.GCGCATCACCTTGCCAAGGTGAGG...........GtCGCGAGTTCGAGTCTCGTCATCCGCT... tRNA-Gly-GCC-1-3 Sc: 82.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGATGTAGTTCAAT.GGT.A.GAACATCAGCTTCCCAAGCTGAAT...........A.CGCGGGTTCGATTCCCGTCATCGGCT... tRNA-Gly-CCC-1-1 Sc: 77.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGAATGTCGTATAGT.GGCtA.ATACCTCAGCCTTCCAAGCTGAAG...........A.CGCGGGTTCGATTCCCGTCATTCCCTCCA tRNA-Gly-TCC-1-1 Sc: 74.4
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGCTGTAGTTCAGCTGGTAGAGCACCAGGTTGTGATCCTGGGT...........GtCGCGGGTTCGAGCCCCGTCAGCCACC... tRNA-His-GTG-1-1 Sc: 65.4
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAGTCGGTtAGAGCGCATCGCTGATAACGATGAG...........GtCGCAAGTTCGATTCTTGCTAGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 88.2 GGGCCTATAGCTCAGTCGGTtAGAGCGCATCGCTGATAACGATGAG...........GtCGCAAGTTCGATTCTTGCTAGGCCCACCA tRNA-Ile-GAT-1-2 Sc: 88.2
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGTCGGTtAGAGCCGCGGACTCATAATCCGTTG...........GtCCCGGGTTCGAGCCCCGGTGGCCCCA... tRNA-Ile2-CAT-1-1 Sc: 77.4
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCGGGTGGCGGAAT.GGCaG.ACGCGCTAGCTTGAGGTGCTAGT.GTCCTACTAa.....CGGACG.TGGGGGTTCAAGTCCCCC.CTCGGGCA... tRNA-Leu-GAG-1-1 Sc: 57.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCAGGTGGCGGAATTGGCaG.ACGCGCTGGCTTCAGGTGCCAGT.GTTC.GCAA.......GGACG.TGGGGGTTCAAGTCCCCC.CCTGGGCA... tRNA-Leu-CAG-1-1 Sc: 69.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>..............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGCCCGTGGCGGAATTGGCaG.ACGCGCTGGATTTAGGTTCCAGT.GTC..TTAG........GACG.TGAGAGTTCAAGTCTCTC.CGGGCGCA... tRNA-Leu-TAG-1-1 Sc: 66.1 >>>>>>>..>>>............<<<.>>>>.........<<<<.........................>>>>>.......<<<<<.<<<<<<<.... GCCCCTGTATCCCAATTGGCaG.AGGAAACGGATTCAAAACCCGTGC....................AgTGTGAGTTCGAGTCTCAC.CAGGGGCACCA tRNA-Leu-CAA-1-1 Sc: 63.1 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.........................>>>>>.......<<<<<.<<<<<<<.... GCCCCCATAGCCCAATCGGCaG.AGGCAATCGACTTAAAATCGATTC....................AgTGTGGGTTCGAGTCCCAC.TGGGGGCACCA tRNA-Leu-TAA-1-1 Sc: 71.5
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCATTAGCTCAATTGGCAGAGCAACTGACTCTTAATCAGTGG...........GtTCGGGGTTCAAGTCCCTGATGGCGCA... tRNA-Lys-CTT-1-1 Sc: 77.0 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGGCCTTTAGCTCAGCTGGTAGAGCTACGGACTTTTAATCCGCAG...........GtCCCGGGTTCGAGCCCCGGAGGGCCCA... tRNA-Lys-TTT-1-1 Sc: 71.6
Met tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGTGTAGCTCAGTGGTA.GAGCAAACGACTCATAATCGTTGT...........GtCGAGAGTTCAATTCTCTCCATCGCTA... tRNA-Met-CAT-1-1 Sc: 68.2
fMet tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCTcGGTAGCTCGCTGGGCTCATAACCCAGAG...........GtCGTAGGTTCGAATCCTGCCCCCGCTA... tRNA-fMet-CAT-1-1 Sc: 74.4
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCAGATAGCTCAGTCGGTAGAGCACACGCCTGAAAAGTGTGGG...........GtCGCCAGTTCGATCCTGGCTCTGGCCA... tRNA-Phe-GAA-1-1 Sc: 74.4
