Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTGGCGCAGCTGGGA.GCGCGTCTGAATGGCATTCAGAAG...........GtCAGGGGTTCGAATCCCCTCAGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 80.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCGCAGCTGGGA.GCGCGTCGCAATCGCACTGCGAAG...........GtCAGGGGTTCGAATCCCCTCAGCTCCACCA tRNA-Ala-CGC-1-1 Sc: 81.5 >>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCTCAGC.GGGA.GAGCAGGTCCTTTGCAAGGACAAG...........GtCGGGGGTTCAAATCCCTCCAGCTCCACCA tRNA-Ala-TGC-1-1 Sc: 79.5
Arg tRNAs
>>>>>>>..>>>>................<<<<...>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCT...GGAtA....GAGCG..ACTGACTACGGATCAGTAG...........GcCAGGGGTTCGAATCCTCTCGGGCCCGCCA tRNA-Arg-ACG-1-1 Sc: 84.9 >>>>>>>..>>>>................<<<<...>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCAGCC...GGAtA....GAGCG..TTGGCCTCCGGAGCCAAAG...........GtCAGAGGTTCGAGTCCTCTCGGGCGCGCCA tRNA-Arg-CCG-1-1 Sc: 83.8 >>>>>>>..>>>>................<<<<...>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCTCGTAGCTCAGCT...GGAtA....GAGCG..AAGGTTTCCTAAACCTTAG...........GtCGCAGGTTCGAGTCCTGCCGGGCGCACCA tRNA-Arg-CCT-1-1 Sc: 85.0 >>>>>>>..>>>>................<<<<...>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAGT....GGAtA....GAGCA..GCGGCCTTCTAAGCCGTAG...........GtCGGGCGTTCGAATCGCTCCAGGCCCGCCA tRNA-Arg-TCT-1-1 Sc: 85.1 >>>>.>...>.>>................<<.<...>>>>>.......<<<<<................>>>>>.......<<<<<.<.<<<<.... GGGCATTTGG.GCAGATaat.........GCACGgaGCGGCCTTCTAAGCCGTAG...........GtCGGGCGTTCGAATCGCTCCAGGCCCGCCA tRNA-Arg-TCT-2-1 Sc: 35.3
Asn tRNAs
>>>>>>>..>>>>.................<<<<.>>>>>........<<<<<...........................>>>>>.......<<<<<.<<<<<<<.... TCCGCGGTAGCTC.....AGTCGGT..A..GAGCGTCCGACT.GTTAATCGGATG......................GtCGCAGGTTCGAGTCCTGC.CCGCGGAGCCA tRNA-Asn-GTT-1-1 Sc: 90.1 .>>......>>>>.................<<<<.>>>............<<<..>>>>>............<<<<<...>>>>>.......<<<<<.....<<..... AGCAC...AGCGCttttt.GT.GGGtcA..GTGTGTGGCGTTgTTTAAGCCCGAAGTCACCTCATAa...TCGTGGTGtCGGCGGTTCAAGTCCGCC.CATAGCCACCA tRNA-Asn-GTT-2-1 Sc: 22.1
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCGGTGGTGTAGTTGGTtAACATACCCGCCTGTCACGTGGGAG...........AtCGCGGGTTCAAGTCCCGTCCGGGCCGCCA tRNA-Asp-GTC-1-1 Sc: 77.7
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGCTGTAGCCAAGTGGTA.AGGCAGAGGTCTGCAAAACCTCCA...........CtCGCCGGTTCGAATCCGGCCAGCGCCTCCA tRNA-Cys-GCA-1-1 Sc: 81.8
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCCATCGTCTAGTGGCctA.GGACACCGCCCTCTCACGGCGGCG...........ACAGGGGTTCGAATCCCCTTGGGGTCACCA tRNA-Glu-CTC-1-1 Sc: 73.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCCATCGACTAGCGGTt.A.GGTCACCGCCCTTTCAAGGCGGCG...........GCAGGGGTTCGAATCCCCTTGGGGTCACCA tRNA-Glu-TTC-1-1 Sc: 76.3
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... TGGGGCGTCGTCTAACGGCA.GGACTGCGGATTCTGGCTCCGCCA...........ATCGTGGTTCGAATCCACGCGCCCCAGCCA tRNA-Gln-CTG-1-1 Sc: 56.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... TGGGGCATCGTCTAATGGCA.GGACAACGGTCTTTGGAACCGTCG...........GTCGTGGTTCGAATCCACGTGCCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 65.8
