Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGGTATAGCTCACTTGGTAGAGCGTCTGCTTTGCACGCAGAAG...........GcAAGCGGTTCGATTCCGCTTACCTCCA... tRNA-Ala-TGC-1-1 Sc: 70.4
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACCCTTAGCTCAGCTGGAtA.GAGTTTTTGACTACGGATCAAAAG...........GtCGGGCGTTCGAATCGCTCAGGGTGCACCA tRNA-Arg-ACG-1-1 Sc: 72.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACTTATAGCTCAGT.GGAtA.GAGCGTTACCCTCCGGAGGTAAAA...........GtCGCAGGTTCAAATCCTGCTAAGTGCA... tRNA-Arg-CCG-1-1 Sc: 74.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCTCAGTAGGAtA.GAGCGTTGGATTCCTAATCCGAAG...........GcCGTGCGTTCAAATCGCACCAGTCCCG... tRNA-Arg-CCT-1-1 Sc: 66.2 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GTGCCCGTAGCTCAGCTGGAtA.GAGCACCAGCCTTCTAAGCTGTGG...........GtCAGGGGTTCGAATCCCTTCGGGCACACCA tRNA-Arg-TCT-1-1 Sc: 80.4
Asn tRNAs
>>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... TCCTCGGTAGCTCAGTGGTA.GAGCACTTGGCTGTTAACCAATTG...........GtCGCTGGTTCGAATCCGGCCCGGGGAG... tRNA-Asn-GTT-1-1 Sc: 68.4
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGGCGTAGTTTAGTTGGTtAGAACATAAGCCTGTCACGCTTAAG...........GtCGCGAGTTCGAGTCTCGTCGCTCCCG... tRNA-Asp-GTC-1-1 Sc: 74.0
Cys tRNAs
>>>>>>>..>>>...........<<<..>>>>.......<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTAGGTGGCAGAATGGCgG.ATGCGCAGGACTGCAAATCCTTAC...........ATACCGGTTCGATTCCGGTCCTAGCCTCCA tRNA-Cys-GCA-1-1 Sc: 62.2
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGATGTCGCCAAGTGGTA.AGGCAACGGTTTTTGATACCGTCA...........TtCGGAGGTTCGAACCCTTCCATCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 69.5
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GACTCCTTCGTCTAGTGGTctA.GGACCCCACCCTTTCACGGTGGTA...........ACGCGGGTTCGACTCCCGTGGGAGTCA... tRNA-Glu-TTC-1-1 Sc: 57.0
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAGTAGCTTAGTTGGTA.GAGCGTTACCTTGCCAAGGTAAAG...........GtCGAGGGTTCGAACCCCTTTTCCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 83.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTATAGCTCAAT.GGTA.GAGTCCCAGCCTTCCAAGCTGGCT...........A.CGTGGGTTCGATTCCCACTATCCGCT... tRNA-Gly-TCC-1-1 Sc: 70.3
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGCTCAGTTGGTAGAGCGTCAGTTTGTGGCACTGAAG...........GtCGCCAGTTCAATCCTGGTCATTCGCC... tRNA-His-GTG-1-1 Sc: 61.7
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTTTGTAGCTCAGGTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGAAGTTCAACTCTTCCCAGGCCCA... tRNA-Ile-GAT-1-1 Sc: 69.7
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGTTGTGGTGGAAT.GGTaG.ACACGCAGCGTTGAGGTCGCTGTGGTTTGATAa...AAACCtTGGAAGTTCGAGTCTTCT.CAACCGCACCA tRNA-Leu-GAG-1-1 Sc: 64.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>.>..........<.<...>>>>>.......<<<<<.<<<<<<<.... GCCCGAATGGCGGAAT.GGTaG.ACGCGCTAGCTTCAGGTGCTAGTAATTATTAC....GATTG.TGGAAGTTCAACTCTTCT.TTCGGGCA... tRNA-Leu-CAG-1-1 Sc: 52.8 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGATATGGCGGAATTGGTaG.ACGTGCTAGGTTTAGGTCCTAGT.AAG.GAAA.....CTTG.TGGGGGTTCAAGTCCCTC.TATCCGCA... tRNA-Leu-TAG-1-1 Sc: 60.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCCTATGGCGGAAT.GGTaG.ACGCGGTAGACTCAAAATCTACT.ATTCGAAA....GGATA.TGCTGGTTCAAGTCCGGC.TAGGGGTA... tRNA-Leu-CAA-1-1 Sc: 59.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCACGTGGCGGAATCGGTaG.ACGTTGCGGACTTAAAATCCGTTGATCAATTA....AGATCgTGGGAGTTCAAGTCTCCC.CGTGGGCACCA tRNA-Leu-TAA-1-1 Sc: 65.4
