tRNA Gene Summary

Overview
High confidence set 435
tRNAs decoding standard 20 AA 435
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 205
Secondary filter (low feature scores, possible rep. element) 47

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 21)
Leu CAA
5
Ile TAT
4
Tyr GTA
12
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
28
GGC
 
CGC
6
TGC
10
44
GlyACC
 
GCC
30
CCC
3
TCC
14
47
ProAGG
9
GGG
 
CGG
4
TGG
5
18
ThrAGT
9
GGT
 
CGT
3
TGT
4
16
ValAAC
9
GAC
 
CAC
7
TAC
6
22
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
4
TGA
7
ACT
 
GCT
9
 
 
 
 
29
ArgACG
8
GCG
 
CCG
 
TCG
8
 
 
 
 
CCT
6
TCT
3
25
LeuAAG
6
GAG
 
CAG
6
TAG
3
 
 
 
 
CAA
5
TAA
6
26
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
8
 
 
 
 
8
AsnATT
 
GTT
22
 
 
 
 
22
Lys 
 
 
 
CTT
10
TTT
9
19
AspATC
 
GTC
29
 
 
 
 
29
Glu 
 
 
 
CTC
11
TTC
14
25
HisATG
 
GTG
14
 
 
 
 
14
Gln 
 
 
 
CTG
8
TTG
7
15
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
17
GAT
 
CAT
 
TAT
4
21
iMet/Met 
 
 
 
CAT
12/10
 
 
22
TyrATA
 
GTA
12
 
 
 
 
12
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
11
 
 
 
 
11
Trp 
 
 
 
CCA
10
 
 
10
SelCys 
 
 
 
 
 
TCA
 
0