Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCATAGCTCAGTCGGTAGAGCGCTTGCATGGCATGCAAGAG...........GtCCGGGGTTCGAATCCCCGTGGCTCCA... tRNA-Ala-GGC-1-1 Sc: 75.3 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCATAGCTCAGCTGGTAGAGCGCTGGAATCGCACTCCAGAG...........GtCCTGGGTTCGAATCCCAGTGGCTCCA... tRNA-Ala-CGC-1-1 Sc: 77.8 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGTTATAGCTCAGTCGGTAGAGCACCTGCTTTGCACGCAGGAG...........GcCGTCGGTTCGAATCCGACTAACTCCA... tRNA-Ala-TGC-1-1 Sc: 81.2
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CTGCCCGTAGCTCAGTT.GGAcAGAGCGCAGCCTTGCGGTGGCTGAG...........GcCGGGGGTTCGAATCCTCCCGGGCAGG... tRNA-Arg-GCG-1-1 Sc: 66.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCTCGTAGCTCAGTC.GGAcAGAGCATCGGTTTCCGGTACCGAAG...........GcCGGGGGTTCGAATCCTCCCGAGCGCA... tRNA-Arg-CCG-1-1 Sc: 73.4 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAGCCtGGAtAGAGCATCGGCCTTCGGAGCCGAGT...........GtCGGGGGTTCGAATCCTCCCGGGCCCG... tRNA-Arg-TCG-1-1 Sc: 72.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCTGTAGCTCAACT.GGAgAGAGCGGTGGCCTCCTAAGCCGCAA...........G.TCGCGGTTCGAGTCCGCGCAGGGGTA... tRNA-Arg-CCT-1-1 Sc: 64.6
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCTCGGTAGCTCAACGGTA.GAGCATGCGGCTGTTAACCGCAGG...........GcTGCTGGTTCGAATCCAGCCCGGGGAG... tRNA-Asn-GTT-1-1 Sc: 70.2
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCGGTAGTTCAGTTGGTttAGAATGCTGCCCTGTCACGGCAGAG...........GtCGCGGGTTCGAGTCCCGTCCGGACCG... tRNA-Asp-GTC-1-1 Sc: 79.1
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTGACGTGGCCGAGTGGTC.AGGCAGAGGCCTGCAAAGCCTCCT...........ACGGCGGTTCGAATCCGCCCGTCACCT... tRNA-Cys-GCA-1-1 Sc: 67.3
Glu tRNAs
>>>>>>>..>>>>............<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGTTCGTCTAGG..GGTctA.GGACGCCGGCCTCTCACGCCGGTA...........GCACGGGTTCGAATCCCGTACGCGGTA... tRNA-Glu-CTC-1-1 Sc: 67.5 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCGCGTTCGTCTAGCCtGGTctA.GGACGCCGGCTTTTCACGCCGGTA...........ACACGGGTTCAAATCCCGTACGCGGTACCA tRNA-Glu-TTC-1-1 Sc: 70.2
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGCCCAGTAGCTCAATCGGCA.GAGCGTCCGGCTCTGGACCGGGAG...........GcTGGTGGTTCGAATCCACCCTGGGCAA... tRNA-Gln-CTG-1-1 Sc: 70.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGCCCGGTGGTCTAAT.GGCA.GGACAGCGGCCTTTGGAGCCGTTA...........G.TGGTGGTTCGAATCCACCCCGGGCAACCA tRNA-Gln-TTG-1-1 Sc: 73.6
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGCTCAGCGGCtA.GAGCATCTGCTTGCCATGCAGAAG...........GtCGTGGGTTCGAATCCCATCGCCCGCT... tRNA-Gly-GCC-1-1 Sc: 81.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAGTAGCTCAGTGGC.A.GAGCATCAGCTTCCCAAGCTGAAG...........GtCGCGGGTTCGATCCCCGTCTCCCGCT... tRNA-Gly-CCC-1-1 Sc: 82.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAGTAGCTCAGGGGT.A.GAGCATCACCCTTCCAAGGTGAAC...........GtCGCGGGTTCGAATCCCGTCTCCCGCT... tRNA-Gly-TCC-1-1 Sc: 79.0
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGGTGTAGCTCAGTCGGTtAGAGCGCTAGGTTGTGGTCCTAGAG...........GcCGTGGGTTCAAATCCCACCACTCACC... tRNA-His-GTG-1-1 Sc: 66.6
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTAGCTCAGGTtGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCAATTCCACCCAGCCCCA... tRNA-Ile-GAT-1-1 Sc: 78.0
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGTTGGTtAGAGCCGCCGACTCATAATCGGCTG...........GtCGCAGGTTCGAGCCCTGCCGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 82.3
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCCGAGTGGCGGAATTGGTaGACGCGCATGGTTGAGGGCCATGT.GGCCG.TTAT.....AGGCCGTGGAGGTTCGAGTCCTCT.CTCGGGCA... tRNA-Leu-GAG-1-1 Sc: 63.2 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>.>>.>........<.<<.<..>>>>>.......<<<<<.<<<<<<<.... GCCCGAGTGGCGGAATTGGTaGACGCGCGTGATTCAGGGTCACGTGGCCCTT........GCGGCCGTGGAGGTTCGAGTCCTCT.CTCGGGCA... tRNA-Leu-CAG-1-1 Sc: 62.9 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.>>........<<.<<<..>>>>>.......<<<<<.<<<<<<<.... GCGAAAGTGGCGGAATTGGTaGACGCGCGAGACTTAGGATCTCGTGGGGCCT........AGCCCCGTGGGGGTTCGAGTCCCCC.CTTTCGCA... tRNA-Leu-TAG-1-1 Sc: 71.4 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>>..........<<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCCGAGTGGCGGAATCGGCaGACGCGACGGATTCAAAATCCGTT.GGTGC.TTAC.....GCACCGTGAGGGTTCAAGTCCCTC.CTCGGGCA... tRNA-Leu-CAA-1-1 Sc: 73.7
