Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCTTAGCTCAGCTGGGAGAGCGCATGGCTGGCAGCCATGAG...........GtCAGGGGTTCGATCCCCCTAGGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 77.3 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATGTAGCTCAGTTGGGAGAGCATCACGTTCGCAACGTGGGG...........GtCGTGGGTTCGAATCCCATCATCTCCACCA tRNA-Ala-CGC-1-1 Sc: 84.8 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCATTAGCTCAGCTGGGAGAGCGCGGGCTTTGCAAGCCTGAG...........GtCAGGGGTTCGATCCCCCTATGCTCCACCA tRNA-Ala-TGC-1-1 Sc: 81.3
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCGTTACCTCAGCTGGAtA.GAGGGACTGACTACGAATCAGTAC...........GtCGGGGGTTCGAATCCCTCACGGCGCACCA tRNA-Arg-ACG-1-1 Sc: 81.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCTTGTAGCTCAGG.GGAtA.GAGCGTCTGCCTCCGGAGCAGAAA...........GcCGCAGGTTCGAATCCTGTCAAGGGCGCCA tRNA-Arg-CCG-1-1 Sc: 82.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCCGTAGCTCAGG.GGAcA.GAGCACCGCTCTCCTAAAGCGGGT...........GcCGCGCGTTCGAATCGCGCCGGGGGCACCA tRNA-Arg-CCT-1-1 Sc: 76.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTGGCTCAAT.GGAtA.GAGCAACGGACTTCTAATCCGTCG...........GtTGCAGGTTCGAGTCCTGCCGGGCGCGCCA tRNA-Arg-TCT-1-1 Sc: 87.5
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCTCGGTAGCTCAACGGCA.GAGCATCCGGCTGTTAACCGGAGG...........GtTGTAGGTTCGAATCCTACCCGGGGAGCCA tRNA-Asn-GTT-1-1 Sc: 79.1
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGTGTTAGCTCAGTTGGTtAGAGCGCCGGCCTGTCACGTCGGAG...........GtCGCGAGTTCGAGTCTCGTACATCCCGCCA tRNA-Asp-GTC-1-1 Sc: 83.9 GGGGTGTTAGCTCAGTTGGTtAGAGCGCCGGCCTGTCACGTCGGAG...........GtCGCGAGTTCGAGTCTCGTACATCCCGCCA tRNA-Asp-GTC-1-2 Sc: 83.9
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCGACGTGGCCAAGTGGTA.AGGCAGAGGCCTGCAAAGCCTTCA...........CCCCCGGTTCGAATCCGGGCGTCGCCTCCA tRNA-Cys-GCA-1-1 Sc: 79.3
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTCCGTCGTCTAGCGGTttA.GGACGCCGCCCTCTCAAGGCGGAG...........GtCGCCGGTTCGAATCCGGTCGGAGCTACCA tRNA-Glu-CTC-1-1 Sc: 79.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCCCCATAGTCTAGAGGTc.A.GGACGCGGCCCTTTCAAGGCTGAG...........A.CACGGGTTCGATTCCCGTTGGGGGCACCA tRNA-Glu-TTC-1-1 Sc: 71.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>.........<<<<<<<<<<<.... GCCCCCATCGTCTAGCGGCcaA.GGACGCCGGCTCTTCAAGCCGGAA...........A.CGGAGATTCGAATCCTCCTGGGGGCACCA tRNA-Glu-TTC-2-1 Sc: 61.3
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... TGGGGTGTCGTCTAATGGCA.GGACAGCGGTTTCTGGTACCGTAT...........GTGAGGGTTCGACTCCTTCCACCCCAGCCA tRNA-Gln-CTG-1-1 Sc: 61.7 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... TGGGCCATCGTCCAACGGCA.GGACTCTGGTTTTTGGTACCAGCT...........ATCCAGGTTCGAATCCTGGTGGCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 60.2
