Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATGGCGCAGCTGGTAGCGCACCACACTGGCAGTGTGGGG...........GtCAGGGGTTCGAGTCCCCTTAGCTCCA... tRNA-Ala-GGC-1-1 Sc: 74.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATGGCGCAGTTGGTAGCGCGACTCGTTCGCATCGAGTAG...........GtCAGGGGTTCGAATCCCCTTAGCTCCA... tRNA-Ala-CGC-1-1 Sc: 76.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCTTAGCTCAGTTGGTAGAGCACCGCCTTTGCAAGGCGGGT...........GtCAGGGGTTCGATTCCCCTAGGCTCCA... tRNA-Ala-TGC-1-1 Sc: 81.6
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCAAC.GGAtA.GAGCATCTGACTACGGATCAGAAG...........GtTAGGGGTTCGAATCCCTTCGGGCGCA... tRNA-Arg-ACG-1-1 Sc: 76.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCGTAGCTCAGG.GGAtA.GAGCGTCTGCCTCCGGAGCAGAAG...........GcCGCAGGTTCGAATCCTGCCGGGGGCACCA tRNA-Arg-CCG-1-1 Sc: 87.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCTCGTAGCTCAGG.GGAtA.GAGCACGGCTCTCCTAAAGCCGGT...........GtCGCAGGTTCGAATCCTGCCGGGGGCA... tRNA-Arg-CCT-1-1 Sc: 72.2 >>>>>>>..>>>>..........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCCGTAGCTCAGGTGGAtA.GAGCAAGGGCCTTCTAATCCCTAG...........GtCGCACGTTCGAGTCGTGCCGGGGGCA... tRNA-Arg-TCT-1-1 Sc: 61.9
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCCCTGTAGCTCAATTGGCAGAGCATTCGGCTGTTAACCGAAGG...........GtTCCTGGTTCGAGTCCAGGCGGGGGAG... tRNA-Asn-GTT-1-1 Sc: 70.4
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCTGTGGCGCAGTTtGGTtAGCGCGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCGAGTCCCGTCAGGGTCGCCA tRNA-Asp-GTC-1-1 Sc: 86.5
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTGGAGTGGCCGAGTGGTG.AGGCAACGGCCTGCAAAGCCGTGC...........ACACGGGTTCGATTCCCGTCTCCACCTCCA tRNA-Cys-GCA-1-1 Sc: 79.3
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TGGGGTATGGTGTAATTGGCAACACAGCTGATTCTGGTTCAGCC............GtTCTAGGTTCGAGTCCTGG.TACCCCAG... tRNA-Gln-CTG-1-1 Sc: 54.7 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TCCGTCGTGGTGTAATCGGCAGCACATCAGATTTTGGTTCTGAGA...........G.TTCAGGTTCGAGTCCTGG.CGACGGAG... tRNA-Gln-TTG-1-1 Sc: 51.9
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCCGTCGTCTAGCGGCctA.GGACGCCGCCCTCTCACGGCGGTA...........GCGTGGGTTCGAATCCCATCGGGGCTA... tRNA-Glu-CTC-1-1 Sc: 67.2 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCCCCTTCGTCTAGCGGCctA.GGACGCCGCCCTTTCAAGGCGGTA...........GCGCGGGTTCGAATCCCGTAGGGGGTA... tRNA-Glu-TTC-1-1 Sc: 69.4
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGATGTAGCGCAGTTGGTA.GCGCATCACCTTGCCAAGGTGAGG...........GtCGCGGGTTCGAATCCCGTCATCCGCT... tRNA-Gly-GCC-1-1 Sc: 85.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGATGTAGTTCAAT.GGCA.GAACATCAGCTTCCCAAGCTGAGA...........A.CGCGGGTTCGATTCCCGTCATCGGCTCCA tRNA-Gly-CCC-1-1 Sc: 83.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGCTCAAT.GGTA.GAGCCCTAGTCTTCCAAACTAGCT...........A.CGCGGGTTCGATTCCCGTCGCCCGCT... tRNA-Gly-TCC-1-1 Sc: 77.4
