tRNA Gene Summary

Overview
High confidence set 447
tRNAs decoding standard 20 AA 444
Selenocysteine tRNAs (TCA) 3
Notable atypical predictions  
Anticodon/isotype mismatch 25
Unexpected anticodons 3
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 492
Secondary filter (low feature scores, possible rep. element) 416

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 118)
Ala TGC
2
Gly GCC
1
Pro AGG
2
Pro TGG
1
Thr TGT
1
Val TAC
2
Ser GGA
1
Ser TGA
1
Ser ACT
1
Ser GCT
1
Arg TCT
25
Leu AAG
1
Leu CAG
2
Leu TAG
1
Leu CAA
14
Leu TAA
5
Asn ATT
1
Lys TTT
3
His ATG
2
Ile AAT
2
Ile TAT
29
Tyr GTA
18
Cys ACA
1
 
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
27
GGC
2
CGC
11
TGC
43
83
GlyACC
130
GCC
132
CCC
21
TCC
20
303
ProAGG
17
GGG
2
CGG
9
TGG
24
52
ThrAGT
46
GGT
2
CGT
7
TGT
35
90
ValAAC
9
GAC
2
CAC
10
TAC
9
30
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
26
GGA
1
CGA
4
TGA
22
ACT
22
GCT
46
 
 
 
 
121
ArgACG
14
GCG
1
CCG
7
TCG
10
 
 
 
 
CCT
21
TCT
37
90
LeuAAG
10
GAG
4
CAG
9
TAG
9
 
 
 
 
CAA
22
TAA
28
82
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
4
GAA
17
 
 
 
 
21
AsnATT
6
GTT
21
 
 
 
 
27
Lys 
 
 
 
CTT
38
TTT
44
82
AspATC
7
GTC
25
 
 
 
 
32
Glu 
 
 
 
CTC
19
TTC
12
31
HisATG
7
GTG
19
 
 
 
 
26
Gln 
 
 
 
CTG
25
TTG
34
59
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
49
GAT
6
CAT
 
TAT
35
90
iMet/Met 
 
 
 
CAT
7/16
 
 
23
TyrATA
5
GTA
20
 
 
 
 
25
Supres 
 
TCA
11
CTA
3
TTA
4
18
CysACA
14
GCA
32
 
 
 
 
46
Trp 
 
 
 
CCA
15
 
 
15
SelCys 
 
 
 
 
 
TCA
3
4