Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAG...........GtCGGCGGTTCGATCCCGCCTAGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 77.2 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGTCGTAGCTCAGCTGGGAGAGCACCTGCCTTGCACGCAGGGG...........GtCGGGAGTTCGATCCTCCCCGGCTCCACCA tRNA-Ala-TGC-1-1 Sc: 81.4 GGGGTCGTAGCTCAGCTGGGAGAGCACCTGCCTTGCACGCAGGGG...........GtCGGGAGTTCGATCCTCCCCGGCTCCACCA tRNA-Ala-TGC-1-2 Sc: 81.4
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCAGTTGGAtAGAGTATCTGGCTACGAACCAGGGG...........GtCGGAGGTTCGAATCCTTCCGGGCGCGCCA tRNA-Arg-ACG-1-1 Sc: 84.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCTCGTAGCTCAGCTGGAtAGAGTACTTGGCTTCGAACCAAGGT...........GtCGGGGGTTCGAGTCCCTCCGAGCGCGCCA tRNA-Arg-TCG-1-1 Sc: 81.0 >>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCCCGGTGGCACAGCTGGAtAGCGCAGCCCCCTCCTAAGGGGCAG...........GtCGGAGGTTCAAATCCTCTCCGGGACGCCA tRNA-Arg-CCT-1-1 Sc: 69.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCGTAGCTCATCTGGAtAGAGCATCGGCCTTCTAAGCCGAGG...........GtAGCAGGTTCGAATCCTGCCGGGCGTGCCA tRNA-Arg-TCT-1-1 Sc: 79.6
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCCCGGTAGCTCAGTCGGTAGAGCGGATGACTGTTAATCATTAG...........GtCACAGGTTCGAGTCCTGTCCGGGGAGCCA tRNA-Asn-GTT-1-1 Sc: 84.8
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGTGGTAGTTCAGCAGGTtAGAATACCGGCCTGTCACGCCGGGG...........GtCGCGGGTTCGAGTCCCGTCCACTCCGCCA tRNA-Asp-GTC-1-1 Sc: 86.1
Cys tRNAs
>>>>>.>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<.<<<<<.... GGCTGTGTGGCAGAGTGGTT.ATGCAGCGGCCTGCAAAGCCGTGT...........ACGCCGGTTCGATTCCGGCCTCAGCCTCCA tRNA-Cys-GCA-1-1 Sc: 70.3
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GTCCCCATCGTCTAGAGGCctA.GGACATCGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTTGGGGACGCCA tRNA-Glu-TTC-1-1 Sc: 61.7 GTCCCCATCGTCTAGAGGCctA.GGACATCGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTTGGGGACGCCA tRNA-Glu-TTC-1-2 Sc: 61.7
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTGTCGCCAAGTGGTA.AGGCACAGGGTTTTGATCCCTGCA...........TtCCTAGGTTCGAATCCTAGCACCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 70.6
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGTTGGTA.GAGCACAACCTTGCCAAGGTTGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 88.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAAT.GGTA.GAACTTCAGCTTCCCAAGCTGATA...........G.CGTGGGTTCGATTCCCATCACCCGCTCCA tRNA-Gly-CCC-1-1 Sc: 82.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAAT.GGTA.GAACTTCAGCCTTCCAAGCTGATA...........G.CGTGGGTTCGATTCCCATCACCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 83.1
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGGCGTAGCTCAGTTGGTAGAGCCCCGGGTTGTGATCCCGGTT...........GtCGTGGGTTCGAGTCCCATCGCTCACCCCA tRNA-His-GTG-1-1 Sc: 75.0
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTGTAGCTCAGTTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GcCGGTGGTTCAAGTCCACCCAGACCCACCA tRNA-Ile-GAT-1-1 Sc: 87.4
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGCTCAGTTGGTtAGAGCAGCGGACTCATAATCCGTTG...........GtCCTAGGTTCAAGTCCTAGTGGGCCCACCA tRNA-Ile2-CAT-1-1 Sc: 88.5
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...............<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGAAGTGGTGGAATTGGTaGACACGCCGTCTTGAGGGGGCGGTGGC...GCAA........GCCGTGTCGGTTCGAGTCCGAC.CTTCGGCACCA tRNA-Leu-GAG-1-1 Sc: 69.6 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.>.........<.<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGAGGTGGTGGAATTGGTaGACACGCTAGCTTCAGGTGCTAGTGGGGGT.........GACCCCGTGGAGGTTCGAGTCCTCT.TCTCGGTACCA tRNA-Leu-CAG-1-1 Sc: 70.2 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...............<<<..>>>>>.......<<<<<.<<<<<<<.... GCGAAAGTGGCGGAACTGGTaGACGCGCTGGATTTAGGTTCCAGTGGG...GTAA........CCCGTGAGAGTTCGAGTCTCTC.CTTTCGCACCA tRNA-Leu-TAG-1-1 Sc: 76.4 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.>.........<.<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGCGGAATTGGTaGACGCGCCGGATTCAAAATCCGGTGGTGGT.........GACACCGTGTGGGTTCGAGTCCCAC.CCTCGGTACCA tRNA-Leu-CAA-1-1 Sc: 79.5 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCCAGGTGGCGAAACAGGTaGACGCAAGGGACTTAAAATCCCTCGGAGC.TTAAa.....CCTCCGTGCCGGTTCGACTCCGGC.CCTGGGCACCA tRNA-Leu-TAA-1-1 Sc: 74.0
