Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTGGCGCAGCT.GGTAGCGCACCACACTGGCAGTGTGGGG...........GtCAGGGGTTCGAGTCCCCTCAGCTCCA... tRNA-Ala-GGC-1-1 Sc: 76.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCGCAGTCcGGTAGCGCACCTCGTTCGCATCGAGGGG...........GtCAGGGGTTCGAATCCCCTCAGCTCCA... tRNA-Ala-CGC-1-1 Sc: 75.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGACGTAGCTCAATT.GGCAGAGCACCGCCTTTGCAAGGCGGGG...........GtTAGGGGTTCGATTCCCCTCGTCTCCA... tRNA-Ala-TGC-1-1 Sc: 81.2
Arg tRNAs
>>>>>>>......................................>.>>>...................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<..<<<<<<<.... GCACCCG....................................TAG.CTCAAC..G.....GAtA....GAGCATCTGACTACGGATCAGAAG...........GtTAGGGGTTCGAATCCCTT..CGGGTGCA... tRNA-Arg-ACG-1-1 Sc: 75.7 >>>>>>>......................................>.>>>...................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<..<<<<<<<.... GCCCCCG....................................TAG.CTCAGG..G.....GAtA....GAGCACCGCCCTCCGGAGGCGGGT...........G.CGCAGGTTCGAATCCTGC..CGGGGGCA... tRNA-Arg-CCG-1-1 Sc: 76.9 >>>>>>>......................................>.>>>...................<<<<..>>>>.......<<<<.................>>>>>.......<<<<<..<<<<<<<.... GCCCCCG....................................TAG.CTCAGG..G.....GAtA....GAGCATCGGTTTCCTAAACCGTGT...........GtCGCAGGTTCGAATCCTGC..CGGGGGCACCA tRNA-Arg-CCT-1-1 Sc: 81.7 >>>>..>..........................................>...................<.....>>>>.......<<<<.................>>>>>.......<<<<<..<..<<<<.... GCCCAGG....................................TCAaGACCAT..G.....CCtA....G...ATCGGTTTCCTAAACCGTGT...........GtCGCAGGTTCGAATCCTGC..CGGGGGCA... tRNA-Arg-CCT-2-1 Sc: 30.3 >>>>>>>......................................>.>>>...................<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<..<<<<<<<.... GCGCCCG....................................TAG.CTCAGC..G.....GAtA....GAGCAGGTGCCTTCTAAGCACTTG...........GtCGCAGGTTCGATCCCTGC..CGGGCGCG... tRNA-Arg-TCT-1-1 Sc: 77.2 >>>>>>>......................................>.>>.....................<<<.>>>>>.......<<<<<................>>>>>.......<<<<<..<<<<<<<.... GCGTCCGggggcagtgaactccacccgccaccccaccccacct..G.CGT.GTTtGtccccGTgA.tc.TTGCAGGTGCCTTCTAAGCACTTG...........GtCGCAGGTTCGATCCCTGC..CGGGCGCG... tRNA-Arg-TCT-2-1 Sc: 34.7
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCCCCGTAGCTCAATTGGCAGAGCATGCGACTGTTAATCGCAGG...........GtTATTGGTTCGAGTCCAATCGGGGGAG... tRNA-Asn-GTT-1-1 Sc: 70.7
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCTGTAGCGCAGTTGGTtAGCGCGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCGAGTCCCGTCAGGGTCG... tRNA-Asp-GTC-1-1 Sc: 83.3
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTGGAGTGGCCGAGAGGCG.AGGCAACGGCCTGCAAAGCCGTCT...........ACACGGGTTCAAATCCCGTCTCCACCT... tRNA-Cys-GCA-1-1 Sc: 68.6
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCCGTCGTCTAGCGGCccA.GGACGCCGCCCTCTCACGGCGGTA...........GCGAGGGTTCGAATCCCTTCGGGGCTA... tRNA-Glu-CTC-1-1 Sc: 66.9 GGCCCCGTCGTCTAGCGGCccA.GGACGCCGCCCTCTCACGGCGGTA...........GCGAGGGTTCGAATCCCTTCGGGGCTA... tRNA-Glu-CTC-1-2 Sc: 66.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCCCCATCGTCTAGCGGTccA.GGACGCCGCCCTTTCAAGGCGGTA...........GCACGGGTTCGAACCCCGTTGGGGGCA... tRNA-Glu-TTC-1-1 Sc: 70.4
