Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGGTATAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGG...........GtCAAGGGTTCGAATCCCTTTATCTCCA... tRNA-Ala-TGC-1-1 Sc: 80.7 GGGGGTATAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGG...........GtCAAGGGTTCGAATCCCTTTATCTCCA... tRNA-Ala-TGC-1-2 Sc: 80.7 GGGGGTATAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGG...........GtCAAGGGTTCGAATCCCTTTATCTCCA... tRNA-Ala-TGC-1-3 Sc: 80.7
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTACGTGTAGCTCAGCTGGAtAGAGCGTCTGGCTACGGACCAGAAG...........GtCGCGAGTTCGAATCTTGTCACGTACA... tRNA-Arg-ACG-1-1 Sc: 73.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTACATGTAGCTTAGCTGGAtAAAGCGTTCGCCTCCGGAGCGGAAG...........AtCGTGGGTTCGAATCCCATCATGTACA... tRNA-Arg-CCG-1-1 Sc: 67.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GTGTTCGTAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTGG...........GtCGAGGGTTCGAATCCCCCCGGGCACA... tRNA-Arg-TCT-1-1 Sc: 66.1
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCTCGATAGCTCAATGGTA.GAGCACTCGGCTGTTAACCGAGTT...........GtTGTAGGTTCGAGCCCTACTCGGGGAG... tRNA-Asn-GTT-1-1 Sc: 65.4 TCCTCGATAGCTCAATGGTA.GAGCACTCGGCTGTTAACCGAGTT...........GtTGTAGGTTCGAGCCCTACTCGGGGAG... tRNA-Asn-GTT-1-2 Sc: 65.4
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCTGGTGGCTCAGCTGGTtAGAGCGCCGCCCTGTCACGGCGGAG...........GtCGTGGGTTCGAACCCCATCCGGGTCG... tRNA-Asp-GTC-1-1 Sc: 75.1 GGCCTGGTGGCTCAGCTGGTtAGAGCGCCGCCCTGTCACGGCGGAG...........GtCGTGGGTTCGAACCCCATCCGGGTCG... tRNA-Asp-GTC-1-2 Sc: 75.1
Cys tRNAs
>>>>>>>..>>>..........<<<..>>>>.......<<<<................>>>>>.......<<<<<.<<<<<<<.... GGCGACATAGCCAAGTGGTA.AGGCGTGGGTCTGCAACACCCTG...........AtCACCAGTTCGAATCTGGT.TGTCGCCT... tRNA-Cys-GCA-1-1 Sc: 65.2
Glu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<.... GGCTTGTTGGTCAAGAGGCtA.AGACGCCGCCCTCTCACGGCGGA...........AtCAGGGGTTCGATTCCCCT.ACAAGCTA... tRNA-Glu-CTC-1-1 Sc: 61.1 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<.... GGCTCCATGGTCAAGCGGTtA.AGACACCACCCTTTCACGGTGGT...........AtCAGGGGTTCAAATCCCCT.TGGAGTCA... tRNA-Glu-TTC-1-1 Sc: 65.5 GGCTCCATGGTCAAGCGGTtA.AGACACCACCCTTTCACGGTGGT...........AtCAGGGGTTCAAATCCCCT.TGGAGTCA... tRNA-Glu-TTC-1-2 Sc: 65.5
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<....................>>>>>.......<<<<<.<<<<<<<.... TGGGCTTTCGCCAAGTGGTA.AGGCACTGGATTCTGATTCCAGCA..............TttCGGGGGTTCGAATCCCTC.AAGCCCAG... tRNA-Gln-CTG-1-1 Sc: 63.9 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....................>>>>>.......<<<<<.<<<<<<<.... TGGGCTATCGCCAAGCGGTA.AGGCACAGGGTTTTGATCCCTGCATTA..............CGCTGGTTCGAATCCAGC.TAGCCCAG... tRNA-Gln-TTG-1-1 Sc: 61.7
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCGAGTGGCTCAGTGGTG.GAGCACCTCCTTGCCAAGGAGGGG...........GtCGCGGGTTCGATCCCCGTCTCGCGCT... tRNA-Gly-GCC-1-1 Sc: 79.4 GCGCGAGTGGCTCAGTGGTG.GAGCACCTCCTTGCCAAGGAGGGG...........GtCGCGGGTTCGATCCCCGTCTCGCGCT... tRNA-Gly-GCC-1-2 Sc: 79.4 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAATGGTA.GAACACTAGCCTTCCAAGCTAGAT...........A.CGTGGGTTCGATTCCCATCACCCGCT... tRNA-Gly-TCC-1-1 Sc: 79.1 GCGGGTGTAGTTCAATGGTA.GAACACTAGCCTTCCAAGCTAGAT...........A.CGTGGGTTCGATTCCCATCACCCGCT... tRNA-Gly-TCC-1-2 Sc: 79.1
His tRNAs
>>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGGTATAGCACAGCTGGTcAGCGCGTCAGATTGTGGCTCTGAAG...........GtCCAGGGTTCGAATCCCTGTACCCACC... tRNA-His-GTG-1-1 Sc: 60.3
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGTCATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGAGGTTCGAGTCCTCTTGACCCCA... tRNA-Ile-GAT-1-1 Sc: 82.3 GGGGTCATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGAGGTTCGAGTCCTCTTGACCCCA... tRNA-Ile-GAT-1-2 Sc: 82.3
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GGACCTTTAGCTCAGTTGGTtAGAGCAACCGGCTCATAACCGGTCG...........GtCCTGGGTTCGAGTCCCCGAAGGTCCA... tRNA-Ile2-CAT-1-1 Sc: 72.5
