Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<<. GGGCGTGTGGCGTAGTTGGTAGCGCGTTCCCTTAGCATGGGAAAG...........GtCATGAGTTCGACTCTTATCTCGTCCA tRNA-Ala-AGC-1-1 Sc: 64.0 GGGCGTGTGGCGTAGTTGGTAGCGCGTTCCCTTAGCATGGGAAAG...........GtCATGAGTTCGACTCTTATCTCGTCCA tRNA-Ala-AGC-1-2 Sc: 64.0 GGGCGTGTGGCGTAGTTGGTAGCGCGTTCCCTTAGCATGGGAAAG...........GtCATGAGTTCGACTCTTATCTCGTCCA tRNA-Ala-AGC-1-3 Sc: 64.0 GGGCGTGTGGCGTAGTTGGTAGCGCGTTCCCTTAGCATGGGAAAG...........GtCATGAGTTCGACTCTTATCTCGTCCA tRNA-Ala-AGC-1-4 Sc: 64.0 GGGCGTGTGGCGTAGTTGGTAGCGCGTTCCCTTAGCATGGGAAAG...........GtCATGAGTTCGACTCTTATCTCGTCCA tRNA-Ala-AGC-1-5 Sc: 64.0 GGGCGTGTGGCGTAGTTGGTAGCGCGTTCCCTTAGCATGGGAAAG...........GtCATGAGTTCGACTCTTATCTCGTCCA tRNA-Ala-AGC-1-6 Sc: 64.0 GGGCGTGTGGCGTAGTTGGTAGCGCGTTCCCTTAGCATGGGAAAG...........GtCATGAGTTCGACTCTTATCTCGTCCA tRNA-Ala-AGC-1-7 Sc: 64.0 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<<. GGGCGTGTGGCGTAGTTGGTAGCGCGTTTGCCTTGCAAGCAAAAG...........GtCATGAGTTCGACTCTCATCTCGTCCA tRNA-Ala-TGC-1-1 Sc: 78.1 GGGCGTGTGGCGTAGTTGGTAGCGCGTTTGCCTTGCAAGCAAAAG...........GtCAAGAGTTCGACTCTCTTCTCGTCCA tRNA-Ala-TGC-2-1 Sc: 75.5
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. CTGGCTGTGGCCTAAT.GGT.A.AGGCACTTGACTACGGttaaattcttagatttagctcgcc.......ATCAAGGG...........AtTGCAGGTTCGAGTCCTGTCAGCCAGG tRNA-Arg-ACG-1-1 Sc: 57.3 CTGGCTGTGGCCTAAT.GGT.A.AGGCACTTGACTACGGttgaaaacaaattcggcttgcc.........ATCAAGGG...........AtTGCAGGTTCGAGTCCTGTCAGCCAGG tRNA-Arg-ACG-1-2 Sc: 57.3 >>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCCCTGGTGCAGTTGGTtA.GCATTTGGGCCTCCGGtgtcttgtgtaaattaataccatgacaagcaAGCTCAGG...........GtCGCGGGTTCGAGTCCCGCGGGGAGCT tRNA-Arg-CCG-1-1 Sc: 67.3 GCTCCCCTGGTGCAGTTGGTtA.GCATTTGGGCCTCCGGtgtcttgtgtaaattaataccatgacaagcaAGCTCAGG...........GtCGCGGGTTCGAGTCCCGCGGGGAGCT tRNA-Arg-CCG-1-2 Sc: 67.3 >>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCTGCTAGCTTAAA.GGT.A.AAGCGTTCCTCTCCTAttaaaaacacgagaacc..............AAGGAAAG...........AcTCCGGGTTCGAGTCCCGGGTAGAGTT tRNA-Arg-CCT-1-1 Sc: 55.7 >>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTGCGTGGCGAAAT.GGTtA.TCGCTTTTGACTTCTA...............................ATCAAAGG...........AtTCCGGGTTCGAATCCCGGCGTGGGTT tRNA-Arg-TCT-1-1 Sc: 67.6 GCCTGCGTGGCGAAAT.GGTtA.TCGCTTTTGACTTCTA...............................ATCAAAGG...........AtTCCGGGTTCGAATCCCGGCGTGGGTT