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGCTGTAGTTCAGCTGGTAGAGCACCAGGTTGTGATCCTGGGT...........GtCGCGGGTTCGAGTCCCGTCAGCCACCCCA tRNA-His-GTG-1-1 Sc: 75.8
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAGGCGGTtAGAGCGCTTCGCTGATAACGAAGAG...........GtCGGAGGTTCGAGTCCTCCTAGGCCCACCA tRNA-Ile-GAT-1-1 Sc: 86.6
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>>>.........<<<<....>>>>>.......<<<<<.<<<<<<<.... GTCCGAGTGGCGGAAT.GGCaG.ACGCGCTAGCTTGAGGTGCTAGTGCCCTACTAA.....TGGGCG.TGGGGGTTCAAGTCCCCC.CTCGGACA... tRNA-Leu-GAG-1-1 Sc: 57.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GGGCGAGTGGCGGAAT.GGCaG.ACGCGCTGGCTTCAGGTGCCAGT.GTCC.TTCG......GGACG.TGGGGGTTCAAGTCCCCC.TTCGCCCA... tRNA-Leu-CAG-1-1 Sc: 66.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGCGTGGCGAAATTGGCaG.ACGCGATGGTTTTAGGTGCCATTGCTC..GAAA.......GAGCtTGAGGGTTCGAGTCCCTC.CGCCCGCA... tRNA-Leu-TAG-1-1 Sc: 62.4 >>>>>>>..>>>............<<<.>>>>.........<<<<........................>>>>>.......<<<<<.<<<<<<<.... GCCCTCGTATCCCAACTGGCaG.AGGAAACGGATTCAAAACCCGTAC...................AgTGTGAGTTCGAATCTCAC.CGAGGGCACCA tRNA-Leu-CAA-1-1 Sc: 62.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<........................>>>>>.......<<<<<.<<<<<<<.... GCCCCCATAGCCCAATTGGCaG.AGGCAGCGGACTTAAAATCCGCCC...................AgTGTCGGTTCGAGTCCGAC.TGGGGGCA... tRNA-Leu-TAA-1-1 Sc: 66.2
Lys tRNAs
>>>>>>>.............>>>>...................<<<<............>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCGTTA...........GCTCAGTT.G..........GTAGAGCA...........GCTGACTCTTAATCAGCGG...........GtCCGGGGTTCGAAACCCTGACGGCGCACCA tRNA-Lys-CTT-1-1 Sc: 84.7 >>>>>>>.............>>>>...................<<<<.............>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCCCTATA...........GCTCAGTT.G..........GTAGAGCT...........ACGGACTTTTAATCCGCAG...........GtCCCAGGTTCGAGCCCTGGTGGGGGCA... tRNA-Lys-TTT-1-1 Sc: 70.5 >>>>>>>.............>.>.....................<.<.............>.>>.......<<.<.................>>>>>.......<<<<<<<<<<<<.... GCCTCCGGAtcgatcccattGTGGCGTCcGtcacttttccGTAACTCAcgccgcatgatCCAGACTTTTAATCCGCAG...........GtCCTAGGTTCGAGTCCTAGTGGGGGCACCA tRNA-Lys-TTT-2-1 Sc: 24.8
Met/Ile2 tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGATGTAGCTCAGTC.GGTtAGAGCGAACGACTCATAATCGTTAG...........GtCGCCGGTTCGAGTCCGGCCATCGCTA... tRNA-Met-CAT-1-1 Sc: 78.4 .>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCTcGGT.AGCTCGCTGGGCTCATAACCCAGAG...........GtCGCAGGTTCGAATCCTGTCCCCGCTA... tRNA-fMet-CAT-1-1 Sc: 76.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCGGTAGCTCAGTT.GGTtAGAGCCGCGGACTCATAATCCGTTG...........GtCGCGGGTTCGAGCCCCGCCCGCCCCA... tRNA-Ile2-CAT-1-1 Sc: 86.5
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCAGGTAGCTCAGTCGGTaCGAGCGTCCGCCTGAAAAGCGGAAG...........GtCGGCGGTTCGATCCCGCCCCTGGCCA... tRNA-Phe-GAA-1-1 Sc: 77.0