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGTTAGCTCAGTTGGTAGAGCAGGAGGCTCTTAACCTCTGT...........GtCATAGGTTCGAGACCTATACGGCCCACCA tRNA-Lys-CTT-1-1 Sc: 79.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGTTAGCTCAGGTGGTAGAGCAGGAGGCTTTTAACCTCTGT...........GtCATAGGTTCGAATCCTATACGGCCCACCA tRNA-Lys-TTT-1-1 Sc: 82.6 GGGCCGTTAGCTCAGGTGGTAGAGCAGGAGGCTTTTAACCTCTGT...........GtCATAGGTTCGAATCCTATACGGCCCACCA tRNA-Lys-TTT-1-2 Sc: 82.6
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTACGTAGCTCAGCCGGTtAGAGCGCGGCACTCATAATGCTGAG...........GtCGGTGGTTCGAGTCCACCCGTAGCCACCA tRNA-Met-CAT-1-1 Sc: 83.3 >........>>>...........<<<....>>.......<<...................>>>>>.......<<<<<......<.... G......TGGTTAAAATTGT.TAAACAT..GACTCATAATCCGTTG...........GtCCTAGGTTCAAGTCCTAGTGGGCCCACCA tRNA-Met-CAT-2-1 Sc: 30.7
fMet tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... TGCGGGGTGGAGCAGCCtGGTAGCTCGTCGGGCTCATAACCCGAAG...........GtCGTAGGTTCAAATCCTGCCCCCGCTACCA tRNA-fMet-CAT-1-1 Sc: 72.6
Phe tRNAs
>>>>>>>..>>>>...............<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GGCCAGATAGCTCAGTCGGT.......AGAGCAGAGGACTGAAAATCCTCGT...........GtCGGCAGTTCGATTCTGCC.TCTGGCCACCA tRNA-Phe-GAA-1-1 Sc: 81.5 .........>>>.................<<<.>>.>>.......<<.<<................>>>>>.......<<<<<............ ........AAATCAATTGGTtattattGAATTAGGTGACTGAAAATCCTCGT...........GtCGGCAGTTCGATTCTGCC.TCTGGCCACCA tRNA-Phe-GAA-2-1 Sc: 27.8
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCGTAGCGCAGCCtGGTAGCGTACTAGCATGGGGTGCTAGTG...........GtCGAAGGTTCAAATCCTTCCGTCCCGACCA tRNA-Pro-GGG-1-1 Sc: 67.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGAGTGTAGCTCAGCCtGGTAGAGCACTGCCTTCGGGAGGCAGGG...........GtCGCAGGTTCAATTCCTGTCACTCCGACCA tRNA-Pro-CGG-1-1 Sc: 80.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTAGCGCAGTCtGGTAGCGCGCCTGCTTTGGGAGCAGGAT...........GtCGGGAGTTCGAATCTCTCCACCCCGACCA tRNA-Pro-TGG-1-1 Sc: 81.4
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>...........<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGGCCGAGCGGTcgA.AGGCGCACGCCTGGAAAGTGTGT.ATACG.GAAA......CGTAT.CGAGGGTTCGAATCCCTC..TCTCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 83.8 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.>.........<.<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCTGAGCGGTtgA.AAGCGGCGGTCTTGAAAACCGTTGAAGGGC.........GACCTTCCCAGGGTTCGAATCCCTG..CCTCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 85.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>.........<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGGCCGAGAGGTcgA.AGGCGCTCCCCTGCTAAGGGAGT.ATGGGACAAAa....TCCCAT.CGAGGGTTCGAATCCCTC..TCTCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 83.3
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCACATAGCTCAGGTGGTAGAGCACTTCCTTGGTAAGGAAGAG...........GtCGTTGGTTCGAGTCCAGTTGTGGGCACCA tRNA-Thr-GGT-1-1 Sc: 83.2 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGTTGTAGCTCAGTCGGTAGAGCAATTGATTCGTAATCAATAG...........GtCCGCGGTTCGATTCCGCGCAACGGCA... tRNA-Thr-CGT-1-1 Sc: 77.8 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGGCGTAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtCCCGGGTTCGATTCCTGGTGCCAGCACCA tRNA-Thr-TGT-1-1 Sc: 87.7
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCCAGTAGCTCAATTGGCAGAGCGGCGGTCTCCAAAACCGCAG...........GtTGGGGGTTCGATTCCCTCCTGGCCTGCCA tRNA-Trp-CCA-1-1 Sc: 86.9
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>.>.........<.<...>>>>>.......<<<<<<<<<<<<.... GGAGGGGTTCCCGAGCGGTcaA.AGGGATCAGACTGTAAATCTGACGGCTC.......TGCCTtCGAAGGTTCGAATCCTTCCCCCTCCACCA tRNA-Tyr-GTA-1-1 Sc: 78.3
Val tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCACGTAGCTCAGT.GGTA.GAGCACCACCTTGACATGGTGGTG...........GtCGGTGGTTCGATCCCACTCGTGCCTACCA tRNA-Val-GAC-1-1 Sc: 78.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTGCTTAGCTCAGCTGGGA.GAGCATCGCCCTTACAAGGCGAGG...........GtCGCAGGTTCGATCCCTGCAGCACCCACCA tRNA-Val-TAC-1-1 Sc: 87.6
SeC tRNAs
Sup tRNAs