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GATCCCGTAGCTCAGTTGGTAGAGCGATTGACTCTTAATCAGTAT...........GtCGTGTGTTCGAATCACACCGGGATCA... tRNA-Lys-CTT-1-1 Sc: 71.4 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GATCCCGTAGCTCAGTCGGTAGAGCGTCTGACTTTTAATCAGCAG...........GtCGCGCGTTCAATTCGCGCCGGGATCA... tRNA-Lys-TTT-1-1 Sc: 70.7
Met/Ile2 tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>.>>>.......<<<<<<<<<<<<.... TGCGGGGTAGAGCAGTCtGGT.A.GCTCGACAGGCTCATAACCTGTAG...........GtCGCtCGGTTCAAATCCGGTCCCCGCAA... tRNA-fMet-CAT-1-1 Sc: 65.6 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>..>>>.......<<<.<<<<<<<<.... GGCTAAGTAGCTCAGT..GGT.A.GAGTAGGAGAATCATAATCTCTCG...........GtCGC.GGGTTCGAATCCCTCCTTAGCCA... tRNA-Met-CAT-1-1 Sc: 65.0 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<................>..>>>.......<<<.<<<<<<<<.... GGCTAAGTAGTTCAGT..AGC.A.TAGTAGGAGAATCATAATTTCTCA...........GtCGC.GGGTTCAAATCCCTCCTTAGCCA... tRNA-Met-CAT-2-1 Sc: 39.0 >>>>>>>..>>>>...........<<<<..>>>>.......<<<<.................>>.>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCTCAGTT.GGTtG.GAGCGGATCGCTCATAACGATATG...........GcCGT.AGGTTCAAGTCCTACCAGCCCTA... tRNA-Ile2-CAT-1-1 Sc: 71.4
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTTGATAGCTCAGTTGGTAGAGCAAAGGACTGAAAATCCTTGT...........GtCGTTGGTTCAATTCCAACTCAAGCCA... tRNA-Phe-GAA-1-1 Sc: 74.9
Pro tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGAATGTAGCGCAGCCtGGTttAGCGTGTCAGTCTGGGGGACTGGAG...........GtCGTGGGTTCAAATCCCATCATTCCGACCA tRNA-Pro-GGG-1-1 Sc: 65.6 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGAGCGTGGCGCAGCCtGGT..AGCGCACTTGGTTTGGGACCAAGTG...........GtCGGGAGTTCAAATCTCTCCGCTCCGACCA tRNA-Pro-TGG-1-1 Sc: 76.4
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>>.......<<<<<<.>>>>>.......<<<<<..<<<<<<<.... GGAAAGGTGGCTGAGTGGTctA.AAGCGCACGCCTGGAAAGTGTGTATGCAG.TAAT.CCTGTATCGAGGGTTCGAATCCCTC..TCTTTCCGCCA tRNA-Ser-GGA-1-1 Sc: 79.4 >>>>>>>..>>>............<<<..>>>>.......<<<<..>>>>>>.......<<<<<<.>>>>>.......<<<<<..<<<<<<<.... GGATGGATGGCCGAGCGGTttA.AGGCACCAGTCTTGAAAACTGACGTACGT.TAATa.GCGTACCGTGGGTTCGAATCCCAC..TCCATCCG... tRNA-Ser-TGA-1-1 Sc: 76.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>>.......<<<<<<.>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCCGAGAGGCtgA.AGGCGACGGTTTGCTAAACCGTTATACGGCTTTAaCCCGTATCGAGGGTTCGAATCCCTC..TCTCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 84.6
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGTTATAGCTTAGT.GGCA.AAGCACATCATTGGTAATGATGAG...........A.CCTAAGTTCGATTCTTGGTAACGGCA... tRNA-Thr-GGT-1-1 Sc: 66.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGCTTAGCTCAACTGGGA.GAGCATCTGATTTGTAATCAGAGG...........GtTATGAGTTCAAGTCTTATAGCCGGCA... tRNA-Thr-TGT-1-1 Sc: 72.4
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGAGTGTAGCTCAATTGGCtAGAGCGTCAGTCTCCAAAACTGAAG...........GtTATGGGTTCGATTCCTATCACTCCTG... tRNA-Trp-CCA-1-1 Sc: 74.3
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>..>......<..<<..>>>>>.......<<<<<<<<<<<<.... GGAGGAGTGGCCGAGCGGTcaA.AGGCAGCAGACTGTAAATCTGCCCACTAG......CGTGTACGTAGGTTCAAATCCTACCTCCTCCA... tRNA-Tyr-GTA-1-1 Sc: 69.3
Val tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTAATTAGCTCATTTGGTtAGAGCACTTGCTTGACGTGCAAGAG...........GtGACTGGTTCGAATCCAGTATTGCCCA... tRNA-Val-GAC-1-1 Sc: 67.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGGTTAGCTCAGTTGGT.AGAGCGTCTCGTTTACACCGAGAGG...........GtCAGCAGTTCGAGTCTGTTATCGCCCA... tRNA-Val-TAC-1-1 Sc: 70.4