Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGACGTAGCTCAATTGATAGAGCACCTGATTTGCACTCAGGAG...........GtCGTGGGTTTGACCCCCATCGTCTCCACCA tRNA-Ala-TGC-1-1 Sc: 73.2
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCATCCTTAGCTCAATTGGAcAGAGCGTCTGGCTACGGACCAGAAG...........GtTAAGGGTTCGACTCCTTTAGGGTGCGCCA tRNA-Arg-ACG-1-1 Sc: 74.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCACCCATAGTTCAATTGGTtAGAATATATGCCTTCGAAGCATAGG...........GtTAGGAGTTCGAGTCTCTTTGGGTGCGCCA tRNA-Arg-TCG-1-1 Sc: 77.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.................>>>>.......<<<<.<<<<<<<.... GCACCTGTAGCTCAGTTGGAtAGAGCATACGCCTTCTAAGCGTACG...........GtCTGGGGTTCGAATCCCTTCAGGTGCGCCA tRNA-Arg-TCT-1-1 Sc: 78.7
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTACATAGCTCAGCGGTA.GAGCAACCGGCTGTTAACCGGTTG...........GtCGTAGGTTCGATCCCTACTGTAGCCGCCA tRNA-Asn-GTT-1-1 Sc: 83.5
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTTCTGTGGTGTAGTGATtA.ACATGCCTCTCTGTCACAGAGGAG...........AtCGCGGGTTTGACTCCCGTCAGGACCGCCA tRNA-Asp-GTC-1-1 Sc: 58.3
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTGCCATAGCCAAGTGGTA.AGGTCAGGAGCTGCAACCTCCTTA...........TtCGTCAGTTCGAATCTGACTGGCACCTCCA tRNA-Cys-GCA-1-1 Sc: 62.3
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGCCTGTAGCCAAGAGGTA.AGGCAGAAGATTTTGATTCTTCCA...........TgCGTAGGTTCGATCCCTACCAGGCCAGCCA tRNA-Gln-TTG-1-1 Sc: 65.9
Glu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCTGTTGGTGAAGTGACtgA.ACACACACGCCTTTCACGCGTGCA...........TtCACGGGTTTGAATCCCGTACAGGTCACCA tRNA-Glu-TTC-1-1 Sc: 59.0
Gly tRNAs
>>>>>>>..>>>>........<<<<.>.>>>.......<<<.<...............>>>>>.......<<<<<<<<<<<<.... GCAGATGTAGTTCAATGGTA.GAACGCAACCTTGCCAAGGTCGAG...........ACGCGAGTTCGATTCTCGTCATCTGCTCCA tRNA-Gly-GCC-1-1 Sc: 72.5 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAATGGTA.GAACTATAGCCTTCCAAGCTATTA...........GTGTGGGTTCGATTCCCATCACCCGCTCCA tRNA-Gly-TCC-1-1 Sc: 79.9
His tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGTTATGGTGAAGTTGGTtAACACGCCTGATTGTGGCTCAGGTATT.........TtCGCGGGTTCGAGTCCCGTTAATCGCCCCA tRNA-His-GTG-1-1 Sc: 67.2
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAAGTATAGCTCAGTT.GGTtAGAGCACACCCCTGATAAGGGTGAG...........GtCGGTGGTTCGAGCCCACTTATTTCCACCA tRNA-Ile-GAT-1-1 Sc: 78.5
Leu tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.>.........<.<<<..>>>>>.......<<<<<..<<<<<<<.... GCGCTTGTGGCGGAATGGCaG.ACGCGCTAGACTTAGGATCTAGT.ACTTT.........GCGGTGTAAGAGTTCAAGTCTCTT..CAAGCGCACCA tRNA-Leu-TAG-1-1 Sc: 63.9 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>.............<<...>>>>>.......<<<<<..<<<<<<<.... GCTCAAGTGGCGAAATGGCaG.ACGCAGTTGACTCAAAATCAACCGAGAA...........ATCA.TAAGGGTTCGAGTCCCTT..CTTGAGCACCA tRNA-Leu-CAA-1-1 Sc: 66.2 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>...........<<<<..>>>>>.......<<<<<..<<<<<<<.... GCTGGAGTGGCGGAATGGTaG.ACGCACTGGACTTAAAATCCAGT.GACT.TCAC......GGTCGTGAGGGTTCAAGTCCCTC..TTCCAGCACCA tRNA-Leu-TAA-1-1 Sc: 74.9
