tRNA Gene Summary

Overview
High confidence set 476
tRNAs decoding standard 20 AA 476
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 21
Unexpected anticodons 3
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 14
Secondary filter (low feature scores, possible rep. element) 111

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 26)
Met CAT
14
Tyr GTA
12
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
19
GGC
 
CGC
11
TGC
9
39
GlyACC
 
GCC
20
CCC
9
TCC
8
37
ProAGG
13
GGG
 
CGG
8
TGG
8
29
ThrAGT
11
GGT
 
CGT
6
TGT
9
26
ValAAC
13
GAC
 
CAC
11
TAC
5
29
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
10
GGA
 
CGA
5
TGA
5
ACT
 
GCT
10
 
 
 
 
30
ArgACG
11
GCG
 
CCG
6
TCG
5
 
 
 
 
CCT
8
TCT
7
37
LeuAAG
14
GAG
 
CAG
8
TAG
5
 
 
 
 
CAA
6
TAA
4
37
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
13
 
 
 
 
13
AsnATT
 
GTT
13
 
 
 
 
13
Lys 
 
 
 
CTT
18
TTT
9
27
AspATC
 
GTC
19
 
 
 
 
19
Glu 
 
 
 
CTC
18
TTC
10
28
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
11
TTG
6
17
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
20
GAT
 
CAT
 
TAT
3
23
iMet/Met 
 
 
 
CAT
9/14
 
 
23
TyrATA
 
GTA
16
 
 
 
 
16
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
12
 
 
 
 
12
Trp 
 
 
 
CCA
11
 
 
11
SelCys 
 
 
 
 
 
TCA
 
0