tRNA-Arg-TCT-1-2 Sc: 67.6 GCCTGCGTGGCGAAAT.GGTtA.TCGCTTTTGACTTCTA...............................ATCAAAGG...........AtTCCGGGTTCGAATCCCGGCGTGGGTT tRNA-Arg-TCT-1-3 Sc: 67.6 GCCTGCGTGGCGAAAT.GGTtA.TCGCTTTTGACTTCTA...............................ATCAAAGG...........AtTCCGGGTTCGAATCCCGGCGTGGGTT tRNA-Arg-TCT-1-4 Sc: 67.6 GCCTGCGTGGCGAAAT.GGTtA.TCGCTTTTGACTTCTA...............................ATCAAAGG...........AtTCCGGGTTCGAATCCCGGCGTGGGTT tRNA-Arg-TCT-1-5 Sc: 67.6
Asn tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GACTGGGTGGCCAAGTTGGCtAAGGCGTGAGACTGTTAtttcaagaattttctacgac............ATCTCAAG...........AtCGAGAGTTCGAGCCTCTCCCTGGTCG tRNA-Asn-GTT-1-2 Sc: 63.8 GACTGGGTGGCCAAGTTGGCtAAGGCGTGAGACTGTTAttcggtaattacctaggtaataacttggc...ATCTCAAG...........AtCGAGAGTTCGAGCCTCTCCCTGGTCG tRNA-Asn-GTT-1-4 Sc: 63.5 GACTGGGTGGCCAAGTTGGCtAAGGCGTGAGACTGTTAtttaaggatttcatctagaatttcttctggc.ATCTCAAG...........AtCGAGAGTTCGAGCCTCTCCCTGGTCG tRNA-Asn-GTT-1-1 Sc: 63.4 GACTGGGTGGCCAAGTTGGCtAAGGCGTGAGACTGTTAccaagaaaacattttaccgtgttttcttcgacATCTCAAG...........AtCGAGAGTTCGAGCCTCTCCCTGGTCG tRNA-Asn-GTT-1-3 Sc: 63.4
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTCTTGTAGTTTAACGGTcA.GAATACGCGCTTGTCACGCGCGTG...........ATCGGGGTTCGATTCCCCGCAAGAGAG tRNA-Asp-GTC-1-1 Sc: 64.0 TCTCTTGTAGTTTAACGGTcA.GAATACGCGCTTGTCACGCGCGTG...........ATCGGGGTTCGATTCCCCGCAAGAGAG tRNA-Asp-GTC-1-2 Sc: 64.0 TCTCTTGTAGTTTAACGGTcA.GAATACGCGCTTGTCACGCGCGTG...........ATCGGGGTTCGATTCCCCGCAAGAGAG tRNA-Asp-GTC-1-3 Sc: 64.0 TCTCTTGTAGTTTAACGGTcA.GAATACGCGCTTGTCACGCGCGTG...........ATCGGGGTTCGATTCCCCGCAAGAGAG tRNA-Asp-GTC-1-4 Sc: 64.0 TCTCTTGTAGTTTAACGGTcA.GAATACGCGCTTGTCACGCGCGTG...........ATCGGGGTTCGATTCCCCGCAAGAGAG tRNA-Asp-GTC-1-5 Sc: 64.0
Cys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCTCATGGTCTAGTGGTtA.AGACAGTTGATTGCAAtaaaagcaattctattgtagtt...ATCAATTG...........GtCCCTGGTTCGAATCCGGGTGAGAGCT tRNA-Cys-GCA-2-1 Sc: 72.6 GCTCTTATGGTCTAGTGGTtA.AGACAGTTGATTGCAAtattttatctaaaatatctgtaattATCAATTG...........GtCCCTGGTTCGAATCCGGGTGAGAGCT tRNA-Cys-GCA-1-1 Sc: 70.2
Gln tRNAs