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATGGGGTAATTGGCAGCCCGACGGTTTCTGGTTCCGTTA...........G.TCTAGGTTCGAGTCCTGGTACCCCAG... tRNA-Gln-CTG-1-1 Sc: 49.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGGATGGGGTAATCGGCAGCCCGCCGGCCTTTGGAGCCGGGA...........AgTCTCGGTTCGAGTCCGAGTCCCCCAG... tRNA-Gln-TTG-1-1 Sc: 61.9
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGACGTGGCTCAGTTGGTA.GAGCATCACCTTGCCAAGGTGAGG...........GtCGCGGGTTCGAATCCCGTCGTCCGCT... tRNA-Gly-GCC-1-1 Sc: 86.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAAT.GGCA.GAACATCAGCTTCCCAAGCTGACA...........G.TGCGAGTTCGATTCTCGTCACCCGCT... tRNA-Gly-CCC-1-1 Sc: 74.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGCTCAAT.GGTA.GAGCCCCAGCCTTCCAAGCTGGCC...........A.TGCGGGTTCGATTCCCGTCACCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 82.7
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGGTGTAGCTCAGCTGGTAGAGCACCAGGTTGTGATCCTGGGT...........GtCGCGGGTTCGAGCCCCGTCACTCACCCCA tRNA-His-GTG-1-1 Sc: 72.7
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAGGCGGTtAGAGCGCATCCCTGATAAGGATGAG...........GcCGGAGGTTCAAGTCCTCCCAGGCCCA... tRNA-Ile-GAT-1-1 Sc: 79.2
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGGGCGGTAGCTCAGCTGGTcAGAGCATGGGACTCATAATCCCTGG...........GtCGTGGGTTCGAGCCCCACCCGCCCCA... tRNA-Ile2-CAT-1-1 Sc: 80.6
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GTCCGGGTGGCGGAAT.GGCaG.ACGCGCTAGCTTGAGGTGCTAGT.GCCCTTTAT.....CGGGCG.TGGGGGTTCAAGTCCCCC.CTCGGACA... tRNA-Leu-GAG-1-1 Sc: 54.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GGGCAAGTGGCGGAAT.GGCaG.ACGCGCACGGTTCAGGTCCGTGT.GTCC.GAGA......GGACG.TGGGGGTTCAACTCCCCC.CTTGCCCA... tRNA-Leu-CAG-1-1 Sc: 62.1 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTGGTGTAAC.GGCaG.CCACGCCAGACTTAGGATCTGGT.GCCTC.........CGGGCG.TGCGGGTTCGACTCCCGC.CTCCCGCA... tRNA-Leu-TAG-1-1 Sc: 65.0 >>>>>>>..>>>............<<<.>>>>.........<<<<........................>>>>>.......<<<<<.<<<<<<<.... GCCCCCGTACCCCAATCGGCaG.AGGGAGCGGATTCAAAACCCGCGC...................AgTGTGCGTTCGAGTCGCAC.CGGGGGCA... tRNA-Leu-CAA-1-1 Sc: 51.9 >>>>>>>..>>>............<<<.>>>>>.......<<<<<........................>>>>>.......<<<<<.<<<<<<<.... GCCCCCGTAGCCCAACTGGCaG.AGGCAGGCCCCTTAAAAGGGTCCC...................AgTGTCGGTTCGAACCCGAC.CGGGGGCA... tRNA-Leu-TAA-1-1 Sc: 56.4
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCATTAGCTCAATTGGCAGAGCAGCTGACTCTTAATCAGCGG...........GtTCGGGGTTCGAGTCCCTGATGGCGCA... tRNA-Lys-CTT-1-1 Sc: 78.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTCTAGCTCAACTGGCAGAGCAGCGGACTTTTAATCCGCGG...........GtTGTGGGTTCGATCCCCACGGGGCCCACCA tRNA-Lys-TTT-1-1 Sc: 82.0
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGTGTAGCTCAGCCaGGCAGAGCAAGCGGCTCATAATCGCTGT...........GtCACCGGTTCAAATCCGGTCACCGCTA... tRNA-Met-CAT-1-1 Sc: 62.2
fMet tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCTcGGTAGCTCGCTGGGCTCATAACCCAGAG...........GtCGCAGGTTCGAATCCTGCCCCCGCTACCA tRNA-fMet-CAT-1-1 Sc: 84.8 CGCGGGGTGGAGCAGCTcGGTAGCTCGCTGGGCTCATAACCCAGAG...........GtCACAGGTTCGAATCCTGTCCCCGCTA... tRNA-fMet-CAT-2-1 Sc: 75.7
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCAGGTAGCTCAGTCGGTaCGAGCGCTCGCCTGAAAAGCGAGAG...........GtCGGCGGTTCGACCCCGCCCCTGCCCA... tRNA-Phe-GAA-1-1 Sc: 76.9
