Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATGGCGCAGCTGGTAGCGCACCACACTGGCAGTGTGGGG...........GtCAGGGGTTCGAGTCCCCTTAGCTCCA... tRNA-Ala-GGC-1-1 Sc: 74.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATGGCGCAGTTGGTAGCGCGACTCGTTCGCATCGAGTAG...........GtCAGGGGTTCGAATCCCCTTAGCTCCACCA tRNA-Ala-CGC-1-1 Sc: 82.9 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCTTAGCTCAGTTGGTAGAGCACTGCCTTTGCAAGGCAGGG...........GtCAGGGGTTCGAGTCCCCTAGGCTCCA... tRNA-Ala-TGC-1-1 Sc: 83.7
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCAAC.GGAtA.GAGCATCTGACTACGGATCAGAAG...........GtTGGGAGTTCGAATCTCTTCGGGCGCG... tRNA-Arg-ACG-1-1 Sc: 74.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCGTAGCTCAGG.GGAtA.GAGCGTCTGCCTCCGGAGCAGAAG...........GcCGCAGGTTCGAATCCTGCCGGGGGCA... tRNA-Arg-CCG-1-1 Sc: 80.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCTCGTAGCTCAGG.GGAtA.GAGCACGGCTCTCCTAAAGCCGGT...........GtCGCAGGTTCGAATCCTGCCGGGGGCA... tRNA-Arg-CCT-1-1 Sc: 72.2 >>>>>>>..>>>>..........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCCGTAGCTCAGGTGGAtA.GAGCAAGGGCCTTCTAATCCCTAG...........GtCGCACGTTCGAGTCGTGCCGGGGGCA... tRNA-Arg-TCT-1-1 Sc: 61.9
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCCCTGTAGCTCAATTGGCAGAGCGTTCGGCTGTTAACCGAAGG...........GtTGGAGGTTCGAGTCCTCCCGGGGGAG... tRNA-Asn-GTT-1-1 Sc: 73.8
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCTGTGGCGCAGTTGGTtAGCGCGCCGCCCTGTCACGGCGGAG...........GtCGCGGGTTCGAGTCCCGTCAGGGTCGCCA tRNA-Asp-GTC-1-1 Sc: 88.9
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTGGAGTGGCCGAGTGGTG.AGGCAACGGCCTGCAAAGCCGTGC...........ACACGGGTTCGATTCCCGTCTCCACCTCCA tRNA-Cys-GCA-1-1 Sc: 79.3
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TGGGGTATGGTGTAATTGGCAACACAGCTGATTCTGGTTCAGCC............AtTCTAGGTTCGAGTCCTGG.TACCCCAG... tRNA-Gln-CTG-1-1 Sc: 52.9 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TCCGTCGTGGTGTAATCGGCAGCACCTCTGATTTTGGTTCAGATA...........G.TTCAGGTTCGAGTCCTGG.CGACGGAG... tRNA-Gln-TTG-1-1 Sc: 50.1
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCCGTCGTCTAGC.GGCctA.GGACGCCGCCCTCTCACGGCGGTA...........GCGTGGGTTCGAATCCCATCGGGGCTA... tRNA-Glu-CTC-1-1 Sc: 67.2 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCCCCTTCGTCTAGACGGCctA.GGACGCCGCCCTTTCAAGGCGGTA...........ACGCGGGTTCGAATCCCGTAGGGGGTA... tRNA-Glu-TTC-1-1 Sc: 65.3
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGATGTAGCGCAGTTGGTA.GCGCATCACCTTGCCAAGGTGAGG...........GtCGCGGGTTCGAATCCCGTCATCCGCT... tRNA-Gly-GCC-1-1 Sc: 85.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGATGTAGTTCAAT.GGCA.GAACATCAGCTTCCCAAGCTGAAT...........A.CGCGGGTTCGATTCCCGTCATCGGCT... tRNA-Gly-CCC-1-1 Sc: 76.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGCTCAAT.GGTA.GAGCCCTAGTCTTCCAAACTAGCG...........A.CGCGGGTTCGATTCCCGTCGCCCGCT... tRNA-Gly-TCC-1-1 Sc: 80.1
