Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCGGTAGCTCAGTGGGA.GAGCGCCTGCTTGGCGTGTAGGAG...........GtCGGGGGTTCAAATCCCCTCCGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 81.2 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGACGTAGCTCAGTGGGA.GAGCGCCTGCATCGCAAGCAGGAG...........GtCGGGGGTTCAAATCCCCTCGTCTCCA... tRNA-Ala-CGC-1-1 Sc: 79.4 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATGTAGCTCAGCGGGA.GAGCGCCTGCTTTGCAAGCAGGAG...........GtCGAGGGTTCAAATCCCTCCATCTCCA... tRNA-Ala-TGC-1-1 Sc: 83.4
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGCCCGTAGCTCAACTGGAcAGAGCGTGGGACTACGGATCCCAAG...........GtTGCGGGTTCGACTCCCGCCGGGCTGG... tRNA-Arg-ACG-1-1 Sc: 70.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGCCCGTAGCTCAGTTGGAtAGAGCGTGGGTCTCCGGAACCCAAG...........GtCGGGGGTTCAAGTCCCCCCGGGCACG... tRNA-Arg-CCG-1-1 Sc: 73.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCCCCGTAGCTCAGGAGGAtAGAGCGCGAGATTCCTAATCTCGAG...........GtCGGAGGTTCGACTCCTCCCGGGGACG... tRNA-Arg-CCT-1-1 Sc: 68.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCTGGAcAGAGCAAGGGATTTCTAATCCCTAG...........GtCGGGGGTTCGAGTCCCTCCGGGCCCG... tRNA-Arg-TCT-1-1 Sc: 80.7
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCGGGGTAGCTCAACGGGcA.GAGCGGGTGGCTGTTAACCACCAG...........GtTGGGGGTTCGAGTCCCTCCCCCGGAG... tRNA-Asn-GTT-1-1 Sc: 71.2
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGCCGTAGTTCAGCCaGGTcAGAACGCCGGCCTGTCAAGCCGGAG...........GtCGCGGGTTCAAGTCCCGTCGGCTCCGCCA tRNA-Asp-GTC-1-1 Sc: 91.8
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCAACGTGGCCGAGTGGCT.AGGCGAGGGACTGCAAATCCCTTC...........TaCGGCGGTTCGAATCCGCCCGTTGCCT... tRNA-Cys-GCA-1-1 Sc: 64.0
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTGTAGCTCAACTGGCAGAGCACCGGACTTTGGATCCGGGG...........GcTCCTGGTTCGAGTCCAGGCACCCCAG... tRNA-Gln-TTG-1-1 Sc: 74.9
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCCCGTCGTCTAGCCcGGTcaAGGACACCGCCCTTTCAAGGCGGAG...........AaCGCGGGTTCAAATCCCGCCGGGGGTG... tRNA-Glu-TTC-1-1 Sc: 69.5
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGCTCAGAGGTG.GAGCGGCTGCTTGCCATGCAGCAG...........GtCGCGGGTTCGAGTCCCGTCGCCCGCT... tRNA-Gly-GCC-1-1 Sc: 77.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTGGCTCAGTGGTA.GAGCGTCTGCTTCCCAAGCAGAAG...........GtCGCGGGTTCGATTCCCGTCGCCCGCT... tRNA-Gly-CCC-1-1 Sc: 86.6 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGCTCAGTGGTA.GAGCAGCTGCCTTCCAAGCAGCAG...........GtCGCGGGTTCGAGTCCCGTCGCCCGCT... tRNA-Gly-TCC-1-1 Sc: 87.8
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GAGGGTGTAGCTCAGTTGGTAGAGCAGTGGACTGTGGATCCACGG...........GtCGCGGGTTCGAGTCCCGTCACCCTCCCCA tRNA-His-GTG-1-1 Sc: 87.2
