Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAG...........GtCGGCGGTTCGATCCCGCCTGGCTCCACCA tRNA-Ala-GGC-1-1 Sc: 77.6 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCGGTAGCTCAGTTGGGAGAGCGCAGCAATCGCACTGCTGAG...........GtCGTGGGTTCGACTCCCATCCGCTCCACCA tRNA-Ala-CGC-1-1 Sc: 82.3 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGG...........GtCGTCGGTTCGATCCCGACTGGCTCCACCA tRNA-Ala-TGC-1-1 Sc: 86.3
Arg tRNAs
.>>>>>>>..>>>>.............<<<<.>>>>>.........<<<<<................>>>>>.......<<<<<.<<<<<<<.... .GCGCCCGTAGCTCAGTTGGAtA....GAGTACCTGGCTACGAA..CCAGGTG...........GtCGGAGGTTCGAATCCTTC.CGGGCGCGCCA tRNA-Arg-ACG-1-1 Sc: 88.8 .>>>>>>>..>>>>.............<<<<.>>>>>.........<<<<<................>>>>>.......<<<<<.<<<<<<<.... .GCGCCCGTAGCTCAGCTGGAtA....GAGCGCTGCCCTCCGGA..GGCAGAG...........GtCAGAGGTTCGAATCCTCT.CGGGCGCGCCA tRNA-Arg-CCG-1-1 Sc: 86.9 .>>>..>>..>.>...............<.<.>>>.............<<<................>>>>>.......<<<<<.<<..<<<.... aGTCGAAGTGG.TAAGA.....A....AA.TCCCTCG..CCGAA....AGGCG.............TGCCGGTTCGATTCCGGC.CTCGGGCACCA tRNA-Arg-CCG-2-1 Sc: 21.1 .>>>>>>>..>>>>.............<<<<.>>>>>.........<<<<<................>>>>>.......<<<<<.<<<<<<<.... .GCCCCGGTAGCTCAGATGGAtA....GAGCGTCCCCCTCCTAA..GGGGAAG...........GtCTCAGGTTCGAATCCTGA.TCGGGGCACCA tRNA-Arg-CCT-1-1 Sc: 82.4 .>>>>>>>..>>>>.............<<<<.>>>>>.........<<<<<................>>>>>.......<<<<<.<<<<<<<.... .GCGCCCGTAGCTCAACCGGAtA....GAGCATCGGCCTTCTAA..GCCGAGG...........GtTGCAGGTTCGAGTCCTGC.CGGGCGCGCCA tRNA-Arg-TCT-1-1 Sc: 88.8
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCCCGGTAGCTCAGTCGGTAGAGCGGGTGACTGTTAATCACTAG...........GtCGGCGGTTCGAGCCCGTCCCGGGGAGCCA tRNA-Asn-GTT-1-1 Sc: 79.1
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGTGGTAGTTCAGCTGGTtAGAATACCGGCCTGTCACGCCGGGG...........GtCGCGGGTTCGAGTCCCGTCCACTCCGCCA tRNA-Asp-GTC-1-1 Sc: 90.0
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>.>>>.......<<<.<<<<<<<<.... GGCTGGGTGGCAGAGTGGTT.ATGCAGCGGCCTGCAAAGCCGTGT...........ACGCCGGTTCGATTCCGACCCCAGCCTCCA tRNA-Cys-GCA-1-1 Sc: 67.7
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCCCTTCGTCTAGCGGTctA.GGACGTCGCCCTCTCACGGCGAAA...........ACAGGGGTTCGAGTCCCCTAGGGAGCGCCA tRNA-Glu-CTC-1-1 Sc: 69.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GTCCCCATCGTCTAGAGGCctA.GGACACCGCCCTTTCACGGCGGCG...........ACCGGGGTTCGAATCCCCGTGGGGACGCCA tRNA-Glu-TTC-1-1 Sc: 66.0
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGGATCGTCTAGCGGTA.GGACTACGGACTCTGACTCCGTCA...........A.CCCAGGTTCGAATCCTGGTCCCCCAGCCA tRNA-Gln-CTG-1-1 Sc: 67.4 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGCCGTCGCCAAGCGGTA.AGGCACCGGGTTTTGATCCCGGCA...........TtCGCAGGTTCGAATCCTGCCGGCCCAGCCA tRNA-Gln-TTG-1-1 Sc: 78.4
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGTTGGTA.GAGCACAACCTTGCCAAGGTTGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA tRNA-Gly-GCC-1-1 Sc: 88.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAAT.GGTA.GAACGGCAGCTTCCCAAGCTGCAT...........A.CGAGGGTTCGATTCCCTTCACCCGCTCCA tRNA-Gly-CCC-1-1 Sc: 82.9 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAAT.GGTA.GAACCTCAGCCTTCCAAGCTGATG...........G.TGTGGGTTCGATTCCCATCACCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 84.6
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGCTGTAGCTCAGGTGGTAGAGCCCCGGATTGTGATTCCGGTT...........GtCGTGGGTTCGAGTCCCATCAGCCACCCCA tRNA-His-GTG-1-1 Sc: 77.0
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCTGTAGCTCAGTTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GtCGGTGGTTCAAATCCACCCAGACCCACCA tRNA-Ile-GAT-1-1 Sc: 88.4
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAGTTGGTtAGAGCAGGGGACTCATAATCCCTTG...........GtCCTCGGTTCGAGTCCGAGCGGGCCCACCA tRNA-Ile2-CAT-1-1 Sc: 86.3