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>..>.>.........<.<..<..>>>>>.......<<<<<.<<<<<<<.... GCAGTCGTGGCGGAATTGGCaT.ACGCGCTAGACTAAGGATCTAGTCCATATT.........GCTTGGGTGCGGGTTCAAGTCCCGC.CGACTGCA... tRNA-Leu-AAG-1-1 Sc: 59.6 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCAGAAGTGTCGGAAT.GGCaG.ACGAGCAAGATTCAGATTCTTGT.GCGG..GTTA.......CCGCGTGTGGGTTCAAGTCCCAT.CTTCTGCA... tRNA-Leu-CAG-1-1 Sc: 62.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>...............<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGATATGGCGGAATTGGCaG.ACGCGCTAGATTTAGGTTCTAGT.GTCAA...........CAGACGTGCAGGTTCAACTCCTGT.TATCCGCA... tRNA-Leu-TAG-1-1 Sc: 60.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCAGGTGTGGCGGAAT.GGCaG.ACGCAGCAGACTCAAAATCTGCC.GGTG..GTAA.......CATCGTGCGGGTTCAAGTCCCGC.CACCTGCA... tRNA-Leu-CAA-1-1 Sc: 72.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGTGTGGCGGAACTGGCaG.ACGCACAGGACTTAAAATCCTGC.GGGAC.TTATa.....CTCCCATACGGGTTCGATTCCCGT.TGCCGGCA... tRNA-Leu-TAA-1-1 Sc: 65.0 GCCGGTGTGGCGGAACTGGCaG.ACGCACAGGACTTAAAATCCTGC.GGGAC.TTATa.....CTCCCATACGGGTTCGATTCCCGT.TGCCGGCA... tRNA-Leu-TAA-1-2 Sc: 65.0
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACCGCTAGCTCAGTTGGTAGAGCACCTGACTCTTAATCAGGGT...........GtCCAGGGTTCGAACCCCTGGCGGTGCA... tRNA-Lys-CTT-1-1 Sc: 77.6 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCATAGCTCAGTTGGTAGAGCACTAGACTTTTAATCTAGGT...........GtCCCGGGTTCGAACCCCGGTGGGCTCA... tRNA-Lys-TTT-1-1 Sc: 73.5
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GGCGAGATAGCTCAGTTGGCtAGAGCACACGGTTCATACCCGTGGT...........GtCGTGGGTTCAAATCCCTCTCTCGCTA... tRNA-Met-CAT-1-1 Sc: 66.6
fMet tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTAGAGCAGCTcGGAAGCTCGTCGGGCTCATAACCCGAAG...........GtCACAGGTTCAAATCCTGTCCCCGCTA... tRNA-fMet-CAT-1-1 Sc: 71.4
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTAGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGT...........GtCACTGGTTCGATTCCGGTTCTAGGCA... tRNA-Phe-GAA-1-1 Sc: 70.6
Pro tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGCGTGTGGCTCAGTTtGGT.AGAGCGCGTGGTTCGGGACTACGAG...........GcCGCAGGTTCAAATCCTGTCACGCCGA... tRNA-Pro-CGG-1-1 Sc: 71.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCTCAGCTtGGCtAGAGCGCTTGATTTGGGATCAAGAG...........GtCGCAGGTTCGAATCCTGTCACCCCGA... tRNA-Pro-TGG-1-1 Sc: 78.1
Ser tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<<.... GGAGAGGTACCGAAGTGGTcatA.ACGGGGCGGTCTTGAAAACCGTTTGTCT..TCAC...GGGCGCATGGGTTCGAATCCCAT.CCTCTCCG... tRNA-Ser-TGA-1-1 Sc: 70.9 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>>.....<<<<<...>>>>>.......<<<<<.<<<<<<<.... GGAGTAGTACTCAAGAGGCtg.A.AGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGCAA.CCGGCG.CGAGGGTTCAAATCCCTC.CTGCTCCG... tRNA-Ser-GCT-1-1 Sc: 67.7
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTATTGTAGCTCAGG.GGTA.GAGCACTTCATTGGTAATGAAGAG...........GtCACGGGTTCAATTCCCGTCAATAGCT... tRNA-Thr-GGT-1-1 Sc: 72.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCACCTTGGCTCAGTCGGTA.GAGCGTTTCACTCGTAATGAAAAG...........GtCGCCGGTTCGATTCCGGCAGGTGGCT... tRNA-Thr-CGT-1-1 Sc: 79.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGACTTGGCTCAAT.GGCA.GAGCAGCTGATTTGTAATCAGCAG...........GtTGTTGGTTCGACTCCGACAGTCGGCT... tRNA-Thr-TGT-1-1 Sc: 70.6 GCCGACTTGGCTCAAT.GGCA.GAGCAGCTGATTTGTAATCAGCAG...........GtTGTTGGTTCGACTCCGACAGTCGGCT... tRNA-Thr-TGT-1-2 Sc: 70.6
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGGGGATTGGTCAAATGGTA.TGATAGGGGTCTCCAAAACCTTTG...........GTGGGAGTTCGATTCTCTCATCCCCTG... tRNA-Trp-CCA-1-1 Sc: 57.5
Tyr tRNAs
>>>>>>>..>>>............<<<..>>>>.......<<<<..>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<.... GGGTGGATTCCCGAGTGGCcaA.AGGGGACAGACTGTAAATCTGCTGGCA.......cTGCCTtCGAAGGTTCGAATCCTTC.TCCGCCCA... tRNA-Tyr-GTA-1-1 Sc: 57.8
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGTCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCACAGGTTCGAGCCCTGTAGGCCCCA... tRNA-Val-TAC-1-1 Sc: 77.8 GGGGTCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCACAGGTTCGAGCCCTGTAGGCCCCA... tRNA-Val-TAC-1-2 Sc: 77.8
SeC tRNAs
Sup tRNAs