Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAG...........GtCGTCGGTTCGATCCCGATTATCTCCACCA tRNA-Ala-GGC-1-1 Sc: 75.8 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTTATCTCCACCA tRNA-Ala-TGC-1-1 Sc: 81.2 GGGGATATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTTATCTCCACCA tRNA-Ala-TGC-1-2 Sc: 81.2 GGGGATATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTTATCTCCACCA tRNA-Ala-TGC-1-3 Sc: 81.2
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACCCGTAGCTCAGCTGGAtAGAGTACTCGGCTACGAACCGAGCG...........GtCAAAGGTTCGAATCCTTTCGGGTGCGCCA tRNA-Arg-ACG-1-1 Sc: 83.6 GCACCCGTAGCTCAGCTGGAtAGAGTACTCGGCTACGAACCGAGCG...........GtCAGAGGTTCGAATCCTCTCGGGTGCGCCA tRNA-Arg-ACG-2-1 Sc: 83.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGTTCGTAGCTCAGTTGGAtAGAGCGTTGGCCTCCGGAGCCAAAG...........GtCGCAAGTTCGAATCTTGTCGAGCGCGCCA tRNA-Arg-CCG-1-1 Sc: 82.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCTTAGCTCAGCTGGAtAGAGCAACGCCCTTCTAAGGCGTGG...........GtCAAAGGTTCGAATCCTTTAGGGCGTGCCA tRNA-Arg-TCT-1-1 Sc: 82.9
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCTCCTTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATAT...........GtCGCTGGTTCAAGTCCAGCAGGAGGAGCCA tRNA-Asn-GTT-1-1 Sc: 77.7 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.... TCCTCCTTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATAT...........GtCGCAGGTTCGAGTCCCGCAGGAGGAGCCA tRNA-Asn-GTT-2-1 Sc: 75.2
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGTGGTAGTTCAGCTGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCATTCCGCCA tRNA-Asp-GTC-1-1 Sc: 84.3 GGAGTGGTAGTTCAGCTGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCATTCCGCCA tRNA-Asp-GTC-1-2 Sc: 84.3 GGAGTGGTAGTTCAGCTGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCATTCCGCCA tRNA-Asp-GTC-1-3 Sc: 84.3
Cys tRNAs
>>>>>>>..>>>..........<<<..>>>>.......<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGTGTTAGCAAAGCGGTT.ATGCACTGGATTGCAAATCCATGT...........AGCTCGGTTCGACTCCGGGACACGCCTCCA tRNA-Cys-GCA-1-1 Sc: 58.4
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATCGCCAAGCGGTA.AGGCACTGGGTTTTGATCTCAGCA...........TtCCTAGGTTCGAATCCTAGTACCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 65.8 TGGGGTATCGCCAAGCGGTA.AGGCACTGGGTTTTGATCTCAGCA...........TtCCTAGGTTCGAATCCTAGTACCCCAGCCA tRNA-Gln-TTG-1-2 Sc: 65.8
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GTCCCCATCGTCTAGAGGCctA.GGACATCGCCCTTTCACGGCGGTA...........ACCGGGGTTCGAATCCCCGTGGGGACGCCA tRNA-Glu-TTC-1-1 Sc: 60.4 GTCCCCATCGTCTAGAGGCctA.GGACATCGCCCTTTCACGGCGGTA...........ACCGGGGTTCGAATCCCCGTGGGGACGCCA tRNA-Glu-TTC-1-2 Sc: 60.4 GTCCCCATCGTCTAGAGGCctA.GGACATCGCCCTTTCACGGCGGTA...........ACCGGGGTTCGAATCCCCGTGGGGACGCCA tRNA-Glu-TTC-1-3 Sc: 60.4