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTCTAGCTCAGTCGGTtAGAGCGTGCCCCTGATAAGGGCAAG...........GtCGGTGGTTCAAGTCCACCGAGGCCCA... tRNA-Ile-GAT-1-1 Sc: 73.6
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGAGTGGCGGAATTGGCaGACGCGCTGTCTTGAGGGGGCAGT.GCCC..GAAA......GGGCGTGCGGGTTCGACTCCCGC.CTCCGGCACCA tRNA-Leu-GAG-1-1 Sc: 72.4 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTGGCGGAATTGGCaGACGCGCGGGACTCAGGATCCCGT.GGGC..TTAC......GCCCGTGAGGGTTCAACTCCCTC.CACCCGCA... tRNA-Leu-CAG-1-1 Sc: 72.3 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTGGCGGAATTGGCaGACGCGCGGGACTTAGGATCCCGT.GGGC..TTAT......GCCCGTGAGGGTTCGACTCCCTC.CACCCGCA... tRNA-Leu-TAG-1-1 Sc: 73.9 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGAGTGGCGGAACTGGCaGACGCGGGAGATTCAAAATCTCCT.GCCC..GCAA......GGGCGTGGGGGTTCGAATCCCTC.CTCCGGCA... tRNA-Leu-CAA-1-1 Sc: 73.7 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..............<<<..>>>>>.......<<<<<.<<<<<<<.... GGGGGTGTGGCGGAACTGGCaGACGCAGGGGACTTAAAATCCCCAGGGGAAA........CCCCCCGTGAGGGTTCGAGTCCCTC.CACCCCCA... tRNA-Leu-TAA-1-1 Sc: 71.6
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTGGTAGCTCAGCT.GGCAGAGCAACGGACTCTTAATCCGTGG...........GtCGCGGGTTCGACTCCCGCCCAGCCCA... tRNA-Lys-CTT-1-1 Sc: 87.0 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GAGCCGGTAGCTCAGCCtGGTAGAGCAACGGACTTTTAATCCGTGG...........GtCGAGGGTTCAAATCCCTCCCGGCTCA... tRNA-Lys-TTT-1-1 Sc: 82.2
Met/Ile2 tRNAs
.>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGCGGGTTCAAATCCCGCCCCCGCAA... tRNA-fMet-CAT-1-1 Sc: 76.1 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTGCGTAGCTCAAT..GGC.A.GAGCGGGCGGCTCATAACCGCCCG...........GtTGGGGGTTCGAGTCCTCCCGCACCCA... tRNA-Met-CAT-1-1 Sc: 73.3 GGCGGCGTAGCTCAGCT.GGTtA.GAGCGGAGATCTCATAAGTCTCAG...........GtCGGAGGTTCGAGTCCTCCCGCCGCCA... tRNA-Met-CAT-2-1 Sc: 72.6
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCGGTAGCTCAGTTGGTAGAGCACCCGGCTGAAAACCGGGGT...........GtCGGCGGTTCGAGTCCGCCCTGGGCCA... tRNA-Phe-GAA-1-1 Sc: 79.8
Pro tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTGGCGCAGGAGGAAGCGCGCTGGCATGGGGGGCCAGAG...........GtCACGGGTTCAAGTCCCGTCACCCCGA... tRNA-Pro-GGG-1-1 Sc: 60.6 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCGTGGCGCAGGTGGTGGCGCGTCGGCTTCGGGAGCCGAAG...........GtCGGGGGTTCAAGTCCCCTCGCCCCGA... tRNA-Pro-CGG-1-1 Sc: 72.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTGTAGCTCAGGTGGTAGAGCGCTGGCTTTGGGAGCCAGAG...........GtCGCAGGTTCAAGTCCTGTCGCCCCGA... tRNA-Pro-TGG-1-1 Sc: 78.1
SeC tRNAs
>>>>>>>....>>...........<<.>.>>>>.......<<<<..<..>>>>>>>....<<<<<<<...>>>>>.......<<<<<.<<<<<<<.... GGGAGAGcgTGGCAGGCtGGTGCCGCCCcGGGACTTCAAATCCCgtGAGGGGTTGCTCTGGCAATCCCtGGAGGGTTCGATTCCCTTgCTCTCCCG... tRNA-SeC-TCA-1-1 Sc: 98.8
Ser tRNAs
