tRNA Gene Summary

Overview
High confidence set 447
tRNAs decoding standard 20 AA 444
Selenocysteine tRNAs (TCA) 3
Notable atypical predictions  
Anticodon/isotype mismatch 25
Unexpected anticodons 3
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 492
Secondary filter (low feature scores, possible rep. element) 416

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 47)
Arg TCT
13
Leu CAA
6
Leu TAA
1
Ile TAT
19
Tyr GTA
8
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
9
GGC
 
CGC
7
TGC
13
29
GlyACC
 
GCC
26
CCC
11
TCC
8
45
ProAGG
4
GGG
 
CGG
7
TGG
7
18
ThrAGT
23
GGT
 
CGT
7
TGT
15
45
ValAAC
4
GAC
 
CAC
5
TAC
5
14
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
2
TGA
11
ACT
 
GCT
6
 
 
 
 
28
ArgACG
12
GCG
 
CCG
7
TCG
7
 
 
 
 
CCT
12
TCT
15
53
LeuAAG
3
GAG
 
CAG
4
TAG
6
 
 
 
 
CAA
6
TAA
11
30
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
10
 
 
 
 
10
AsnATT
 
GTT
7
 
 
 
 
7
Lys 
 
 
 
CTT
12
TTT
20
32
AspATC
 
GTC
9
 
 
 
 
9
Glu 
 
 
 
CTC
7
TTC
6
13
HisATG
 
GTG
7
 
 
 
 
7
Gln 
 
 
 
CTG
15
TTG
20
35
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
5
GAT
 
CAT
 
TAT
19
24
iMet/Met 
 
 
 
CAT
4/4
 
 
8
TyrATA
 
GTA
8
 
 
 
 
8
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
20
 
 
 
 
20
Trp 
 
 
 
CCA
9
 
 
9
SelCys 
 
 
 
 
 
TCA
2
3