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGTTGGT.A.GAGCACAACCTTGCCAAGGTTGGG...........GtCGCGAGTTCGAGCCTCGTTTCCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 85.0 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGCCTCGTTTCCCGCTCCA tRNA-Gly-GCC-2-1 Sc: 84.9 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGCCTCGTTTCCCGCTCCA tRNA-Gly-GCC-2-2 Sc: 84.9 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGCCTCGTTTCCCGCTCCA tRNA-Gly-GCC-2-3 Sc: 84.9 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCATCGTATAAT.GGCtA.TTACCTTAGCCTTCCAAGCTAATG...........A.TGCGGGTTCGATTCCCGCTGCCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 69.3
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTT...........GtCGTGGGTTCGAATCCCATTAGCCACCCCA tRNA-His-GTG-1-1 Sc: 78.7
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GtCGGTGGTTCAAGTCCACTCAGACCCACCA tRNA-Ile-GAT-1-1 Sc: 82.5 GGGTCTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GtCGGTGGTTCAAGTCCACTCAGACCCACCA tRNA-Ile-GAT-1-2 Sc: 82.5 GGGTCTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GtCGGTGGTTCAAGTCCACTCAGACCCACCA tRNA-Ile-GAT-1-3 Sc: 82.5
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>.>..........<.<..>>>>>.......<<<<<.<<<<<<<.... GCTCTGGTGGTGGAATTGGTaGACACGCTATCTTGAGGGGGTAGTGGCC.TAAG.....GTCGTGCGAGTTCAAGTCTCGC.CCAGAGCACCA tRNA-Leu-GAG-1-1 Sc: 55.4 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..........<<<..>.>>>.......<<<.<.<<<<<<<.... GCGGGACTGGCGAAATTGGTaGACGCACCAGATTTAGGTTCTGGC.GCC.GAGA.....GGTGTGTGGGTTCAAGTCCCTC.GTCCCGCACCA tRNA-Leu-TAG-1-1 Sc: 62.1 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..........<<<..>>>>>.......<<<<<.<<<<<<<.... GCCTGGGTGGCGAAATTGGTaGACGCAGCGGATTCAAAATCCGCC.GTT.GAATa....AACGTGTCGGTTCGAGTCCGAC.CCTAGGCACCA tRNA-Leu-CAA-1-1 Sc: 71.5 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCCGAGTGGTGGAATCGGTaGACACAAGGGATTTAAAATCCCTC.GCCTTTCG....AGGCGTGCCAGTTCAAGTCTGGC.TTCGGGCACCA tRNA-Leu-TAA-1-1 Sc: 69.3 GCCCGAGTGGTGGAATCGGTaGACACAAGGGATTTAAAATCCCTC.GCCTTTCG....AGGCGTGCCAGTTCAAGTCTGGC.TTCGGGCACCA tRNA-Leu-TAA-1-2 Sc: 69.3
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTTGTTAGCTCAGTTGGTAGAGTAGCGGACTCTTAATCCGTCG...........GtCGAGAGTTCGAGCCTCTCACAACCCACCA tRNA-Lys-CTT-1-1 Sc: 82.7 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTG...........GtCGAAGGTTCGAATCCTTCACGACCCACCA tRNA-Lys-TTT-1-1 Sc: 93.1 GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTG...........GtCGAAGGTTCGAATCCTTCACGACCCACCA tRNA-Lys-TTT-1-2 Sc: 93.1 GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTG...........GtCGAAGGTTCAAATCCTTCACGACCCACCA tRNA-Lys-TTT-2-1 Sc: 91.3
Met/Ile2 tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.... GGCTACATAGCTCAGTT.GGTtAGAGCACAACACTCATAATGTTGGG...........GtCGCAAGTTCGAATCTCGCTGTAGCCACCA tRNA-Met-CAT-1-1 Sc: 82.1 .>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCTtGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GcCGTCGGTTCAAATCCGGCCCCCGCAACCA tRNA-fMet-CAT-1-1 Sc: 79.3 CGCGGGGTGGAGCAGCTtGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGTTGGTTCAAATCCAGCCCCCGCAACCA tRNA-fMet-CAT-2-1 Sc: 78.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CCCCCCTTAGCTCAGTC.GGTtAGAGCAGGCGACTCATAATCGCTTG...........GtCACTGGTTCAAGTCCGGTAGGGGGGACCA tRNA-Ile2-CAT-1-1 Sc: 74.6