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.........<<<..>>>>>.......<<<<<.<<<<<<<.... GCAGATGTGGTGGAATTGGTaGACACGCCGTCTTGAGGGGGCGGT.GGC.GCAA....GCCGTGTCGGTTCGAGTCCGAC.CATCTGCACCA tRNA-Leu-GAG-1-1 Sc: 69.4 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGCTAGT.GGGGGTAA...CCCCGTGGAGGTTCAAGTCCTCT.CCTCGGCACCA tRNA-Leu-CAG-1-1 Sc: 78.7 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.........<<<..>>>>>.......<<<<<.<<<<<<<.... GCGAAAGTGGCGGAACTGGTaGACGCGCTGGATTTAGGTTCCAGTGGGG.GAA.....CCCGTGAGAGTTCGAGTCTCTC.CTTTCGCACCA tRNA-Leu-TAG-1-1 Sc: 74.5 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGATGGCGGAACTGGTaGACGCGCCGGACTCAAAATCCGGT.TCTGGCAA...CAGAGTGCGAGTTCGATTCTCGC.TCCCGGCACCA tRNA-Leu-CAA-1-1 Sc: 82.6
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGTTAGCTCAATTGGTAGAGCAGTGGACTCTTAATCCATTG...........GtTGTAGGTTCAAGTCCTACACGGCCCACCA tRNA-Lys-CTT-1-1 Sc: 89.2 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCGTTAGCTCAGTTGGTAGAGCAGGAGACTTTTAATCTCTTG...........GtCGTAGGTTCGAATCCTACACGACCCACCA tRNA-Lys-TTT-1-1 Sc: 91.1
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTACGTAGCTCAGCTGGTtAGAGCGCGGCACTCATAATGCTGAG...........GtCGGTGGTTCAAGTCCACCCGTAGCCACCA tRNA-Met-CAT-1-1 Sc: 83.3
fMet tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... TGCGGGGTGGAGCAGTCtGGCAGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGCCCCCGCTACCA tRNA-fMet-CAT-1-1 Sc: 75.7
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCAGGTAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGT...........GtCGGCGGTTCGATTCCGTCCCTGGCCACCA tRNA-Phe-GAA-1-1 Sc: 85.1
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCGTAGCGCAGCCtGGTAGCGCACCTGCATGGGGTGCAGGTG...........GtCGGAGGTTCAAATCCTCTCGCCCCGACCA tRNA-Pro-GGG-1-1 Sc: 75.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGAGTGTAGCTCAGCCtGGTAGAGCACTGCCTTCGGGAGGCAGGG...........GtCGAAGGTTCGAATCCTTTCACTCCGACCA tRNA-Pro-CGG-1-1 Sc: 81.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGTATAGCGCAGTCtGGTAGCGCGCCTGCTTTGGGAGCAGGAT...........GtCGGGGGTTCGAATCCCTCTACCCCGACCA tRNA-Pro-TGG-1-1 Sc: 81.9
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCCGAGTGGTtgA.AGGCGCACGCCTGGAAAGTGTGT.ATACGGTAAC.CCCGTAT.CGAGGGTTCGAATCCCTC..CCTCTCCGCCA tRNA-Ser-GGA-1-1 Sc: 85.8 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGCCGGAGTGGTcgA.ACGGGGCGGTCTCGAAAACCGTT.GTACTCGCAA..GAGTAC.CGTGGGTTCGAATCCCAC..CCTCTCCGCCA tRNA-Ser-CGA-1-1 Sc: 87.7 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<..>>>>>........<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGGTGGCAGAGCGGTtgA.TTGCACCGGTCTTGAAAACCGGAGACGGG.GTAA...CCCGTTCGTGGGTTCGAATCCCAC..CCTCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 89.8 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGGCCGAGTGGTcgA.AGGCGCTCCCCTGCTAAGGGAGT.ATGGGTCAAAa.GCCCAT.CGAGGGTTCGAATCCCTC..TCTCTCCGCCA tRNA-Ser-GCT-1-1 Sc: 85.4
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCATATAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAG...........GtCACCGGTTCAAATCCGGTTATGGGCTCCA tRNA-Thr-GGT-1-1 Sc: 85.4 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGTTGTAGCTCAGTTGGTAGAGCAACTGATTCGTAATCAGTAG...........GtCGGAGGTTCGACTCCTCTCAACGGCACCA tRNA-Thr-CGT-1-1 Sc: 90.2 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGGCGTAGCTCAGTTGGTAGAGCGGCTGATTTGTAATCAGTAG...........GtCGCAGGTTCGACTCCTGTCGCCAGCTCCA tRNA-Thr-TGT-1-1 Sc: 89.7
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAG...........GtTGGGGGTTCGAGTCCCTCCTGGCCTGCCA tRNA-Trp-CCA-1-1 Sc: 87.2
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<.... GGAGGGGTTCCCGAGCGGTcaA.AGGGGACAGACTGTAAATCTGTTGGCA.......cTGCCTtCGAAGGTTCGAATCCTTC.CCCCTCCACCA tRNA-Tyr-GTA-1-1 Sc: 77.7
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCGCGTAGCTCAGCTGGTtA.GAGCACCACCTTGACATGGTGGGG...........GtCGTTGGTTCGAGTCCAATCGCGCCTACCA tRNA-Val-GAC-1-1 Sc: 83.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGGTTAGCTCAGC.GGT.A.GAGCACTGCCTTCACACGGCAGGG...........GtCAGTGGTTCGATCCCACTACCGCCCACCA tRNA-Val-CAC-1-1 Sc: 80.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTGCTTAGCTCAGCTGGT.A.GAGCGTCGCCCTTACAAGGCGAAT...........GtCGGGGGTTCGATCCCCTCAGCACCCACCA tRNA-Val-TAC-1-1 Sc: 85.0
SeC tRNAs
Sup tRNAs