Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGCTGGGA.GAGCGCTTGCATGGCATGCAAGAG...........GtCAGGGGTTCAATCCCCCTTAGCTCCA... tRNA-Ala-GGC-1-1 Sc: 68.2 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCATAGTTAAAC.GGGA.GAATGTATCGTTCGCAACGATAAG...........A.TGCGGGTTCAATTCCCGCTGGCTCCA... tRNA-Ala-CGC-1-1 Sc: 56.2 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GGGGATATAGCTCAGCTGGGA.GAGCGCCTGCTTTGCAAGCAGGAG...........GtCGTCGGTTCAAATCCGTCTATCTCCA... tRNA-Ala-TGC-1-1 Sc: 76.2
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCCCATAGCTCAATCGGAtA.GAGCATTTGACTACGAATCAAAAG...........GtTAGAGGTTCAACTCCTCTTGGGCGCG... tRNA-Arg-ACG-1-1 Sc: 71.7 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGCTCGTAGCTTAAA.GGAtA.GAGCGCCGGCCTCCGGAGCCGGTA...........A.TTCCGGTTCAAGTCCGGACGAGCGTA... tRNA-Arg-CCG-1-1 Sc: 57.7 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCCTGATAGCTCAATTGGAtA.GAGCAGATCCGTCCTAAGGATAAG...........AtTGGAGGTTCAACTCCTCTTCAGGGCG... tRNA-Arg-CCT-1-1 Sc: 56.4 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCTCCGTAGCTCAACTGGAtA.GAGCAACTGCCTTCTAAGCAGTAG...........GtTGCGTGTTCAACTCACGCCGGAGACG... tRNA-Arg-TCT-1-1 Sc: 67.9
Asn tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCGACGTAGCTCAATGGTG.GAGCAATCGGCTGTTAACCGATCG...........GcTGCTGGTTCGAGTCCAGCCGTCGGAG... tRNA-Asn-GTT-1-1 Sc: 72.2
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGATGTGGTGTAGCCtGGTtAACACACTGCCCTGTCAAGGCAGAG...........AtCGCGGGTTCAAATCCCGTCATCCCCG... tRNA-Asp-GTC-1-1 Sc: 75.1
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTGCGGTACCCAAGTGGTA.AGGGAGCAGTCTGCAAAACTGTTA...........TtCGCCGGTTCAATTCCGGCCCGCACCT... tRNA-Cys-GCA-1-1 Sc: 71.7
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGCCATCGTCTAGCGGTtcA.GGACATCGCCCTCTCAAGGCGGAG...........AtCACGGGTTCAAATCCCGTTGGCAGCG... tRNA-Glu-CTC-1-1 Sc: 66.6 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTCCCATCGTCTAGGGGTctA.GGACACAGGATTTTCAATCCTGCG...........A.CACGAGTTCAAATCTCGTTGGGAGCG... tRNA-Glu-TTC-1-1 Sc: 61.2
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGCCCGATAGTGTAATTGGTA.ACACGTCTGCCTCTGGAGCAGAAG...........TcTCCTGGTTCGAGTCCAGGTCGGGCAG... tRNA-Gln-CTG-1-1 Sc: 65.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCGGGATTGTGTAAT.GGTA.GCACAAGGGATTTTGGATCCCTTT...........G.TCTAGGTTCGAATCCTAGTCCCGGAG... tRNA-Gln-TTG-1-1 Sc: 56.9
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGTGTAGTTCAGTGGTA.GAACGTCTCGTTGCCAACGAGAAG...........GtCGTGGGTTCAAGTCCCATCGCCCGCT... tRNA-Gly-GCC-1-1 Sc: 78.7 >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGTATAGTGGTA.AAACCCCGGCTTCCCAAGTCGGAG...........A.TGTGGGTTCGATTCCCATCGCCCGCT... tRNA-Gly-CCC-1-1 Sc: 62.8 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCGGGAGTAGCACAATGGTA.GTGCTCCAGCCTTCCAAGCTGTCC...........A.CGCGGGTTCGATTCCCGTCTCCCGCT... tRNA-Gly-TCC-1-1 Sc: 66.1