>>>>>>>..>>>............<<<.>>>>.......................<<<<...............>>>>>.......<<<<<<<<<<<<. GGTCCAATAGTGTAGT.GGCgA.TCACATCGGTTTCTGA..............TTCCGGTA...........ACCTGGGTTCGATTCCCAGTTGGACCT tRNA-Gln-CTG-1-1 Sc: 63.5 >>>>>>>..>>>............<<<.>>>>>.....................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTCCTATAGTGTAGTTGGTtA.TCACCCAAGGTTTTGActtcaaaacc....TCCTTGTA...........ACTCCGGTTCGAATCCGGATAGGACCT tRNA-Gln-TTG-1-3 Sc: 53.5 GGTCCTATAGTGTAGTTGGTtA.TCACCCAAGGTTTTGAttcatacgaaacc.TCCTTGTA...........ACTCCGGTTCGAATCCGGATAGGACCT tRNA-Gln-TTG-1-1 Sc: 53.4 GGTCCTATAGTGTAGTTGGTtA.TCACCCAAGGTTTTGAtttaagcaaaact.TCCTTGTA...........ACTCCGGTTCGAATCCGGATAGGACCT tRNA-Gln-TTG-1-2 Sc: 53.4 GGTCCTATAGTGTAGTTGGTtA.TCACCCAAGGTTTTGAtttgattaaaaaccTCCTTGTA...........ACTTCGGTTCGAATCCGGATAGGACCT tRNA-Gln-TTG-2-1 Sc: 50.0
Glu tRNAs
>>>>>>>..>>>...........<<<.>>>>>................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGATATAGTGTAATGGCtA.TCACACGACACTCTCC.........................ATGTTGTG...........ATCCGGGTTCGATTCCCGGTATCGGAG tRNA-Glu-CTC-1-1 Sc: 57.9 >>>>>>>..>>>...........<<<.>>>>>................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGATGTAGTGTAGTGGCtA.TCACGGTTCGCTTTCAtttctttcttagaaacagagcg...CCGAGCAA...........ACCGGGGTTCGATTCCCCGCATTGGAG tRNA-Glu-TTC-1-1 Sc: 49.4 TCCGATGTAGTGTAGTGGCtA.TCACGGTTCGCTTTCAtttctttcttaggaacagagcg...CCGAGCAA...........ACCGGGGTTCGATTCCCCGCATTGGAG tRNA-Glu-TTC-1-2 Sc: 49.4 TCCGATGTAGTGTAGTGGCtA.TCACGGTTCGCTTTCAttttcttcttagaaacagagcg...CCGAGCAA...........ACCGGGGTTCGATTCCCCGCATTGGAG tRNA-Glu-TTC-1-4 Sc: 49.4 TCCGATGTAGTGTAGTGGCtA.TCACGGTTCGCTTTCAtttctttcgtaggaacagagcg...CCGAGCAA...........ACCGGGGTTCGATTCCCCGCATTGGAG tRNA-Glu-TTC-1-5 Sc: 49.4 TCCGATGTAGTGTAGTGGCtA.TCACGGTTCGCTTTCAtttctttcttaggagcagagcg...CCGAGCAA...........ACCGGGGTTCGATTCCCCGCATTGGAG tRNA-Glu-TTC-1-6 Sc: 49.4 TCCGATGTAGTGTAGTGGCtA.TCACGGTTCGCTTTCAtttctttcttagggacagagcg...CCGAGCAA...........ACCGGGGTTCGATTCCCCGCATTGGAG tRNA-Glu-TTC-1-7 Sc: 49.4 TCCGATGTAGTGTAGTGGCtA.TCACGGTTCGCTTTCAtttcagacctttctggaacagagcgCCGAGCAA...........ACCGGGGTTCGATTCCCCGCATTGGAG tRNA-Glu-TTC-1-3 Sc: 49.3