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGCTGTGGCGCAGTTtGGTAGCGCACTTGACTGGGGGTCAAGTG...........GtCGCAGGTTCAAATCCTGTCAGCCCGACCA tRNA-Pro-GGG-1-1 Sc: 79.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGCTtGGTAGCGCGCTTCGTTCGGGACGAAGAG...........GcCGTGGGTTCAAATCCCGCCACCCCGA... tRNA-Pro-CGG-1-1 Sc: 73.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTAGCGCAGCTtGGTAGCGCATCCGCTTTGGGAGCGGAAG...........GcCGCAGGTTCAAATCCTGTCACCCCGACCA tRNA-Pro-TGG-1-1 Sc: 84.2
SeC tRNAs
>>>>>>>...>>>...........<<<.>>>>>.......<<<<<..>.>>>>>.....<<<<<.<.>>>>>.......<<<<<....<<<<<<<.... GGAGGCGtgtCCGGTCtGGTgA.CCGGCGCGGTCTTCAAAACCGTGGAACGGCAGACGcTGCCGCTGGCGGGTTCGATTCCCGT...cCGCCTCCGCCA tRNA-SeC-TCA-1-1 Sc: 112.3
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>.>..........<.<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGATTCGCCTAGTGGCctA.TGGCGCTCGCCTGGAACGCGGGTTGGGT...TAAT...AGCCCtCGCGGGTTCAAATCCCGC..ATCCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 70.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>........<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGTGGCGTGTCCGAGCGGCctA.AGGAGCACGCCTCGAAAGCGTGT.GACGGC.TAAC.ACCGTC..CGAGGGTTCAAATCCCTC..CGCCACCGCCA tRNA-Ser-CGA-1-1 Sc: 73.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>........<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGTGGCGTGGCAGAGCGGCctA.ATGCACTCGCCTTGAAAGCGAGA.GACGGC.TAAC.ACCGTC..CGGGGGTTCAAATCCCTC..CGCCACCG... tRNA-Ser-TGA-1-1 Sc: 70.6 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGCGTGCCAGAGCGGCcgA.ATGGGGCTCACTGCTAATGAGTT.GTCCCCCTTCAAGGGGAC..CGGAGGTTCAAATCCTCT..CGCCTCCG... tRNA-Ser-GCT-1-1 Sc: 71.4
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCTTAGCTCAGTCGGTA.GAGCGTTTCCATGGTAAGGAAAAG...........GtCAACGGTTCGATTCCGTTAGGGGGCT... tRNA-Thr-GGT-1-1 Sc: 73.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCACCTTAGCTCAGTCGGTA.GAGCGGCTCACTCGTAATGAGCAG...........GtCAGGAGTTCGATTCTCCTAGGTGGCT... tRNA-Thr-CGT-1-1 Sc: 76.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCCTTAGCTCAGT.GGTA.GAGCACTCGCCTTGTAAGCGAGCG...........GtCGTCAGTTCAATCCTGACAGGGGGCTCCA tRNA-Thr-TGT-1-1 Sc: 77.2
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAG...........GtTGCAGGTTCAAGTCCTGTCGCCCCTG... tRNA-Trp-CCA-1-1 Sc: 78.9
Tyr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.>>.........<<...>>>>>.......<<<<<.<<<<<<<.... GGCAGGTTGCCCGAGCGGCcaA.TGGGAGCGGACTGTAAATCCGTCGCGAAA.....GCTtCACAGGTTCGAATCCTGT.ACCTGCCACCA tRNA-Tyr-GTA-1-1 Sc: 71.1
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCGATTAGCTCAGCGGGA.GAGCGCTTCCCTGACACGGAAGAG...........GtCACTGGTTCAATCCCAGTATCGCGCACCA tRNA-Val-GAC-1-1 Sc: 78.7 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCCGTGGCTCAGTGGGA.GAGCGTCCGCTTCACACGCGGAAG...........GtCGCTGGTTCGATCCCAGCCGGGACCA... tRNA-Val-CAC-1-1 Sc: 74.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCGTAGCTCAGTGGTA.GAGCTCTGGTTTTACACACCAGCG...........GtCGGCGGTTCGATACCGTCCGCGCCCA... tRNA-Val-TAC-1-1 Sc: 71.4