tRNA Gene Summary

Overview
High confidence set 438
tRNAs decoding standard 20 AA 437
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 4
Secondary filter (low feature scores, possible rep. element) 7

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 28)
Leu CAA
3
Ile TAT
2
Tyr GTA
23
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
17
GGC
 
CGC
8
TGC
3
28
GlyACC
 
GCC
16
CCC
 
TCC
9
25
ProAGG
8
GGG
 
CGG
15
TGG
9
32
ThrAGT
8
GGT
 
CGT
5
TGT
2
15
ValAAC
32
GAC
 
CAC
29
TAC
3
64
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
6
GGA
 
CGA
8
TGA
2
ACT
 
GCT
6
 
 
 
 
22
ArgACG
11
GCG
 
CCG
 
TCG
8
 
 
 
 
CCT
2
TCT
2
23
LeuAAG
5
GAG
 
CAG
12
TAG
4
 
 
 
 
CAA
3
TAA
2
26
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
9
 
 
 
 
9
AsnATT
 
GTT
12
 
 
 
 
12
Lys 
 
 
 
CTT
17
TTT
7
24
AspATC
 
GTC
26
 
 
 
 
26
Glu 
 
 
 
CTC
15
TTC
11
26
HisATG
 
GTG
21
 
 
 
 
21
Gln 
 
 
 
CTG
11
TTG
4
15
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
13
GAT
 
CAT
 
TAT
2
15
iMet/Met 
 
 
 
CAT
11/8
 
 
19
TyrATA
 
GTA
23
 
 
 
 
23
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
5
 
 
 
 
5
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
1
1