Gly tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCAAGAATGGTTTAGTGGTA.AAATCCAACGTTGCCATCGTTGGG...........CCCCGGGTTCGATTCCCGGTTCTTGCA tRNA-Gly-GCC-1-1 Sc: 63.6 GCAAGAATGGTTTAGTGGTA.AAATCCAACGTTGCCATCGTTGGG...........CCCCGGGTTCGATTCCCGGTTCTTGCA tRNA-Gly-GCC-1-2 Sc: 63.6 GCAAGAATGGTTTAGTGGTA.AAATCCAACGTTGCCATCGTTGGG...........CCCCGGGTTCGATTCCCGGTTCTTGCA tRNA-Gly-GCC-1-3 Sc: 63.6 GCAAGAATGGTTTAGTGGTA.AAATCCAACGTTGCCATCGTTGGG...........CCCCGGGTTCGATTCCCGGTTCTTGCA tRNA-Gly-GCC-1-4 Sc: 63.6 GCAAGAATGGTTTAGTGGTA.AAATCCAACGTTGCCATCGTTGGG...........CCCCGGGTTCGATTCCCGGTTCTTGCA tRNA-Gly-GCC-1-5 Sc: 63.6 GCAAGAATGGTTTAGTGGTA.AAATCCAACGTTGCCATCGTTGGG...........CCCCGGGTTCGATTCCCGGTTCTTGCA tRNA-Gly-GCC-1-6 Sc: 63.6 GCAAGAATGGTTTAGTGGTA.AAATCCAACGTTGCCATCGTTGGG...........CCCCGGGTTCGATTCCCGGTTCTTGCA tRNA-Gly-GCC-1-7 Sc: 63.6 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. ACGTCAGTGGTTTAAGGGTA.AAATTCTTGCTTCCCAAGCAAGGG...........CTCCGGGTTCGAGTCCCGGCTGGCGTA tRNA-Gly-CCC-1-1 Sc: 60.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGACGGTTGATGTAGTGGTA.ACATATGAGCCTTCCAAGCTCAAT...........ACACGGGTTCGATTCCCGTACCGTTCA tRNA-Gly-TCC-1-1 Sc: 67.3 GGACGGTTGATGTAGTGGTA.ACATATGAGCCTTCCAAGCTCAAT...........ACACGGGTTCGATTCCCGTACCGTTCA tRNA-Gly-TCC-1-2 Sc: 67.3
His tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCCATCATAGTATAGTGGTcA.TTATAAATCGTTGTGGtgtaaaacactacaaatgcaaac...CCGATTAG...........ACCCAAGTTCGATTCTTGGTGATGGCA tRNA-His-GTG-1-3 Sc: 54.4 GCCATCATAGTATAGTGGTcA.TTATAAATCGTTGTGGtgttttaagcactgcgaactacaatcCCGATTAG...........ACCCAAGTTCGATTCTTGGTGATGGCA tRNA-His-GTG-1-1 Sc: 54.3 GCCATCATAGTATAGTGGTcA.TTATAAATCGTTGTGGtgtttcaagcactgcgaactacaatcCCGATTAG...........ACCCAAGTTCGATTCTTGGTGATGGCA tRNA-His-GTG-1-2 Sc: 54.3
Ile tRNAs
>>>>>>>..>>>............<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCCTTGGCCCAGTTGGTtA.AGGCGTGGTGCTAATAagtacaatttgtt......................ACGCCAAG...........AtCAGCAGTTCGATCCTGCTAGGGACCA tRNA-Ile-AAT-1-1 Sc: 64.1 GGTCCCTTGGCCCAGTTGGTtA.AGGCGTGGTGCTAATAaattcaatttgtt......................ACGCCAAG...........AtCAGCAGTTCGATCCTGCTAGGGACCA tRNA-Ile-AAT-1-2 Sc: 64.1 GGTCCCTTGGCCCAGTTGGTtA.AGGCGTGGTGCTAATAaatttaatttgtt......................ACGCCAAG...........AtCAGCAGTTCGATCCTGCTAGGGACCA tRNA-Ile-AAT-1-3 Sc: 64.1 GGTCCCTTGGCCCAGTTGGTtA.AGGCGTGGTGCTAATAagtttaatttgtt......................ACGCCAAG...........AtCAGCAGTTCGATCCTGCTAGGGACCA tRNA-Ile-AAT-1-4 Sc: 64.1 GGTCCCTTGGCCCAGTTGGTtA.AGGCGTGGTGCTAATAaatacaatttgtt......................ACGCCAAG...........AtCAGCAGTTCGATCCTGCTAGGGACCA tRNA-Ile-AAT-1-5 Sc: 64.1 GGTCCCTTGGCCCAGTTGGTtA.AGGCGTGGTGCTAATAactcagtttgtt.......................ACGCCAAG...........AtCAGCAGTTCGATCCTGCTAGGGACCA tRNA-Ile-AAT-1-6 Sc: 64.1 >>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<................