Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCA... tRNA-Ala-TGC-1-1 Sc: 74.9 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCA... tRNA-Ala-TGC-1-2 Sc: 74.9 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCA... tRNA-Ala-TGC-1-3 Sc: 74.9 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCA... tRNA-Ala-TGC-1-4 Sc: 74.9
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCACCCTTAGCTCAACTGGAtA.GAGTACCTGACTACGAATCAGGCG...........GtTAGAGGTTCGAATCCTCT.AGGGTGCA... tRNA-Arg-ACG-1-1 Sc: 75.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... CCACCCTTAGTGTAAT.GGAtA.TCACGTAAGATTCCGGTTCTTGAG...........A.TGGGGGTTCGATTCCCTC.AGGGTGGA... tRNA-Arg-CCG-1-1 Sc: 51.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... CTTCCCTTAGTTAAAT.GGAtA.TAACAAATTCCTCCTAAGAATTA............GtTGCAGGTTCGATTCCTGC.AGGGGAGA... tRNA-Arg-CCT-1-1 Sc: 47.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GGTTCCATAGCTCAGCTGGAtA.GAGCATTCGCCTTCTAAGCGAACG...........GtCGCAGGTTCGAATCCTGC.TGGAATCA... tRNA-Arg-TCT-1-1 Sc: 76.3
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCGCCATAGCTCAGTTGGTAGAGCGCATGACTGTTAATCATGAT...........GtCACAGGTTCGAGCCCTGTTGGCGGAG... tRNA-Asn-GTT-1-1 Sc: 74.4 TCCGCCATAGCTCAGTTGGTAGAGCGCATGACTGTTAATCATGAT...........GtCACAGGTTCGAGCCCTGTTGGCGGAG... tRNA-Asn-GTT-1-2 Sc: 74.4
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCCGTAGTGTAGCGGTtA.TCACGTCGCCCTGTCACGGCGAAG...........AtCGCGGGTTCGATTCCCGTCGGGACCG... tRNA-Asp-GTC-1-1 Sc: 71.6
Cys tRNAs
>>>>>>>..>>>..........<<<..>>>>.......<<<<................>.>>>.......<<<.<.<<<<<<<.... GGCGGTATAGCCAAGTGGTA.AGGCACGGCTCTGCAAAAGCTTG...........AtCGTCGGTTCAAATCCGTC.TACCGCCT... tRNA-Cys-GCA-1-1 Sc: 58.5
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATCGCCAAGCGGTA.AGGCAAGGGACTTTGACTCCCTCA...........TgCGTTGGTTCGAATCCAGCTACCCCAG... tRNA-Gln-TTG-1-1 Sc: 61.4 TGGGGTATCGCCAAGCGGTA.AGGCAAGGGACTTTGACTCCCTCA...........TgCGTTGGTTCGAATCCAGCTACCCCAG... tRNA-Gln-TTG-1-2 Sc: 61.4
Glu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTCCGTTGGTCAAGGGGTtA.AGACACCGCCTTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGACTA... tRNA-Glu-TTC-1-1 Sc: 65.3 GGTCCGTTGGTCAAGGGGTtA.AGACACCGCCTTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGACTA... tRNA-Glu-TTC-1-2 Sc: 65.3 GGTCCGTTGGTCAAGGGGTtA.AGACACCGCCTTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGACTA... tRNA-Glu-TTC-1-3 Sc: 65.3 GGTCCGTTGGTCAAGGGGTtA.AGACACCGCCTTTTCACGGCGGTA...........ACACGGGTTCGATTCCCGTACGGACTA... tRNA-Glu-TTC-2-1 Sc: 64.1
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGAACGTAGTTCAGTGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAATCCCGT.CGTTCGCT... tRNA-Gly-GCC-1-1 Sc: 84.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTAGTTTAGTGGTA.AAACTACAGCCTTCCAAGCTGTT............GtCGCGAGTTCGATTCTCGT.CACCCGCT... tRNA-Gly-TCC-1-1 Sc: 73.8 GCGGGTGTAGTTTAGTGGTA.AAACTACAGCCTTCCAAGCTGTT............GtCGCGAGTTCGATTCTCGT.CACCCGCT... tRNA-Gly-TCC-1-2 Sc: 73.8
His tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTGGTGAAGTGGTtA.ACACATCAGATTGTGGCTCTGACA...........TtCGGGGGTTCGATTCCCCTCACTCGCC... tRNA-His-GTG-1-1 Sc: 61.1
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCGTAGCTCAGATGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCGATTCCACTCGTGCCCA... tRNA-Ile-GAT-1-1 Sc: 76.3 GGGCGCGTAGCTCAGATGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCGATTCCACTCGTGCCCA... tRNA-Ile-GAT-1-2 Sc: 76.3 GGGCGCGTAGCTCAGATGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCGATTCCACTCGTGCCCA... tRNA-Ile-GAT-1-3 Sc: 76.3