>>>>>>>..>>>...................<<<.>>>>>.............<<<..<<..>>>>>>.......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGACCGAGT.GGCcgA.......AGGTGCAGCA.....CTGGAAA.TGC..TGTGTGCGGGTTAAA.CCCCGCACCGCGGGTTCGAATCCCGC..CCTCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 93.9 >>>>>>>..>>>...................<<<.>>>>>.............<<<..<<..>>>>>>.......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGCGAGGTGCCGGAGT.GGCcgA.......ACGGGGCGGT.....TTCGAAA.ATC..GCT.GTGGGT.TCAAa.GCCCAC.CGGGGGTTCGAATCCCTC..CCTCGCCG... tRNA-Ser-CGA-1-1 Sc: 72.8 >.>>>>>..>.......................<..>>>>.............<<<..<....>>>>>.......<<<<<...>>>>>.......<<<<<..<<<<<.<.... GTGGGCGGGG....GATGGTt.A.aagga.AAGCACTGGCtaagcCTGTAGAaGCCctAATAGCCGGGCGAA..CCTCGGA.CGAGGGTTCGATTCCCTC..CGCCTCCACCA tRNA-Ser-CGA-2-1 Sc: 27.5 >>>>>>>..>>>...................<<<.>>>>>.............<<<..<<..>>>>>>>.....<<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGGGTGACCGAGC.GGCcgA.......AGGTGGGTGA.....TTTGAAA.TCA..CCT.GTGGGTCTTTAgGGCCCAC.CGAGGGTTCGAATCCCTC..CCCCTCCG... tRNA-Ser-TGA-1-1 Sc: 80.6 >>>>>>>..>>>...................<<<.>>>>>.............<<<..<<..>>>>>>>.....<<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCCGAGA.GGCcgA.......AGGCGGCTCC.....TTGCTAA.GGA..GTT.GTAGGGTTTACaGCCCTAC.CGCGGGTTCGAATCCCGC..CCTCTCCG... tRNA-Ser-GCT-1-1 Sc: 84.8
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCAGGTAGCTCAGCGGGcA.GAGCACACCCTTGGTAAGGGTGAG...........GtCGCCGGTTCAAGTCCGGTCCTGGGCT... tRNA-Thr-GGT-1-1 Sc: 74.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGCGTAGCTCAGCGGT.A.GAGCGAGGCACTCGTAATGCCTAG...........GtCGTGGGTTCAAATCCCACCGCCGGCT... tRNA-Thr-CGT-1-1 Sc: 81.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGGCGTAGCTCAGTGGGcA.GAGCGCGGGATTTGTAATCCCGCG...........GgCGTGGGTTCAAGTCCCACCGCCAGCT... tRNA-Thr-TGT-1-1 Sc: 77.4
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCACTAGCTCAACTGGCAGAGCGCGGGACTCCAAATCCCGCG...........GtTGGGGGTTCGAGTCCTCCGTGCCCCG... tRNA-Trp-CCA-1-1 Sc: 76.9
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>.>........<.<<...>>>>>.......<<<<<<<<<<<<.... GGAGGGGTGGCCGAGTGGCcaA.AGGCAGGGGACTGTAAATCCCCCGGGCTC......CGCCCTgCGCAGGTTCGAATCCTGCCCCCTCCA... tRNA-Tyr-GTA-1-1 Sc: 77.4
Val tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCGCATAGCTCAGTAGGCA.GAGCGCTGGCCCGACACGCCAGAG...........GtCGGCGGTTCGAGTCCGCCTGCGCCTA... tRNA-Val-GAC-1-1 Sc: 70.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGATTAGCTCAGT.GGTA.GAGCGCCATCCTCACACGATGGAG...........GtCGGAGGTTCGACTCCTCCATCGCCCA... tRNA-Val-CAC-1-1 Sc: 77.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCGCGTAGCTCAGATGGAA.GAGCGCCGCCCTTACAAGGCGGAG...........GtCGGCGGTTCGAGTCCGCCCGTGCCTA... tRNA-Val-TAC-1-1 Sc: 75.4