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGAGTGTAGTTCAGTTGGTAGAGCACCAGGTTGTGATCCTGGGT...........GtCGCGGGTTCGAGTCCCGTCACTCACCCCA tRNA-His-GTG-1-1 Sc: 74.6
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAGGCGGTtAGAGCGCTTCGCTGATAACGAAGAG...........GtCGGAGGTTCGAGTCCTCCTAGGCCCA... tRNA-Ile-GAT-1-1 Sc: 79.7
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>>>.........<<<<....>>>>>.......<<<<<.<<<<<<<.... GTCCGAGTGGCGGAAT.GGCaG.ACGCGCTAGCTTGAGGTGCTAGTGCCCTACTAA.....TGGGCG.TGGGGGTTCAAGTCCCCC.CTCGGACA... tRNA-Leu-GAG-1-1 Sc: 57.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GGGCGAGTGGCGGAAT.GGCaG.ACGCGCTGGCTTCAGGTGCCAGT.GTCC.TTCG......GGACG.TGGGGGTTCAAGTCCCCC.TTCGCCCA... tRNA-Leu-CAG-1-1 Sc: 66.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGCGTGATGAAATTGGCaA.ACATGCCGGTTTTAGGTGCCGGTGCTC..GAAA.......GAGTtTGAGGGTTCGAGTCCCTC.CGCCCGCA... tRNA-Leu-TAG-1-1 Sc: 64.4 >>>>>>>..>>>............<<<.>>>>.........<<<<........................>>>>>.......<<<<<.<<<<<<<.... GCCCTCGTATCCCAACTGGCaG.AGGAAACGGACTCAAAACCCGTCC...................AgTGTGGGTTCGAATCCCAC.CGAGGGCACCA tRNA-Leu-CAA-1-1 Sc: 64.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<........................>>>>>.......<<<<<.<<<<<<<.... GCCCCCATAGCCCAATTGGCaG.AGGCAGCGGACTTAAAATCCGTCA...................AgTGTCGGTTCGAGTCCGAC.TGGGGGCA... tRNA-Leu-TAA-1-1 Sc: 70.5
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCGTTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGG...........GtCCGGGGTTCGAAACCCTGACGGCGCA... tRNA-Lys-CTT-1-1 Sc: 77.8 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCCCTATAGCTCAGTTGGTAGAGCTACGGACTTTTAATCCGCAG...........GtCCCAGGTTCGAGTCCTGGTGGGGGCA... tRNA-Lys-TTT-1-1 Sc: 74.0
Met/Ile2 tRNAs
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCTcGGT.AGCTCGCTGGGCTCATAACCCAGAG...........GtCGCAGGTTCGAATCCTGTCCCCGCTACCA tRNA-fMet-CAT-1-1 Sc: 83.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGATGTAGCTCAGTC.GGTtAGAGCGAACGACTCATAATCGTTAG...........GtCGCCGGTTCGAGTCCGGCCATCGCTA... tRNA-Met-CAT-1-1 Sc: 78.4 GGGGCGGTAGCTCAGTT.GGTtAGAGCCGCGGACTCATAATCCGTTG...........GtCGCGGGTTCGAGCCCCGCCCGCCCCA... tRNA-Ile2-CAT-1-1 Sc: 86.5
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCAGGTAGCTCAGTCGGTaTGAGCGTCCGCCTGAAAAGCGGAAG...........GtCGGCGGTTCGATCCCGCCCCTGGCCACCA tRNA-Phe-GAA-1-1 Sc: 83.5
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGCTGTGGCGCAGTTtGGTAGCGCACTTGACTGGGGGTCAAGTG...........GtCGCAGGTTCAAATCCTGTCAGCCCGA... tRNA-Pro-GGG-1-1 Sc: 73.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGCTtGGTAGCGCGCTTCGTTCGGGACGAAGAG...........GcCGTGGGTTCAAATCCCGCCACCCCGA... tRNA-Pro-CGG-1-1 Sc: 73.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTAGCGCAGCTtGGTAGCGCATCCGCTTTGGGAGCGGAAG...........GcCGCAGGTTCAAATCCTGTCACCCCGACCA tRNA-Pro-TGG-1-1 Sc: 84.2
SeC tRNAs
Ser tRNAs
