tRNA Gene Summary

Overview
High confidence set 580
tRNAs decoding standard 20 AA 580
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 3
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 8
Secondary filter (low feature scores, possible rep. element) 39
Tertiary filter (excessive isotype copies, possible rep. element) 11

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 72)
Met CAT
11
Tyr GTA
61
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
16
GGC
 
CGC
7
TGC
10
33
GlyACC
 
GCC
21
CCC
5
TCC
12
38
ProAGG
15
GGG
 
CGG
5
TGG
43
63
ThrAGT
10
GGT
 
CGT
5
TGT
8
23
ValAAC
14
GAC
 
CAC
8
TAC
7
29
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
35
GGA
 
CGA
4
TGA
7
ACT
 
GCT
11
 
 
 
 
57
ArgACG
9
GCG
 
CCG
4
TCG
6
 
 
 
 
CCT
7
TCT
9
35
LeuAAG
11
GAG
 
CAG
3
TAG
9
 
 
 
 
CAA
10
TAA
6
39
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
15
 
 
 
 
15
AsnATT
 
GTT
15
 
 
 
 
15
Lys 
 
 
 
CTT
17
TTT
13
30
AspATC
 
GTC
25
 
 
 
 
25
Glu 
 
 
 
CTC
13
TTC
10
23
HisATG
 
GTG
9
 
 
 
 
9
Gln 
 
 
 
CTG
9
TTG
7
16
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
17
GAT
 
CAT
 
TAT
5
22
iMet/Met 
 
 
 
CAT
9/11
 
 
20
TyrATA
 
GTA
61
 
 
 
 
61
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
14
 
 
 
 
14
Trp 
 
 
 
CCA
13
 
 
13
SelCys 
 
 
 
 
 
TCA
 
0