Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATGTAGCTCAGTTGGTtAGAGCGCTTGCATGGCATGCAAGAG...........GtCAGGGGTTCGATTCCCCTCATCTCCA... tRNA-Ala-GGC-1-1 Sc: 77.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGAATTAGCTCAGCTGGT.AGAGCGTTTGGTTCGCAATCAAGAG...........GtCAGGGGTTCGACTCCCCTATTCTCCA... tRNA-Ala-CGC-1-1 Sc: 71.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGGTATAGCTCAACTGGCtAGAGCGACGGCTTTGCAGGTCGTAG...........GtCAGGGGTTCGAGTCCCCTTATCTCCA... tRNA-Ala-TGC-1-1 Sc: 66.5
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GAGACTATAGCTCAGCTGGAtA.GAGTGTCAGATTGCGGATCTGAAG...........GtCGACGGTTCGAATCCGCCTAGTCTCA... tRNA-Arg-GCG-1-1 Sc: 63.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAAGATTAGCTCATTCGGAtA.GAGCGTTGGCCTCCGGAGCCAAAG...........GcGGTGGGTTCAAATCCCGCATCTTCCA... tRNA-Arg-CCG-1-1 Sc: 69.8 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCTCGTAGCTCAGGTGGAtA.GAGCAACAGACTTCGAATCTGTAG...........GtCGCACGTTCAAGTCGTGTCGGGCGCA... tRNA-Arg-TCG-1-1 Sc: 69.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GATCCATTAGCTCAGC.GGAgA.GAGCGGCCGCCTCCTAAGCGGCAG...........GtCGGACGTTCAAGTCGTCCATGGATCA... tRNA-Arg-CCT-1-1 Sc: 66.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGATCATAGCTCACCCGGAtA.GAGCGACTGCCTTCTAAGCAGTAG...........GgAGGGGGTTCGAGTCCCTCTGGTCCCA... tRNA-Arg-TCT-1-1 Sc: 67.6
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCCCTGTAGCTCAGTTGGTAGAGCAAATGGCTGTTAACCATTGG...........GtCCGTGGTTCGAGCCCGCGCGGGGGAG... tRNA-Asn-GTT-1-1 Sc: 64.8
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>.>>.......<<.<<................>>>>>.......<<<<<<<<<<<<.... GGGGGCGTAGCGAAGTTGGTtATCGCGCCAGCCTGTCACGCCGGAG...........AtCGCGGGTTCGAGCCCCGTCGCTCCCG... tRNA-Asp-GTC-1-1 Sc: 61.4
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGCCGTGCCCAAGTGGTA.AGGGAGAGGTCTGCAAAACCTTTA...........TgCATCAGTTCGATTCTGATCGGCGCCT... tRNA-Cys-GCA-1-1 Sc: 67.2
Gln tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<.<<<<<<<.... TCCCTGGTTGTGTAATGGTA.GCACCGCAGATTCTGGTTCTGTGT..............GTGGGGGTTCGAGTCCTCC.CTAGGGAA... tRNA-Gln-CTG-1-1 Sc: 46.6 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<.<<<<<<<.... TGGGACGTCGGCAAGTGGTA.AGCCAACGGTTTTTGGTACCGTCATTC............CGTAGGTTCGAATCCTAC.CGTCCCAG... tRNA-Gln-TTG-1-1 Sc: 58.9
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTCCCTTCGTCTATCGGTtA.GGACATGAGATTCTCAATCTCAAA...........AGACGGGTTCAATTCCCGTAGGGACTA... tRNA-Glu-CTC-1-1 Sc: 52.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGTCCCTTCGTCTATCGGTtA.GGACATGAGATTTTCAATCTCAGA...........AGACGGGTTCAATTCCCGTAGGGACTA... tRNA-Glu-TTC-1-1 Sc: 51.6
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGTGGT.A.GAGCGCCACCTTGCCAAGGTGGAA...........GtCGCGGGTTCGATCCCCGTTTCCCGCT... tRNA-Gly-GCC-1-1 Sc: 81.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGATGTTGTATAACGGCtA.TTACCCCAGCCTTCCAAGCTGGAG...........A.CGTGGGTTCGACTCCCATCATCCGCT... tRNA-Gly-TCC-1-1 Sc: 64.2