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAGTAGCTCAGTTGGTAGAGCACAACCTTGCCAAGGTTGGG...........GtCGCGGGTTCGAGTCCCGTCTCCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 92.5 GCGGGAGTAGCTCAGTTGGTAGAGCACAACCTTGCCAAGGTTGGG...........GtCGCGGGTTCGAGTCCCGTCTCCCGCTCCA tRNA-Gly-GCC-1-2 Sc: 92.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGTTGGTAGAGCATCTGCTTCCCAAGCAGAGG...........GtCGTGGGTTCGAGTCCCATTTCCCGCTCCA tRNA-Gly-CCC-1-1 Sc: 92.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAGTAGCTCAGTTGGTAGAGCATTAGCCTTCCAAGCTAAGG...........GtCGCGGGTTCGAGTCCCGTCTCCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 94.9
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGAGTGTAGCTCAGCCGGTtAGAGCACTGGTCTGTGGAACCAGGG...........GtCGTGGGTTCAAGTCCCATCACTCACCCCA tRNA-His-GTG-1-1 Sc: 78.7
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGGTTAGCTCAGCTGGTtAGAGCACACGCCTGATAAGCGTGAG...........GtCCCCGGTTCGAGTCCGGGATCGCCCACCA tRNA-Ile-GAT-1-1 Sc: 84.3
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGTTAGCTCAGCTGGTcAGAGCGGGGGACTCATAATCTCTTG...........GtCGCAGGTTCAAGTCCTGCACGGCCCACCA tRNA-Ile2-CAT-1-1 Sc: 82.6
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGTGGAACTGGTaG.ACACGCTATCTTGAGGGGGTAGT.GCCC..GCTA......GGGCGTAGGGGTTCAAGTCCCCT.CCCCGGCACCA tRNA-Leu-GAG-1-1 Sc: 64.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.>........<.<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGATGGCGGAATTGGTaG.ACGCGCACGATTCAGGGTCGTGT.GCCCGC........GAGGGTGTGCAGGTTCAAGTCCTGT.TCCCGGCACCA tRNA-Leu-CAG-1-1 Sc: 68.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>..............<<<..>>>>>.......<<<<<.<<<<<<<.... GCGAGGATGGTGGAATTGGTaG.ACACGCCAGACTTAGGATCTGGT.GCC...GCAA.......GGCGTGGGGGTTCAAGTCCCCC.TCCTCGCACCA tRNA-Leu-TAG-1-1 Sc: 78.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>.>.>..........<.<.<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGATGGCGGAATCGGTaG.ACGCACTCGACTCAAAATCGAGCGGTTAG..........CAGCCATGGGGGTTCGAGTCCCCC.TCCCGGCACCA tRNA-Leu-CAA-1-1 Sc: 73.5 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGCGGAAT.GGTaG.ACGCTACGGACTTAAAATCCGTT.GGGG..GAAA......CCCCGTGTGGGTTCGAGTCCCAT.CCCCGGCACCA tRNA-Leu-TAA-1-1 Sc: 83.7
Lys tRNAs
>>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGCCCCTTAGCTCAATCGGTAGAGCTCCCGACTCTTAATCGGTAG...........GtTGTAGGTTCGAGTCCTACAGGGGCCACCA tRNA-Lys-CTT-1-1 Sc: 80.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCTTAGCTCAGTTGGTAGAGCAACCGACTTTTAATCGGTTG...........GtCACAGGTTCAAGTCCTGTAGGGCCCACCA tRNA-Lys-TTT-1-1 Sc: 91.3
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTATGTAGCTCAGCTGGTtAGAGCACACGACTCATAATCGTGGT...........GtCGGCGGTTCAAGTCCGCCCATAGCCACCA tRNA-Met-CAT-1-1 Sc: 82.7
fMet tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTCtGGTAGCTCGTCGGGCTCATAACCCGAAG...........GtCGAAGGTTCAAATCCTTCCCCCGCAACCA tRNA-fMet-CAT-1-1 Sc: 81.3 CGCGGGGTGGAGCAGTCtGGTAGCTCGTCGGGCTCATAACCCGAAG...........GtCGAAGGTTCAAATCCTTCCCCCGCAACCA tRNA-fMet-CAT-1-2 Sc: 81.3
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAAGGTAGCTCAGTCGGTAGAGCATGCGACTGAAAATCGCAGT...........GtCGGCGGTTCGATTCCGCCCCTTGGCACCA tRNA-Phe-GAA-1-1 Sc: 83.4