>.>>>.......<<<.<<<<<<<<. GCTCCAGTGGCGCAGA.GGTtA.GCGCTTCGTGCTTATAgaattattcactatgccaaacgcacagtcgttgagACGCGACG...........GtCGTGGGTTCAAACCCCTCCTGGAGCA tRNA-Ile-TAT-1-1 Sc: 63.7
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>.............................................<<<<<.>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GACTGGATGGCCGAGC.GGTc.A.AGGCGCCAGGGTAAGGcggcggtaaatcttatcgcgtaacgtttaccacaacaaTCCTGGTCTAC.GAAA......GTGGGCGCGAGTTCGAATCTCGT.TTCAGTCA tRNA-Leu-AAG-1-1 Sc: 54.9 GACTGGATGGCCGAGC.GGTc.A.AGGCGCCAGGGTAAGGcggcgataaatcttatcgcgtaacgtttaccataacaaTCCTGGTCTAC.GAAA......GTGGGCGCGAGTTCGAATCTCGT.TTCAGTCA tRNA-Leu-AAG-1-2 Sc: 54.9 >>>>>>>..>>>.............<<<.>>>>>.............................................<<<<<.>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GATACGATGGCCGAGT.GGTt.A.AGGCGAAGGATGCAGG......................................TTCCTTTGGGC.ATT.......GCCCGCGCAGGTTCGAACCCTGC.TCGTGTCG tRNA-Leu-CAG-1-1 Sc: 68.9 >>>>>>>..>>>.............<<<.>>>>>.............................................<<<<<.>>>.>.........<.<<<..>>>>>.......<<<<<.<<<<<<<. GGCACTATGGCCGAGTTGGTctA.AGGCGGTAGACTCAAGatttattcttctcctgcgaaccaggggt..........TTCTACTATCGT.........AAGATGCAGGAGTTCGAATCTCCT.TGGTGTCA tRNA-Leu-CAA-1-3 Sc: 58.7 GGCACTATGGCCGAGTTGGTctA.AGGCGGTAGACTCAAGaattattcttctcctgcgatccaggggt..........TTCTACTATCGT.........AAGATGCAGGAGTTCGAATCTCCT.TGGTGTCA tRNA-Leu-CAA-1-5 Sc: 58.7 GGCACTATGGCCGAGTTGGTctA.AGGCGGTAGACTCAAGaattcatttcttcttctgtgtaaacaggggtt......TTCTACTATCGT.........AAGATGCAGGAGTTCGAATCTCCT.TGGTGTCA tRNA-Leu-CAA-1-4 Sc: 58.6 GGCACTATGGCCGAGTTGGTctA.AGGCGGTAGACTCAAGaattaacaaaaattcttcttctgttctaacaggggt..TTCTACTATCGT.........AAGATGCAGGAGTTCGAATCTCCT.TGGTGTCA tRNA-Leu-CAA-1-1 Sc: 58.4 GGCACTATGGCCGAGTTGGTctA.AGGCGGTAGACTCAAGaattgacaatgattcttcttctgttctaacaggggt..TTCTACTATCGT.........AAGATGCAGGAGTTCGAATCTCCT.TGGTGTCA tRNA-Leu-CAA-1-2 Sc: 58.4 GGCATTGTGGCCGAGTTGGTctA.AGGCGGTAGACTCAAGaattcttttcttcttctgtgtaaacaggggtt......TTCTACTATCGT.........AAGATGCAGGAGTTCGAATCTCCT.TGATGTCA tRNA-Leu-CAA-2-1 Sc: 55.8 >>>>>>>..>>>.............