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGGTGTAGTTCAGTGGTA.GAGCGCCAGATTGTGGATCTGGTT...........GtCGTGGGTTCGAATCCCATCACTCACC... tRNA-His-GTG-1-1 Sc: 64.2
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTTGTAGCTCAGTTGGTtAGAGCACTTCTCTGATAAGGAAGGG...........GtCATTAGTTCAACTCTAATCAAGCCCA... tRNA-Ile-GAT-1-1 Sc: 70.9
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..........<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGCGGTGGTGGAAGTGGTaTACACGCTAGCTCGAGGTGCTAGT.GCC..GTAA....GGCTTGCTGGTTCAAGTCCAGT.CCGCCGCA... tRNA-Leu-GAG-1-1 Sc: 55.3 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..........<<<..>>>>>.......<<<<<.<<<<<<<.... GCCTCGATGGTGGAATTGGCaGACACGCTAGCTTCAGGTGCTAGT.GCCT.TCAC...CGGCGTGGGAGTTCAAGTCTCCC.TCGAGGCA... tRNA-Leu-CAG-1-1 Sc: 55.3 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..........<<<..>>>>>.......<<<<<.<<<<<<<.... GCGAGAGTGGTGGAATCGGCaGACACGCTAGACTTAGGATCTAGT.GCC..TCT.....GGCATGAGGGTTCAAGTCCCTC.CTCTCGCA... tRNA-Leu-TAG-1-1 Sc: 60.7 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..........<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGACGTGGTGAAACTGGCaGACACGACAGACTCAAAATCTGTTGGGG..TAAC....CCCGTAAGGGTTCAAGTCCCTT.CGTCGGCA... tRNA-Leu-CAA-1-1 Sc: 70.2 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>>......<<<<<..>>>>>.......<<<<<.<<<<<<<.... GCTGGAGTGATGGAATTGGTaGACATCAGGGACTTAAAATCCCTT.GACCGGCAG..CGGTCGTACGAGTTCAAGTCTCGT.CTCCAGCA... tRNA-Leu-TAA-1-1 Sc: 64.6
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCATTAGCTCAGTTGGTAGAGCAACAGACTCTTAATCTGTGG...........GtCGCAGGTTCGAAGCCTGCATGGCTCA... tRNA-Lys-CTT-1-1 Sc: 77.9 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTATTAGCTCAGCTGGTAGAGCAACGCCCTTTTAAGGCGTGG...........GtCGATGGTTCGAATCCATCATGGCTCA... tRNA-Lys-TTT-1-1 Sc: 78.3
Met/Ile2 tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCAGGGTGGAGCAGTTGGC.AGCTCGTCGGGCTCATAACCCGGAG...........GcCGGAGGTTCGAGTCCTCTCCCTGCTA... tRNA-fMet-CAT-1-1 Sc: 70.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGCATAGCTCAGTTGGT.AGAGCACGCGGCTCATATCCGCGCT...........GtCATAGGTTCAATCCCTATTGCCGCTA... tRNA-Met-CAT-1-1 Sc: 65.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.... GGGCCTATAGCTCAGTTGGTtAGAGCAGCGGACTCATAATCCGCGG...........GtCGCCGGTTCAAGTCCAGCTGGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 73.3
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGTTGTAGCTCAGTCGGTAGAGCAAAGGACTGAAAATCCTTGT...........GtCGACAGTTCGATTCTGTCCGACGGCA... tRNA-Phe-GAA-1-1 Sc: 74.6