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGAGTAGCGCAGCCtGGTAGCGCACACGCTTGGGGTGCGTGTG...........GtCGTGGGTTCAAATCCCGCCTCCCCGACCA tRNA-Pro-GGG-1-1 Sc: 76.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGAGGAGTAGCGCAGCCtGGTAGCGCACCTGGTTCGGGTCCAGGGG...........GtCGGAGGTTCGAATCCTCTCTCCTCGACCA tRNA-Pro-CGG-1-1 Sc: 79.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGAGTAGCGCAGCCtGGTAGCGCATCTGCTTTGGGAGCAGAGG...........GtCGGAGGTTCGAATCCTCTCTCCCCGACCA tRNA-Pro-TGG-1-1 Sc: 83.3
Ser tRNAs
>>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>>>>>........<<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGCCCGAGTGGTtgA....AGGGGCACGCCTGGAGAGCGTGT.ATAGGGCGTTC....GCTCTAT..CGAGGGTTCGAATCCCTC..CCTCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 90.0 >>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>>>>..........<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGGGTGCCAGAGCGGTtgA....ATGGGCCGGTCTCGAAAACCGGTATATCCC.TTAC.....GGGGTAT.CGCGGGTTCGAATCCCGC..CCCCTCCGCCA tRNA-Ser-CGA-1-1 Sc: 89.9 >>>>...........................>>>>>.......<<<<<...........................>>>>>.......<<<<<.....<<<<.... GGGCAGATAA......TGC..A....CGG.AGCGGCCTTCTAAGCCGTAG......................GtCGGGCGTTCGAATCGCTC..CAGGCCCGCCA tRNA-Ser-CGA-2-1 Sc: 34.5 >>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>>>>..........<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGGATGGCCGAGCGGTtgA....AGGCGACGGTCTTGAAAACCGTT.ATGGGC.TTAC.....GCCCAT..CGGGGGTTCGAATCCCTC..TCCCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 89.1 >>>>>>>..>>>...............<<<.>>>>>.......<<<<<..>>>>>>..........<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCCGAGTGGCtgA....AGGCGGCGGTTTGCTAAACCGTTATAGGGGATTAAa...GCCCCTAT.CGGGGGTTCGAATCCCCC..CCTCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 89.9
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTCGAGTAGCTCAGCTGGTA.GAGCACACCCTTGGTAAGGGTGAG...........GtCGCCGGTTCAATCCCGGCCTCGAGCTCCA tRNA-Thr-GGT-1-1 Sc: 81.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGAAGTAGCTCAGC.GGTA.GAGCACTCGATTCGTAATCGAGCG...........GtCGTGGGTTCAAATCCCACCTTCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 89.3 >>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCACCCTAGCTCAACTGGTA.GAGCACCCGACTTGTAATCGGAAG...........GtTGTCGGTTCGATTCCGATGGGTGGCTCCA tRNA-Thr-TGT-1-1 Sc: 79.1
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGTTAGCTCAGCCcGGTAGAGCACTCGTCTCCAAAACGAGGT...........GtCGGAGGTTCGAATCCTTCACGGCCCGCCA tRNA-Trp-CCA-1-1 Sc: 84.7
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGGCAGGTGCCCGAGCGGCcaA.AGGGGACGGTCTGTAAAACCGTTGGCGGAA....GCCTtCGATGGTTCGAATCCATC.CCTGCCCACCA tRNA-Tyr-GTA-1-1 Sc: 79.5
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCGTAGCTCAGCTGGCtA.GAGCACTACCTTGACACGGTAGGG...........GtCGTTGGTTCGAGTCCAATCGCGCCCACCA tRNA-Val-GAC-1-1 Sc: 85.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGATTAGCTCAGC.GGG.A.GAGCACACGCTTCACACGCGTGGG...........GtCGTAGGTTCAAATCCTACATCGCCCACCA tRNA-Val-CAC-1-1 Sc: 83.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCTTAGCTCAGCTGGA.A.GAGCACATCCCTTACAAGGATGGG...........GtCGGCGGTTCGAGCCCGTCAGCGCCCACCA tRNA-Val-TAC-1-1 Sc: 82.2
SeC tRNAs
Sup tRNAs