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGCTGTAGCGCAGCTtGGTAGCGCACTTGACTGGGGGTCAAGGG...........GtCGCAGGTTCAAATCCTGTCAGCCCGA... tRNA-Pro-GGG-1-1 Sc: 73.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGCTtGGTAGCGCGCGTCGTTCGGGACGACGAG...........GtCGCAGGTTCAAATCCTGTCACCCCGA... tRNA-Pro-CGG-1-1 Sc: 73.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGCTtGGTAGCGCACCCGCTTTGGGAGCGGGGG...........GcCGTGGGTTCGAATCCCGCCACCCCGACCA tRNA-Pro-TGG-1-1 Sc: 84.5
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>..........<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGATTCGCCTAGT..GGCctA.TGGCGCTCGCTTGGAAAGCGGGTTGGGG..GCAA....CCCCT.CGGGAGTTCGAATCTCCC..ATCCTCCG... tRNA-Ser-GGA-1-1 Sc: 68.6 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>..........<<<<...>>>>>.......<<<<<..<<<<<<<.... GGTGGCGTGTCCGAGC..GGCcgA.AGGAGCACGCCTCGAAAGCGTGTGAGGT..GCAA....GCCTC.CGTGGGTTCAAATCCCAC..CGCCACCG... tRNA-Ser-CGA-1-1 Sc: 69.9 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>........<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGGCTCGCCTAGT..GGCcgA.TGGCGGCGGTCTTGAAAACCGCT.ATGGGGTGAC..ACCCAT..CGTGGGTTCGAATCCCAC..GCCCTCCG... tRNA-Ser-TGA-1-1 Sc: 68.5 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>..........<<<....>>>>>.......<<<<<..<<<<<<<.... GGAGGCTTCGCCTAGTCcGGTctA.TGGCGCCGCACTGCTAATGCGGTTTGGG..TTAAt...CCCCAtCCCGGGTTCAAATCCCGG..AGCCTCCG... tRNA-Ser-GCT-1-1 Sc: 62.7
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCTTTAGCTCAGTCGGCAGAGCGTCTCCATGGTAAGGAGAAG...........GtCTACGGTTCGATTCCGTAAAGGGGCT... tRNA-Thr-GGT-1-1 Sc: 69.8 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCTTAGCTCAGTCGGTAGAGCATCTCACTCGTAATGAGAAG...........GtCGTCGGTTCGATTCCGACAGGCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 89.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGCGTGGCGCAACTGGCAGCGCACCCGACTTGTAATCGGGCG...........GtTGGGGGTTCGAGTCCCCCCGTCGGCT... tRNA-Thr-TGT-1-1 Sc: 76.3
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGTGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAG...........GcTGCAGGTTCAAGTCCTGTCACCCCTG... tRNA-Trp-CCA-1-1 Sc: 79.5
Tyr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGCGGGTTGCCCGAGTGGCcaA.TGGGAGCGGACTGTAAATCCGTCGGCTTA.....GCCTaCGAAGGTTCGAATCCTTC.ACCCGCCA... tRNA-Tyr-GTA-1-1 Sc: 69.7
Val tRNAs
>>>>>>>.....>>>>.........<<<<.>>>>.>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GGGCGAT...TGGCTCAGTGGT.A.GAGCGCTAC.CTTGACACGGTAGAG...........GtCACTGGTTCGAACCCAGT.ATCGCCCA... tRNA-Val-GAC-1-1 Sc: 76.2 >>>>>>>.....>>>>.........<<<<.>>>>.>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GGGCGAT...TGGCTCAGTGGT.A.GAGCGCTTC.GTTCACACCGAAGAG...........GtCACTGGTTCGAACCCAGT.ATCGCCCACCA tRNA-Val-CAC-1-1 Sc: 82.4 >..>>.>......>>>.........<<<...>.>.>.......<<.<.................>>>>>.......<<<<<.<.<<..<.... GTCGCAGctg.AACACAGCGCAcA.GTGCGTGAGcACTCACGATCCCTGG...........GtTGTGGGTTCGAGCCCCAC.CCGCCCCACCA tRNA-Val-CAC-2-1 Sc: 21.8 >>>>>>>.....>>>>.........<<<<.>>>>.>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GGGCGCG...TAGCTCAGCGGG.A.GAGCTCTCG.CCTTACAAGCGAGCG...........GtCGCCGGTTCGATCCCGGC.CGCGCCCA... tRNA-Val-TAC-1-1 Sc: 76.3
SeC tRNAs
Sup tRNAs