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGTTGTAGCTCAACTGGTtAGAGCGTCGGTTTGTGGAGCCGAAG...........GcTGCGGGTTCAAGTCCCGTCAGCCACC... tRNA-His-GTG-1-1 Sc: 65.1
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAGTTAGTcAGAGCGCACCCCTGATAAGGGTGAG...........GtCTGTGGTGCAACTCCACATAGGCCCA... tRNA-Ile-GAT-1-1 Sc: 59.7
Ile2 tRNAs
>>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAGTTGGTtAGAGCACTCGACTCATAATCGAATG...........GtCGTAGGTTCAAGTCCTACCAGGCCCA... tRNA-Ile2-CAT-1-1 Sc: 81.9
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>..............<<....>>>>>.......<<<<<.<<<<<<<.... GCTGGGGTGGCGGAACTGGCaT.ACGCGCACGTTTGAGGGGCGTGT.CCTTG........ACTGG.A.TGCGGGTTCAAGTCCCGC.CCTCAGCA... tRNA-Leu-GAG-1-1 Sc: 42.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>............<<<....>>>>>.......<<<<<.<<<<<<<.... GCTGAGGTGGTGGAAC.GGCaG.ACACGCAGGTCTCAGAAGCCTGTCCCC..GAAA......GGGCGgTAGGGGTTCGAATCCCCT.CCTCAGCA... tRNA-Leu-CAG-1-1 Sc: 60.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>.>............<.<<...>>>>>.......<<<<<.<<<<<<<.... GCGGACGTGGCGGAATTGGCaG.ACGCGTATGGCTTAGGACCATATACCAC..........ATAGTA.TGGGGGTTCAAGTCCCTC.CGTCCGCA... tRNA-Leu-TAG-1-1 Sc: 58.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>..........<<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGTGGAATTGGCaG.ACACGTGAGACTCAAAATCTCAAGTTGC.TTAG.....GCGGCG.TGCGGGTTCAAGTCCCGC.CCTCGGCA... tRNA-Leu-CAA-1-1 Sc: 67.1 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>..........<<<<<...>>>>>.......<<<<<.<<<<<<<.... GGGCGGATGGCGGAACTGGCaG.ACGCACAGGACTTAAAATCCTGAGACTC.GCAA.....GAGTCG.TGAGGGTTCAATTCCCTC.TCCGCCCA... tRNA-Leu-TAA-1-1 Sc: 74.4
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGTTGCTAGCTCAATTGGTAGAGCAAACGACTCTTAATCGTTAG...........AtTATAGGTTCGATTCCTATGCAGCGCA... tRNA-Lys-CTT-1-1 Sc: 68.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGCTGGCAGAGCACCTCACTTTTAATGAGGTT...........GtCGTGCGTTCGAACCGCACCGGGCTCA... tRNA-Lys-TTT-1-1 Sc: 72.9
Met tRNAs
>>>>>>>..>>>>........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGCGTAGCTCAGGGGTA.GAGCAGAGGACTCATAAGCCTTTG...........GtCGTAGGTTCAATTCCTACCGTCGCCA... tRNA-Met-CAT-1-1 Sc: 67.3
fMet tRNAs
.>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTCcGGTAGCTCGTCAGGCTCATAACCTGAAG...........GcCGCAGGTTCAAATCCTGCCCCCGCAA... tRNA-fMet-CAT-1-1 Sc: 74.9
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGAGGTAGCTCAGTTGGTAGAGCACAGGTCTGAAAAACCTGGT...........GtCGACAGTTCAATTCTGTCCCTCAGCA... tRNA-Phe-GAA-1-1 Sc: 76.8