<<<.>>>>>.............................................<<<<<.>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GGAGGGTTGACCGAGTTGGTctA.AGGTGACAGACTTAAGgtgaaggttcaaatccttctttaccagagta.......ATCTGTTGGTC.AGTT......GACCGCGCGAGTTCGAATCTCGC.ACCCTTCA tRNA-Leu-TAA-1-1 Sc: 64.1 GGAGGGTTGACCGAGTTGGTctA.AGGTGACAGACTTAAGgtgaaggttcaaatccttctttaccagagga.......ATCTGTTGGTC.AGTT......GACCGCGCGAGTTCGAATCTCGC.ACCCTTCA tRNA-Leu-TAA-1-2 Sc: 64.1 GGAGGGTTGACCGAGTTGGTctA.AGGTGACAGACTTAAGgtgaaggttcaaatccttctttaccagagta.......ATCTGTTGGTC.AGTT......GACCGCGCGAGTTCGAATCTCGC.ACCCTTCA tRNA-Leu-TAA-1-3 Sc: 64.1 GGAGGGTTGACCGAGTTGGTctA.AGGTGACAGACTTAAGgtgaaggttcaaatccttctttaccagagta.......ATCTGTTGGTC.AGTT......GACCGCGCGAGTTCGAATCTCGC.ACCCTTCA tRNA-Leu-TAA-1-4 Sc: 64.1 GGAGGGTTGACCGAGTTGGTctA.AGGTGACAGACTTAAGgtgaaggttcaaatccgtctttgccagagta.......ATCTGTTGGTC.AGTT......GACCGCGCGAGTTCGAATCTCGC.ATCCTTCA tRNA-Leu-TAA-2-1 Sc: 63.1
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTGGCTAGCTCAATCGGT..AGAGCATTTGACTCTTAgcaataaaagtc.....ATCAAAAG...........GtTGCGGGTTCGAGCCCCGCGTTGGGCT tRNA-Lys-CTT-1-2 Sc: 77.3 GCCTGGCTAGCTCAATCGGT..AGAGCATTTGACTCTTAaagaactactagtc...ATCAAAAG...........GtTGCGGGTTCGAGCCCCGCGTTGGGCT tRNA-Lys-CTT-1-3 Sc: 77.2 GCCTGGCTAGCTCAATCGGT..AGAGCATTTGACTCTTAgaattatttccaaagtcATCAAAAG...........GtTGCGGGTTCGAGCCCCGCGTTGGGCT tRNA-Lys-CTT-1-1 Sc: 77.1 >>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTAGCTAGCTCAATCGGCttAGAGCGTGAGACTTTTA.................ATCTCAAG...........GtTGCGGGTTCGAGTCCCGCGTTGGGCT tRNA-Lys-TTT-1-1 Sc: 79.4 GCCTAGCTAGCTCAATCGGCttAGAGCGTGAGACTTTTA.................ATCTCAAG...........GtTGCGGGTTCGAGTCCCGCGTTGGGCT tRNA-Lys-TTT-1-3 Sc: 79.4 GCCTAGCTAGCTCAATCGGCttAGAGCGTGAGACTTTTAttacaagagtg......ATCTCAAG...........GtTGCGGGTTCGAGTCCCGCGTTGGGCT tRNA-Lys-TTT-1-2 Sc: 72.1
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCGGTGGCTTAGTTGGTtA.AAGCGTAAGTCTCATAATCTTAAG...........GtCGCGAGTTCGACCCTCGCCCGAAGCA tRNA-Met-CAT-1-1 Sc: 80.9 GCTTCGGTGGCTTAGTTGGTtA.AAGCGTAAGTCTCATAATCTTAAG...........GtCGCGAGTTCGACCCTCGCCCGAAGCA tRNA-Met-CAT-1-2 Sc: 80.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. AGCATTGTGACGCAGT.GGA.A.GCGTGCGAGGCTCATAACCTCGAA...........GtCCCTGGATCGAAACCAGGCAATGCTA tRNA-iMet-CAT-1-1 Sc: 61.0 AGCATTGTGACGCAGT.GGA.A.GCGTGCGAGGCTCATAACCTCGAA...........GtCCCTGGATCGAAACCAGGCAATGCTA tRNA-iMet-CAT-1-2 Sc: 61.0