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGGGATGGCGGAATTGGCaG.ACGCGCAGGACTAAGGATCCTGT.GACCGCT.......TTAGGTCGTGTGGGTTCAAGTCCCAC.TCTCCGCA... tRNA-Leu-AAG-1-1 Sc: 64.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>...............<<...>>>>>.......<<<<<.<<<<<<<.... GCGGAGGTGGTGGAAC.GGCaG.ACACGCATGCTTCAGGCGCATGTGCCCAT...........CGGGTGTGAGGGTTCAAATCCCTT.CCTCCGCA... tRNA-Leu-CAG-1-1 Sc: 58.9 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGGTTTGGCGGAATTGGCaG.ACGCACCAGATTTAGGATCTGGC.GCTTT...........CGGGCGTGGGGGTTCAAGTCCCTT.AACCCGCA... tRNA-Leu-TAG-1-1 Sc: 63.9 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGCGTGGCGGAATTGGCaG.ACGCGCTGGACTCAAAATCCAGT.GTCC...GCAA......GGACGTGCCGGTTCGACCCCGGC.CGCCGGTA... tRNA-Leu-CAA-1-1 Sc: 72.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGCGGAACTGGCaG.ACGCACAGGACTTAAAATCCTGC.GATG...GCAA......CATCGTACCGGTTCGATTCCGGT.CCTCGGCA... tRNA-Leu-TAA-1-1 Sc: 70.1
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CCTTCCTTAGCTCAGCTGGCAGAGCAGCGGACTCTTAATCCGTGG...........GtCGTAGGTTCGATCCCTACAGGGAGGA... tRNA-Lys-CTT-1-1 Sc: 70.4 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GACTCGTTAGCTCAGTTGGTAGAGCAATTGACTTTTAATCAATGG...........GtCGCTGGTTCGAGCCCAGCACGAGTCA... tRNA-Lys-TTT-1-1 Sc: 78.5
Met/Ile2 tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGATGGAGCAGCTaGGTAGCTCGTCGGGCTCATAACCCGAAG...........GtCGTAGGTTCAAATCCTGCTCCCGCAA... tRNA-fMet-CAT-1-1 Sc: 71.8 CGCGGGATGGAGCAGCTaGGTAGCTCGTCGGGCTCATAACCCGAAG...........GtCGTAGGTTCAAATCCTGCTCCCGCAA... tRNA-fMet-CAT-1-2 Sc: 71.8
Phe tRNAs
>>>.>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<.<<<.... GGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGT...........GtCGGCGGTTCGATTCCGTCTCGCGCCA... tRNA-Phe-GAA-1-1 Sc: 68.3 GGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGT...........GtCGGCGGTTCGATTCCGTCTCGCGCCA... tRNA-Phe-GAA-1-2 Sc: 68.3
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGAAGTAGCTCAGCTtGGTAGAGTACTTGGTTTGGGACCAAGGT...........GtCGCAGGTTCGAATCCTGTCTTCCCGA... tRNA-Pro-TGG-1-1 Sc: 73.3
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>.>>.........<<.<..>>>>>.......<<<<<..<<<<<<<.... GGAAGATTACTCAAGA..GGCtcA.AGAGGCCGTGTTGGAAACGCGGT.AGGCGTGTAA.CAGCGTGCGTGGGTTCGAATCCCAT..GTCTTCCG... tRNA-Ser-GGA-1-1 Sc: 53.1 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>.>>.>.....<.<<.<..>>>>>.......<<<<<..<<<<<<<.... GGAGGATTACCCAAGTCcGGCtgA.AGGGAACGGTCTTGAAAACCGTC.AGGCGTGTAA.AAGCGTGCGTGGGTTCGAATCCCAC..ATCCTCCT... tRNA-Ser-TGA-1-1 Sc: 70.4 >>>>>>>..>>>..............<<<.>>>>.........<<<<..>.>>.>.....<.<<.<..>>>>>.......<<<<<..<<<<<<<.... GGAGGATTACCCAAGTCcGGCtgA.AGGGAACGGTCTTGAAACCCGTC.AGGCGTGTAA.AAGCGTGCGTGGGTTCGAATCCCAC..ATCCTCCT... tRNA-Ser-TGA-2-1 Sc: 58.9 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>.....<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAATTACTCAAGA..GGCtgA.AGAGGACGGTTTGCTAAATCGTTAGGTCGGGTAA.CTGGCG.CAAGGGTTCGAATCCCTT..ATTCTCCG... tRNA-Ser-GCT-1-1 Sc: 71.2
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGGTTTAGCTCAGTCGGTAGAGCGCATCCATGGTAAGGATGAG...........GtCGCCGGTTCAATCCCGGCAACTAGCA... tRNA-Thr-GGT-1-1 Sc: 66.6 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGCTTAGCTCAGTTGGTAGAGCATCTGATTTGTAATCAGAGG...........GtCGCGTGTTCAAGTCATGTAGCCGGCA... tRNA-Thr-TGT-1-1 Sc: 76.3
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... ACGGGCATAGTTTAAAGGTA.GAACTAAGGTCTCCAAAACCTTCA...........GTGTGGGTTCAATTCCTACTGCCCGTG... tRNA-Trp-CCA-1-1 Sc: 57.8
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GGAGAGATAGCGAAGAGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCTT.......CGGGTtCGGGGGTTCGAATCCCTC.TCTCTCCA... tRNA-Tyr-GTA-1-1 Sc: 66.7 GGAGAGATAGCGAAGAGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCTT.......CGGGTtCGGGGGTTCGAATCCCTC.TCTCTCCA... tRNA-Tyr-GTA-1-2 Sc: 66.7
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGAGTTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCAGCGGTTCGATCCCGTTAACTCCCA... tRNA-Val-TAC-1-1 Sc: 75.2 GGGAGTTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCAGCGGTTCGATCCCGTTAACTCCCA... tRNA-Val-TAC-1-2 Sc: 75.2 GGGAGTTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCAGCGGTTCGATCCCGTTAACTCCCA... tRNA-Val-TAC-1-3 Sc: 75.2