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGGCGTAGCGCAGTTGGCtAGCGCACTCCCTTGGGGTGGGAGAG...........GtCGCTGGTTCAAGTCCAGTCGCCCCGA... tRNA-Pro-GGG-1-1 Sc: 71.3 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGAAGTAGCGTAATTGGCtATCGCGCCTGCTTTGGGAGCAGGAG...........GtTGTGGGTTCAAGTCCCGCCTTCCCGA... tRNA-Pro-TGG-1-1 Sc: 70.6
Ser tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGGCCGAGT.GGTttA.AGGCGCAGTCCTGGAAAGACTGT.TTATTC.GAAA.GGGTAA.CTAGGGTTCGAATCCCTA..TCTCTCCG... tRNA-Ser-GGA-1-1 Sc: 66.9 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAAGTAGCCGAGCTGGTttA.AGGCGTCAGTCTCGAAAACTGAT.ATACGG.GAAA.CCGTAT.CGAGGGTTCGAATCCCTC..CTTCTCCG... tRNA-Ser-CGA-1-1 Sc: 89.7 GGAGAAGTAGCCGAGCTGGTttA.AGGCGTCAGTCTCGAAAACTGAT.ATACGG.GAAA.CCGTAT.CGAGGGTTCGAATCCCTC..CTTCTCCG... tRNA-Ser-CGA-1-2 Sc: 89.7 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGGCCGAGC.GGTttA.AGGCGATAGTCTTGAAAACTATT.ATAGGG.GAAA.CTCTAT.CGGGGGTTCAAATCCCTC..TCTCTCCGCCA tRNA-Ser-TGA-1-1 Sc: 88.0 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<..>>>>>>>....<<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGGGTCGCATAGCAGGTctA.GTGCGCTGGTTTGCTAAACCGGTGTACGGATGAAAATCCGTACCGAGAGTTCGAATCTCTC..CCCCTCCG... tRNA-Ser-GCT-1-1 Sc: 74.0
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GCCGAGGTGGCTCAGT.GGTA.GAGCACCTCCTTGGTAAGGAGGTG...........GtCGCGGGTTCGATTCCCACCCTCGGCT... tRNA-Thr-GGT-1-1 Sc: 77.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGATGTAGCTCAGCTGGCA.GAGCAATTGCTTCGTAAGCAATGG...........GtCAGAGGTTCAAATCCTCTCATCGGCT... tRNA-Thr-CGT-1-1 Sc: 78.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGACGTAGCTCAGCTGGTA.GAGCAGCGGTTTTGTAAACCGCGG...........GtCATAGGTTCAATTCCTATCGTCGGCT... tRNA-Thr-TGT-1-1 Sc: 79.8
Trp tRNAs
>>>>>>>..>>.>........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<.... GGGGGTATAAGCTAATGGTA.AACTGCTGGTCTCCAAAACCAGC...........TtTGGAGGTTCAAATCCTTC.TGCCCCCG... tRNA-Trp-CCA-1-1 Sc: 58.8
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<.... GGGGGTGTGGCAGAGCGGTctA.ATGCACCAGACTGTAAATCTGGCGGGCT......TGCCCTtCGGTGGTTCAAATCCATC.CGCCCCCA... tRNA-Tyr-GTA-1-1 Sc: 70.9
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGTTAGCTCAGTTGGTtA.GAGTACTTCCTTGACATGGAAGGG...........GtCGGAAGTTCAAGTCTTCTGCCGGGCA... tRNA-Val-GAC-1-1 Sc: 66.0 >.>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<.<.... GGGTAGTTAGCTCAGT.GGA.A.GAGCACTCGTTTCACACGCGAGTG...........GtGGCAGGTTCGAACCCTGCACTACACA... tRNA-Val-CAC-1-1 Sc: 57.3 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCAGTTAGCTCAGCTGGA.A.GAGCATTTCCCTTACAAGGAAGAG...........GtCGCAGGTTCAATTCCTGCACTGCCCA... tRNA-Val-TAC-1-1 Sc: 78.4
SeC tRNAs
Sup tRNAs