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCTCGTAGCTCAACCtGGTAGAGCAACGGACTCTTAATCCGTGA...........GcTGGGGGTTCGAATCCCCCCGGGCCTACCA tRNA-Lys-CTT-1-1 Sc: 81.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GACCTCGTAGCTCAGCTtGGCAGAGCAACGGACTTTTAATCCGTGA...........GtCGCAGGTTCGAATCCTGCCGGGGTCA... tRNA-Lys-TTT-1-1 Sc: 79.0
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGTGGTAGCTCAGTTGGTtAGAGCGTCGGATTCATAACCCGGAG...........GtCGAGGGTTCAAATCCCTCCCACGCTA... tRNA-Met-CAT-1-1 Sc: 74.5
fMet tRNAs
.>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTGGTA.GCTCATCAGGCTCATATCCTGAAG...........GtCGCGGGTTCGAATCCCGCCCCCGCTA... tRNA-fMet-CAT-1-1 Sc: 75.6
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCAGGTAGCTCAGGTGGTAGAGCAACGGCCTGAAAAGCCGTGT...........GtCGGCGGTTCGAATCCGCCCCTGACCA... tRNA-Phe-GAA-1-1 Sc: 79.8
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGACGTGGCGCAGCTcGGTAGCGCACATGTATGGGGTACATGAG...........GtCGCCGGTTCAAATCCGGCCGTCCCGA... tRNA-Pro-GGG-1-1 Sc: 67.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCATGGCGCAGTCcGGTAGCGCGCGTCGTTCGGGACGACGAG...........GtCGCCGGTTCAAATCCGGCTGCCCCGA... tRNA-Pro-CGG-1-1 Sc: 70.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCGTGGCGCAGTCtGGCAGCGCACCTGCTTTGGGGGCAGGTG...........GtCGCCGGTTCGAATCCGGCCGCCCCGA... tRNA-Pro-TGG-1-1 Sc: 72.5
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>>>........<<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGGGTGACCGAGT..GGTcgA.AGGTGCTCGCCTGGAAAGCGAGT.GTGCCGTTTTC....ACGGTAC.CGAGGGTTCGAATCCCTC..CCCCTCCG... tRNA-Ser-GGA-1-1 Sc: 83.9 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>............<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGTGGGGTGGCAGAGCCtGGTtgA.ATGCACCGGTCTCGAAAACCGGAGGGCCC..TCAC......GGGTCCCGGGGGTTCAAATCCCTC..CCCCACCG... tRNA-Ser-CGA-1-1 Sc: 74.3 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>.>..........<.<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGGGTGGCAGAGCCtGGTcgA.ATGCACCGGTCTTGAAAACCGGCGGGCCGC..........GAGGCCCCGGGGGTTCGAATCCCTC..CCCCTCCG... tRNA-Ser-TGA-1-1 Sc: 78.0 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>>>........<<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCCGAGC..GGTcgA.AGGCGCTCCCCTGCTAAGGGAGT.AAACGGTGATGa...GCCGTTT.CGGGGGTTCGAATCCCCC..CCTCTCCG... tRNA-Ser-GCT-1-1 Sc: 84.4
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCTTAGCTCAGT.GGTA.GAGCACATCCATGGTAAGGATGAA...........GtCCCCGGTTCGAGTCCGGGAGGCGGCT... tRNA-Thr-GGT-1-1 Sc: 74.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAACGTAGCTCAGCTGGTA.GAGCAGTCCCCTCGTAAGGGACAG...........GtCACCGGTTCGAGTCCGGTCGTTGGCT... tRNA-Thr-CGT-1-1 Sc: 78.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGACGTAGCTCAACTGGTA.GAGCAGCGCACTTGTAATGCGCAG...........GcTGGCGGTTCGAGTCCGCCCGTCAGCT... tRNA-Thr-TGT-1-1 Sc: 77.7
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGACGTAGCTCAACTGGGAGAGCAGCGGACTCCAAATCCGCCG...........GtTGGGGGTTCGAGTCCTCCCGTCCGTGCCA tRNA-Trp-CCA-1-1 Sc: 81.7
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGGTCGGTAGCGAAGTGGCcaA.ACGCAGCAGACTGTAAATCTGCCGGCTTAT....GCCTtCGGAGGTTCGAATCCTCC.CCGGCCCA... tRNA-Tyr-GTA-1-1 Sc: 73.9
Val tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCCATAGCTCAGTTGGTt.A.GAGCGCTACGTTGACATCGTAGAG...........GtCAGTGGTTCGAGTCCACTTGGACCCA... tRNA-Val-GAC-1-1 Sc: 74.9 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCTTAGCTCAGC.GGTttA.GAGCGCTCGCCTCACACGCGAGAG...........GtCCCTGGTTCAAATCCAGGAGGGCCCA... tRNA-Val-CAC-1-1 Sc: 72.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGGTTAGCTCAGC.GGTttA.GAGCACCTGCCTTACAAGCAGGGG...........GtCGCTGGTTCAAATCCAGCACCGCCCA... tRNA-Val-TAC-1-1 Sc: 85.1
SeC tRNAs
Sup tRNAs