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGT...........GtCGGTGGTTCGATTCCGCCTCGAGGCACCA tRNA-Phe-GAA-1-1 Sc: 77.6
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGG...........GtCGTAGGTTCAAATCCTATCTCGCCGACCA tRNA-Pro-TGG-1-1 Sc: 81.0 CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGG...........GtCGTAGGTTCAAATCCTATCTCGCCGACCA tRNA-Pro-TGG-1-2 Sc: 81.0
SeC tRNAs
>>>>>>>>>>>...........<<<<.>>>>>.......<<<<<..>>>>>>>....<<<<<<<..>>>>>.......<<<<<...<<<<<<<.... GGAGGGGCGTCATCTccGGTgAGGTGGCAGGATTTCAAATCCTGTTGAGGACGCCAGCGTTCTTGGGTGGGTTCAACTCCCAT..tCCCCTCCGCCA tRNA-SeC-TCA-1-1 Sc: 123.8
Ser tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>>>>........<<<<<<.>>>>>.......<<<<<..<<<<<<<.... GGTGAGATGTCCGAGT.GGTtgA.AGGAGCACGCCTGGAAAGCGTGTATGTGG.GAAA...CTGCATCAAGGGTTCAAATCCCTT..TCTCACCGCCA tRNA-Ser-GGA-1-1 Sc: 77.4 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>>>>........<<<<<<.>>>>>.......<<<<<..<<<<<<<.... GGAGGAATGGTCGAGT.GGTtgA.AGGCACCGGTCTTGAAAACCGGCGAGGGT.TTAC...GCCCTCCTAGGGTTCGAATCCCTA..TTCCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 79.3 GGAGGAATGGTCGAGT.GGTtgA.AGGCACCGGTCTTGAAAACCGGCGAGGGT.TTAC...GCCCTCCTAGGGTTCGAATCCCTA..TTCCTCCGCCA tRNA-Ser-TGA-1-2 Sc: 79.3 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>>>>>>>......<<<<<<<.>>>>>.......<<<<<..<<<<<<<.... GGTGAGATGGCCGAGCAGGCtgA.AGGCGCTCCCCTGCTAAGGGAGTATGGGGTTAAAaaGCTCCATCGAGGGTTCGAATCCCTC..TCTCACCGCCA tRNA-Ser-GCT-1-1 Sc: 85.0
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAG...........GtCGGCGGTTCAAATCCGCCTATCAGCACCA tRNA-Thr-GGT-1-1 Sc: 85.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAG...........GtCATCAGTTCGATTCCGATAGTCGGCACCA tRNA-Thr-TGT-1-1 Sc: 79.8
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGT...........GtTGGGAGTTCGAGCCTCTCCGCCCCTGCCA tRNA-Trp-CCA-1-1 Sc: 76.4
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGAGGGGTTCCCGAGCGGCcaA.AGGGGGCAGACTGTAAATCTGTTGGCTCA.....GCCTtCGAAGGTTCGAATCCTTC.TCCCTCCACCA tRNA-Tyr-GTA-1-1 Sc: 76.4
Val tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.................>>>>.......<<<<.<<<<<<<.... GCGACTATAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGG...........GtCACTGGTTCGAGTCCAGCTAGTCGCACCA tRNA-Val-GAC-1-1 Sc: 77.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGATTAGCTCAGTTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCACTGGTTCGAGACCGGTATCGCCCACCA tRNA-Val-TAC-1-1 Sc: 81.1 GGGCGATTAGCTCAGTTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCACTGGTTCGAGACCGGTATCGCCCACCA tRNA-Val-TAC-1-2 Sc: 81.1 GGGCGATTAGCTCAGTTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCACTGGTTCGAGACCGGTATCGCCCACCA tRNA-Val-TAC-1-3 Sc: 81.1 GGGCGATTAGCTCAGTTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCACTGGTTCGAGACCGGTATCGCCCACCA tRNA-Val-TAC-1-4 Sc: 81.1