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGACTATGGCGCAGCTtGGTAGCGCACTTGACTGGGGGTCAAGGG...........GtCGCAGGTTCAAATCCTGTTAGTCCGA... tRNA-Pro-GGG-1-1 Sc: 68.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGATATGGCGCAGCTtGGTAGCGCGCCTCGTTCGGGACGAGGAG...........GtCGCAGGTTCAAATCCTGTTATCCCGACCA tRNA-Pro-CGG-1-1 Sc: 80.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGACGTGGCGCAGTTtGGTAGCGCACCTGCTTTGGGAGCAGGGG...........GtCGCAGGTTCAAATCCTGTCGTCCCGA... tRNA-Pro-TGG-1-1 Sc: 79.1
Ser tRNAs
>>>>>>..>...>>>..............<<<..........>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGA..TTC.GACTAGCGGCctA...TGTCA.........CACGCCTGGAACGCGTGCGGGTT..TCAC......GACCCtCGTGGGTTCAAATCCCAC..ATCCTCCG... tRNA-Ser-GGA-1-1 Sc: 60.3 >>>>>>..>....>>..............<<...........>>>>>.......<<<<<..>>>>>>........<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGTAGC..GTG.TCCGAGCGGCcgA...AGGTG.........TTCGCCTCGAAAGCGAAT.GTTGGGTAAC...CCCCAAC..CGCGGGTTCAAATCCCGC..CGCTACCGCCA tRNA-Ser-CGA-1-1 Sc: 71.7 >>>>>...>...>>.>............<.<<..........>>>>>.......<<<<<.........................>>>>>.......<<<<<..<.<<<<<.... GCGCTAtaGTAtGCACA..GGT..A...GAGCAgaattcgaaTCTGACTACGGATCAGAAG....................GtTGGGGGTTCGAATCCCTC..CGGGCGCA... tRNA-Ser-CGA-2-1 Sc: 34.4 >>>>>>..>...>>>..............<<<..........>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAT..GTG.GCAGAGCGGCcgA...ATGCA.........CTGGTCTTGAAAACCAGCGGTGG..GAAA......CCATC.CCAGGGTTCAAATCCCTG..CGTCTCCG... tRNA-Ser-TGA-1-1 Sc: 68.7 >>>>>>..>...>>>..............<<<..........>>>>>.......<<<<<..>>>>>>........<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAC..GTG.CCAGAGCGGCcgA...ATGGG.........GCTCCCTGCTAAGGAGTTGACTTGTTTGC....GCAGGTC.CGGAGGTTCAAATCCTCT..CGTCTCCG... tRNA-Ser-GCT-1-1 Sc: 64.1
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAG...........GtCGACAGTTCGATTCTGTCAGGGGGCT... tRNA-Thr-GGT-1-1 Sc: 72.0 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCGCCTTAGCTCAGTCGGTAGAGCGCTTCACTCGTAATGAAAAG...........GtCGCGAGTTCGATTCTCGCAGGCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 86.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGGAGTGGCGCAATTGGTAGCGCAACGCACTTGTAATGCGTAG...........GtTGCGAGTTCAAGTCTCGTCTCCAGCT... tRNA-Thr-TGT-1-1 Sc: 76.4
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGCGTAGTTCAATTGGTAGAGCAACGGTCTCCAAAACCGTAG...........GtTGCAGGTTCAAGTCCTGTCGCCCCTG... tRNA-Trp-CCA-1-1 Sc: 76.2
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCAGGTTGCCCGAGCGGCcaA.AGGGAGCGGACTGTAAATCCGTCGGCA.......tTGCCTaCAGAAGTTCGAATCTTCT.ACCTGGCA... tRNA-Tyr-GTA-1-1 Sc: 62.9
Val tRNAs
>>>>>.>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<<.... GCGCGTTTAGCTCAGC.GGGA.GAGCGCTTCCCTGACACGGAAGAG...........GtCACTGGTTCAATCCCAGTATCGCGCA... tRNA-Val-GAC-1-1 Sc: 65.4 GCGCGTTTAGCTCAGC.GGGA.GAGCGCTTCCCTGACACGGAAGAG...........GtCACTGGTTCAATCCCAGTATCGCGCA... tRNA-Val-GAC-1-2 Sc: 65.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCTATGGCTCAGT.GGAA.GAGCGTTCCGTTCACACCGGAAAG...........GtCGCTGGTTCGATCCCAGCTAGGACCA... tRNA-Val-CAC-1-1 Sc: 67.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCTTTAGCTCAGCTGGGA.GAGCAGCTGGTTTACACCCAGCAG...........GtCGGCGGTTCGATCCCGTCAGGGCGCA... tRNA-Val-TAC-1-1 Sc: 71.7
SeC tRNAs
Sup tRNAs