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGACGTGGCTCAGCTGGTA.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGGGTTCGAACCCCGTCGTCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 87.1 GCGGACGTGGCTCAGCTGGTA.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGGGTTCGAACCCCGTCGTCCGCTCCA tRNA-Gly-GCC-1-2 Sc: 87.1 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTCGCCAAGT.GGTA.AGGCCCAAGCTTCCCAAGCTTGTA...........TtCGCGGGTTCGAGTCCCGTCACCCGCTCCA tRNA-Gly-CCC-1-1 Sc: 79.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTGGTTCAAT.GGTA.GAACCTGAGCCTTCCAAGCTCATG...........A.CGCGGGTTCGATTCCCGTCACCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 82.8
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGGTGTAGTTCAGTCGGCtAGAACGCCAGATTGTGGCTCTGGAG...........GtCGTGGGTTCGAGTCCCATCATCCACCCCA tRNA-His-GTG-1-1 Sc: 74.4
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GGGCCCGTAGCTCAGTTGGTtA.GAGCGCACGCCTGATAAGCGTGAG...........GtCGCTGGTTCAAATCCATTCGGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 81.3
Ile2 tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAATGGTG.GAGCAGGGGACTCATAATCCCTTG...........GtTGCAGGTTCGAGCCCTGCTGGGCCCACCA tRNA-Ile2-CAT-1-1 Sc: 81.1
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GTCGGAGTGGTGGAAC.GGCaG.ACACGCTAGCTTGAGGTGCTAGT.GCCCGTTTA.....AGGGTG.TGCGGGTTCAAATCCCGC.CTCCGACACCA tRNA-Leu-GAG-1-1 Sc: 67.5 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGCGTGGCGGAATTGGCaG.ACGCGTACGGTTCAGGTCCGTAT.GGGG.GCAA......CCCCA.TGGAGGTTCAAGTCCTCT.CGCCCGCACCA tRNA-Leu-CAG-1-1 Sc: 71.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGCGTGGCGGAATTGGCaG.ACGCGCCAGATTTAGGTTCTGGT.GGG..GAAA.......CTCG.TGAAGGTTCAAGTCCTTT.CGCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 70.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCGAGTGGCGGAAT.GGCaG.ACGCGGCGGTCTCAAAAACCGTT.GTC..TTA........GACG.TGCGGGTTCAAATCCCGC.CTCGGGCACCA tRNA-Leu-CAA-1-1 Sc: 79.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GGGGGCGTGGCGGAATTGGCaT.ACGCAGGAGACTTAAAATCTTCCGGCTT...........CGGCCtTGCGGGTTCGAGTCCCGC.CGCCCCTACCA tRNA-Leu-TAA-1-1 Sc: 69.5
Lys tRNAs
>>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGACTGTTAGCTTAGTTGGTAGAGCAGGGGACTCTTAATCCCAAG...........GtCCGGGGTTCGAGTCCCCGACAGTCCACCA tRNA-Lys-CTT-1-1 Sc: 80.7 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>.>>>.......<<<.<<<<<<<<.... GGGCCGTTAGCTCAGCTGGTAGAGCAGGGGACTTTTAATCCCAAG...........GtCGCGGGTTCGACTCCCTCACGGCCCACCA tRNA-Lys-TTT-1-1 Sc: 78.6
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGTGTAGCTCAGTTGGTtAGAGCACACGGTTCATACCCGTGGC...........GtCACTGGTTCAAATCCAGTCACCGCTACCA tRNA-Met-CAT-1-1 Sc: 75.8
fMet tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGCGGGGTGGAGCAGTCtGGTAGCTCGCCGGGCTCATAACCCGGAG...........GcCGTAGGTTCAAATCCTGCCCCCGCGACCA tRNA-fMet-CAT-1-1 Sc: 79.1
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GGTCGGGTAGCTCAGTTGGTAGAGCAGCGGACTGAAAATCCGCGT...........GtCGAGGGTTCAAGTCCCCCTCCGACCACCA tRNA-Phe-GAA-1-1 Sc: 78.2