>>>>>>>.............................>>>....................<<<.>>>>...>.......<<<<<..>>.>.............<.<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGATTC...........................GCCTAGT.GGCctA........TGGCGCTCG...CCTGGAACGCGGGTTGGGT...TAAC......AGCCCtCGCGGGTTCAAATCCCGC..ATCCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 70.1 >>>>>>>.............................>>>....................<<<.>>>>...>.......<<<<<..>>>>>...........<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGTGGCGTG...........................TCCGAGC.GGCctA........AGGAGCACG...CCTCGAAAGCGTGT.GACGGC.TAAC....ACCGTC..CGAGGGTTCAAATCCCTC..CGCCACCGCCA tRNA-Ser-CGA-1-1 Sc: 73.4 >>>>>................................>>>..................<<<..>>>>...>.......<<<<<..........................>>>>>.......<<<<<....<<<<<.... GGCGGAATAgaggctgatctggacgtatgagaccgaCCGC.GATGGG..A.gagatt.GCG.ACTGGttaGCTCATAACCCAGAG.....................GtCGCAGGTTCGAATCCTGT..CCCCGCTA... tRNA-Ser-CGA-2-1 Sc: 24.0 >>>>>>>.............................>>>....................<<<.>>>>...>.......<<<<<..>>>>>...........<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGTGGCGTG...........................GCAGAGC.GGCctA........ATGCACTCG...CCTTGAAAGCGAGA.GACGGC.TAAC....ACCGTC..CGGGGGTTCAAATCCCTC..CGCCACCG... tRNA-Ser-TGA-1-1 Sc: 70.6 >>>>>>>.............................>>>....................<<<.>>>>...>.......<<<<<..>>>>>>.........<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGCGTG...........................CCAGAGC.GGCcgA........ATGGGGCTC...ACTGCTAATGAGTT.GTCCCCCTTCA...AGGGGAC..CGGAGGTTCAAATCCTCT..CGCCTCCG... tRNA-Ser-GCT-1-1 Sc: 71.4
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCTTAGCTCAGTCGGCA.GAGCGTTTCCATGGTAAGGAAAAG...........GtCAACGGTTCGATTCCGTTAGGGGGCT... tRNA-Thr-GGT-1-1 Sc: 72.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCTTAGCTCAGTCGGTA.GAGCGATTCACTCGTAATGAATAG...........GtCAGGAGTTCGATTCTCCTAGGCGGCTCCA tRNA-Thr-CGT-1-1 Sc: 84.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCCTTAGCTCAGT.GGTA.GAGCACTCGCCTTGTAAGCGAGCG...........GtCGTCAGTTCAATCCTGACAGGGGGCT... tRNA-Thr-TGT-1-1 Sc: 70.3
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAG...........GtTGCAGGTTCAAGTCCTGTCGCCCCTG... tRNA-Trp-CCA-1-1 Sc: 78.9
Tyr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...>...........<...>>>>>.......<<<<<<<<<<<<.... GGCAGGTTGCCCGAGCGGCcaA.TGGGAGCGGACTGTAAATCCGTCGCGAA.......AGCTACGCAGGTTCGAATCCTGCACCTGCCACCA tRNA-Tyr-GTA-1-1 Sc: 73.1
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCGATTAGCTCAGCGGGA.GAGCGCTTCCCTGACACGGAAGAG...........GtCACTGGTTCAATCCCAGTATCGCGCACCA tRNA-Val-GAC-1-1 Sc: 78.7 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCCGTGGCTCAGTGGGA.GAGCGTCCGCTTCACACGCGGAAG...........GtCGCTGGTTCGATCCCAGCCGGGACCA... tRNA-Val-CAC-1-1 Sc: 74.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCGTAGCTCAGCGGTA.GAGCTCTGGTTTTACACACCAGCG...........GtCGGCGGTTCGATCCCGTCCGCGCCCA... tRNA-Val-TAC-1-1 Sc: 72.8