Pro tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGCAATGGCGCAGTAGGTtA.GCGTACAAGTCTGGGGGACTTGGG...........GtCCCCGGTTCGAGTCCGGGTTGCCCGA... tRNA-Pro-GGG-1-1 Sc: 61.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGTGGTAGCGCAGT.GGT.A.GCGCGCTCGGTTCGGGACTGAGAG...........GtCGGGGGTTCAAATCCCCCTCGCCCGACCA tRNA-Pro-CGG-1-1 Sc: 76.2 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... CGGGACGTGGCCTAGG.GGCtA.GGGCACCCGGTTTGGGACCGGAAG...........AtCGAGGGTTCAAATCCCTCCGTCCCGA... tRNA-Pro-TGG-1-1 Sc: 64.8
SeC tRNAs
Ser tRNAs
>>>>>>>...>>............<<..>>>>>.......<<<<<.....>>.............<<.....>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGTCCGAGTGGCcgA.AGGTACACGATTGGAAGTCGTGTG.TGCCC..CAAA.....AGGGTAcCGAGGGTTCGAATCCCTC..TCTCTCCG... tRNA-Ser-GGA-1-1 Sc: 61.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>>>>>>.......<<<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGCGAGAGCGGTcgA.ATCGGACGGTCTCGAAAACCGTA..GCGCTCTTGCA...AGGGCGC..CGAGGGTTCGAATCCCTC..TCTCTCCG... tRNA-Ser-CGA-1-1 Sc: 74.2 >>>>>>>..>>>............<<<..>>>>.......<<<<....>>>>.............<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGTGGTGGCCGAGTGGTtgA.AGGCGACGGTCTTGAAAACCGCTG.TGTC...GCAA......GGCAC.CGGGGGTTCGAATCCCCC..CTGCTCCG... tRNA-Ser-TGA-1-1 Sc: 67.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>>>.............<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGCGGTGCGAGAGTGGTcgA.ATCGGGCTCCCTGCTAAGGAGTTGcATTCAT.........CCGAGTGcCGGGGGTTCGAATCCCCC..CTGCTCCG... tRNA-Ser-GCT-1-1 Sc: 61.7
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTTCTGTAGCTCAGTTGGC..AGAGCGCAACCATGGTAAGGTTGAG...........GtCAGCGGTTCAATCCCGCTCGGAAGCT... tRNA-Thr-GGT-1-1 Sc: 64.1 >>>>>>>..>>>>..........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAACTTAGCTCACCTGGC..AGAGCAGCACCCTCGTAACGTGCAG...........GtACCCGGTTCGAGCCCGGGAGTTGGCT... tRNA-Thr-CGT-1-1 Sc: 57.1 >>>>>>>..>>>>..........<<<<.>>.>>.......<<.<<................>>>>>.......<<<<<<<<<<<<.... GCCAACTTAGCTCAGTCGGTctAGAGCGCGTGATTTGTAATCTCGAG...........GtCTAGGGTTCGAATCCCTAAGTTGGCT... tRNA-Thr-TGT-1-1 Sc: 68.3
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCAGTAGCTCTAATGGCAGAGCGTCGGTCTCCAAAACCGAAT...........GtTGAAGGTTCGAGTCCTTCCTGGCCTG... tRNA-Trp-CCA-1-1 Sc: 66.5
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>.............<...>>>>>.......<<<<<<<<<<<<.... GGGGAGTTTCCCGAGTGGTcaA.AGGGAGCAGACTGTAAATCTGTTGGCGT.......TGTCTtCCAAGGTTCGAATCCTTGACTCCCCA... tRNA-Tyr-GTA-1-1 Sc: 65.5
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCAATTAGCTCAGCTGGTtA.GAGTACAAGCATGACACGCTTGGG...........GtCACTGGTTCGATCCCAGTATTGCCCA... tRNA-Val-GAC-1-1 Sc: 67.7 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACGATTAACTCAGT.GGT.A.GAGTGTTACCTTCACACGGTAGAA...........GtCATCGGTTCAAGTCCGGTATCGTCCA... tRNA-Val-CAC-1-1 Sc: 65.5 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCTTAGCTCAGC.GGGcA.GAGCGCTTGGTTTACACCCAAGAG...........GtCAGCGGTTCAAACCCGTTAGCGCCCA... tRNA-Val-TAC-1-1 Sc: 70.1