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGTTGTGGCGCAGTTtGGTAGCGCACTTGACTGGGGGTCAAGGG...........GtCGCAGGTTCAAATCCTGTCAACCCGACCA tRNA-Pro-GGG-1-1 Sc: 77.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGTTGTGGCTCAGCTtGGTAGAGCGCTGCGTTCGGGACGCAGAG...........GcCGCAGGTTCAAATCCTGTCAACCCGACCA tRNA-Pro-CGG-1-1 Sc: 81.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGATGTGGCGCAGTTtGGTAGCGCGCCTGCTTTGGGAGCAGGAT...........GtCGCAGGTTCGAATCCTGTCATCCCGACCA tRNA-Pro-TGG-1-1 Sc: 84.7
Ser tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>>>.......<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGACCGAGCTGGCcgA.AGGTGCACGATTGGAAATCGTGT..GTGCTC.CAAAa.GAGTAC..CTAGGGTTCGAATCCCTA..TCTCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 71.3 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>>>.......<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAAGGGTGGCAGAGC.GGCtgA.ATGCGGCGGTCTCGAAAACCGTTT.CACCGGCGAC..CCCGGTGA.CCAGGGTTCAAATCCCTG..CCCTTCCGCCA tRNA-Ser-CGA-1-1 Sc: 75.3 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>...........<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGCGTGGCCGAGT.GGTtgA.AGGCGGCAGTCTTGAAAACTGTTA.AGCC...GCAA....GGCTT.CGTGGGTTCAAATCCTAC..CGCCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 86.4 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>...........<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAGCTGACCGAGA.GGCcgA.AGGTGCTCGCCTGCTAAGCGAGTAcACCC...CAAAa...GGGTGtCTGGGGTTCGAATCCCCA..GCTCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 71.0
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTGTGTAGCTCAGTCGGTA.GAGCACTTCCTTGGTAAGGAAGAG...........GtCGTCGGTTCAAGTCCGATCGCAGGCTCCA tRNA-Thr-GGT-1-1 Sc: 83.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAACGTGGCTCAGCTGGTA.GAGCAACGCACTCGTAATGCGTAG...........GtCAGCGGTTCGAATCCGCTCGTTGGCTCCA tRNA-Thr-CGT-1-1 Sc: 86.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAGTGTGGCGCAAC.GGTA.GCGCAACAGTTTTGTAAACTGTGG...........GtTGCAGGTTCGATTCCTGTCACTGGCTCCA tRNA-Thr-TGT-1-1 Sc: 82.2
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCCAGTAGCTCcAATTGGTAGAGCGGCGGTCTCCAAAACCGCAT...........GtTGGGGGTTCGAGTCCCTCCTGGCCTGCCA tRNA-Trp-CCA-1-1 Sc: 77.7
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>.>>.......<<.<...>>>>>.......<<<<<<<<<<<<.... GGGCGTGTGCCCGAGTGGCtaA.AGGGGACGGGCTGTAAACCCGTTGGCTA.......TGCCTaCCTAGGTTCGAATCCTAGCGCGCCCACCA tRNA-Tyr-GTA-1-1 Sc: 74.6
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGATTAGCTCAGGGGGA.GAGCACTACCTTGACACGGTAGGG...........GtCACAAGTTCAAATCTTGTATCGCCCACCA tRNA-Val-GAC-1-1 Sc: 79.2 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCGCTTGGCTCAGCGGGA.GAGCATCGCCTTCACACGGCGGGG...........GtCACAGGTTCAAATCCTGTAGCGACCACCA tRNA-Val-CAC-1-1 Sc: 77.3 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGGCGATTGGCGCAGCGGGA.GCGCAGGTCCCTTACAAGGACAAG...........GtCGGGGGTTCAAATCCCTCATCGCCCACCA tRNA-Val-TAC-1-1 Sc: 78.4
SeC tRNAs
>>>>>>>...>>>>>>....<<<<<<..>>>>.......<<<<...>>>>>>>>.....<<<<<<<<.>>>>>.......<<<<<...<<<<<<<.... GGAGATGGATGGGTCCTGGTGGGCTCCACGGCCTTCAAAGCCGCTGTGAGGCGTGCAGaACGTCTCGGGTGTGTTCGATTCGCAC..ACATCTCCgcca tRNA-SeC-TCA-1-1 Sc: 101.1
Sup tRNAs