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GCTCTGTTAGCTCAGTAGGTA.GAGCAACTGACTCTTAATCAGTGG...........GtCGCGGGTTCGAAACCCTCACAGAGCACCA tRNA-Lys-CTT-1-1 Sc: 72.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCATTAGCTCAGT.GGTA.GAGCATTTCACTTTTAATGAAGGG...........GtCAAAGGTTCGAAACCTTTATGGGGCACCA tRNA-Lys-TTT-1-1 Sc: 75.6
Met/Ile2 tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTGGATAGCTCAACT.GGTtAGAGCGCTCGGTTCATACCCGGGAG...........GtTCAGAGTTCAAATCTCTGTCCAGCCACCA tRNA-Met-CAT-1-1 Sc: 75.1 .>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGATAGAGCAGCTtGGT.AGCTCGTCAGGCTCATAATCTGGAG...........GtCGGGGGTTCAAATCCCTCTCCCGCAACCA tRNA-fMet-CAT-1-1 Sc: 71.8 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCTTCTATAGCTCAATTtGGTtAGAGCCCCCGACTCATAATCGGTTG...........GtTACAGGTTCAAGTCCTGTTAGAAGCACCA tRNA-Ile2-CAT-1-1 Sc: 72.5
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTTTCGTAGCTCAGTCGGTAGAGCAACGGACTGAAGATCCGTGT...........GtCGACAGTTCGATTCTGTCCGAAACCACCA tRNA-Phe-GAA-1-1 Sc: 79.0
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGAAGTAGCACAGCTtGGTAGTGCACTTGGTTTGGGACCAAGGG...........GtCGCAGGTTCGAATCCTGTCTTCCCGACCA tRNA-Pro-TGG-1-1 Sc: 83.2
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>..........<<<<<..>>>>>.......<<<<<.<<<<<<<.... GGAGAAATACCCAAGTCcGGCtgA.AGGGATCAGTCTTGAAAACTGAGAGGCGAT.GCAA.....GTCGCGCGGGGGTTCGAATCCCTC.TTTCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 81.0 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>..........<<<<<..>>>>>.......<<<<<.<<<<<<<.... GGAAACATACTCAAGT..GGTt.A.AGAGGGCACCCTGCTAAGGTGTTAGGTCGTT....c...TGCGGCGCGTGGGTTCGAATCCCAC.TGTTTCCGCCA tRNA-Ser-GCT-1-1 Sc: 78.5
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGACTTAGCTCAATAGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGTGGGTTCAATTCCTATAGTCGGCACCA tRNA-Thr-TGT-1-1 Sc: 82.3
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AAGGGTATAGTTCAATTGGTAGAACAGCAGACTCCAAATCTGCGT...........GtTGCGGGTTCGAGTCCTGTTACCCTTGCCA tRNA-Trp-CCA-1-1 Sc: 77.3
Tyr tRNAs
>>>>>>>..>>>............<<<..>>>>.......<<<<..>>...........<<...>>>>>.......<<<<<.<<<<<<<.... GGACAGATAGCGAAGTGGCcaA.ACGCATCCGGCTGTAACCCGGCTCCGA.......GAGGTtCGTAGGTTCGAATCCTAC.TCTGTCCACCA tRNA-Tyr-GTA-1-1 Sc: 67.4
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGTGCTAGCTCAGTTGGGAGAGCATTTGCCTTACAAGCAAAGG...........GtCAGGGGTTCGAGTCCCTTGCACTCCACCA tRNA-Val-TAC-1-1 Sc: 85.0