tRNA Gene Summary

Overview
High confidence set 402
tRNAs decoding standard 20 AA 401
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 3
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 12670
Secondary filter (low feature scores, possible rep. element) 87

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 33)
Pro AGG
1
Arg CCT
5
Leu CAA
7
Ile TAT
2
Met CAT
5
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
13
GGC
 
CGC
6
TGC
14
33
GlyACC
 
GCC
12
CCC
2
TCC
12
26
ProAGG
16
GGG
 
CGG
3
TGG
38
57
ThrAGT
5
GGT
 
CGT
8
TGT
3
16
ValAAC
15
GAC
 
CAC
12
TAC
2
29
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
4
TGA
3
ACT
 
GCT
12
 
 
 
 
28
ArgACG
9
GCG
 
CCG
2
TCG
2
 
 
 
 
CCT
5
TCT
5
23
LeuAAG
6
GAG
 
CAG
10
TAG
7
 
 
 
 
CAA
7
TAA
5
35
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
8
 
 
 
 
8
AsnATT
 
GTT
10
 
 
 
 
10
Lys 
 
 
 
CTT
15
TTT
8
23
AspATC
 
GTC
23
 
 
 
 
23
Glu 
 
 
 
CTC
5
TTC
6
11
HisATG
 
GTG
4
 
 
 
 
4
Gln 
 
 
 
CTG
9
TTG
10
19
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
8
GAT
 
CAT
 
TAT
2
10
iMet/Met 
 
 
 
CAT
14/5
 
 
19
TyrATA
 
GTA
13
 
 
 
 
13
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
4
 
 
 
 
4
Trp 
 
 
 
CCA
10
 
 
10
SelCys 
 
 
 
 
 
TCA
1
1