tRNA Gene Summary

Overview
High confidence set 206
tRNAs decoding standard 20 AA 205
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 2
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 2785
Secondary filter (low feature scores, possible rep. element) 87

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 11)
Arg TCT
2
Leu CAA
2
Ile TAT
1
Tyr GTA
6
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
11
GGC
 
CGC
3
TGC
6
20
GlyACC
 
GCC
7
CCC
2
TCC
8
17
ProAGG
3
GGG
 
CGG
2
TGG
3
8
ThrAGT
4
GGT
 
CGT
1
TGT
3
8
ValAAC
5
GAC
 
CAC
3
TAC
2
10
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
5
GGA
 
CGA
2
TGA
1
ACT
 
GCT
5
 
 
 
 
13
ArgACG
4
GCG
 
CCG
1
TCG
3
 
 
 
 
CCT
3
TCT
3
14
LeuAAG
4
GAG
 
CAG
4
TAG
3
 
 
 
 
CAA
2
TAA
2
15
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
5
 
 
 
 
5
AsnATT
 
GTT
10
 
 
 
 
10
Lys 
 
 
 
CTT
5
TTT
5
10
AspATC
 
GTC
8
 
 
 
 
8
Glu 
 
 
 
CTC
5
TTC
7
12
HisATG
 
GTG
4
 
 
 
 
4
Gln 
 
 
 
CTG
5
TTG
3
8
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
6
GAT
 
CAT
 
TAT
1
7
iMet/Met 
 
 
 
CAT
7/4
 
 
11
TyrATA
 
GTA
6
 
 
 
 
6
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
12
 
 
 
 
12
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
1
1