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCAGCTTTAGCTCATCTGGGAGAGCGTCAGACTGAAGaatttctaacctgaaATCTGGAG...........GtACTGTGTTCGAGCCACAGAAGCTGCA tRNA-Phe-GAA-1-1 Sc: 54.9 GCAGCTTTAGCTCATCTGGGAGAGCGTCAGACTGAAGaatttcaaacctgaaATCTGGAG...........GtACTGTGTTCGAGCCACAGAAGCTGCA tRNA-Phe-GAA-1-2 Sc: 54.9 GCAGCTTTAGCTCATCTGGGAGAGCGTCAGACTGAAGaatttcaaacctgaaATCTGGAG...........GtACTGTGTTCGAGCCACAGAAGCTGCA tRNA-Phe-GAA-1-3 Sc: 54.9 GCAGCTTTAGCTCATCTGGGAGAGCGTCAGACTGAAGaatttcaaacctgaaATCTGGAG...........GtACTGTGTTCGAGCCACAGAAGCTGCA tRNA-Phe-GAA-1-4 Sc: 54.9 GCAGCTTTAGCTCATCTGGGAGAGCGTCAGACTGAAGtatttcaaacctgaaATCTGGAG...........GtACTGTGTTCGAGCCACAGAAGCTGCA tRNA-Phe-GAA-1-5 Sc: 54.9
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>.>>>.............................................<<<.<................>>>>>.......<<<<<<<<<<<<. GGGTCAATGGTGAAGTGGCgA.TCATGCTCCATTAGGGattttactactgttcttgtaactgtgtgaaatctgaatTTGGTGTG...........GtCCCGGGTTCGATTCCCGGTTGACCCC tRNA-Pro-AGG-1-1 Sc: 43.5 >>>>>>>..>>>...........<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGAATGGTCTAGTGGT.A.TGATTCCTCGTTTGGGtacatttcaaacacaagtt...................TCGAGGAG...........GtCCGGGGTTCAATTCCCCGTTTGCCCC tRNA-Pro-TGG-1-1 Sc: 58.3 GGGCGAATGGTCTAGTGGT.A.TGATTCCTCGTTTGGGttttcaccgaacataaaat...................TCGAGGAG...........GtCCGGGGTTCAATTCCCCGTTTGCCCC tRNA-Pro-TGG-1-2 Sc: 58.3 GGGCGAATGGTCTAGTGGT.A.TGATTCCTCGTTTGGGtttgttaccaaacataaaat..................TCGAGGAG...........GcCCGGGGTTCAATTCCCCGTTTGCCCC tRNA-Pro-TGG-2-1 Sc: 58.3 GGGCGAATGGTCTAGTGGT.A.TGATTCCTCGTTTGGGttgttcaccaaacacaaaat..................TCGAGGAG...........GcCCGGGGTTCAATTCCCCGTTTGCCCC tRNA-Pro-TGG-2-2 Sc: 58.3 GGGCGAATGGTCTAGTGGT.A.TGATTCCTCGTTTGGGtttgtttccgaacattaaaat.................TCGAGGAG...........GcCCGGGGTTCAATTCCCCGTTTGCCCC tRNA-Pro-TGG-2-3 Sc: 58.3
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>...........<<<.>>>>>.........................................<<<<<..>>>>.......<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAACTTGTCCGAGTGGTtA.AGGAGAAAGATTAGAA..................................ATCTTTT.GGGCTTT....GCCCG.CGCAGGTTCGAGTCCTGC.AGTTGTCG tRNA-Ser-AGA-1-1 Sc: 77.2 GGCAACTTGTCCGAGTGGTtA.AGGAGAAAGATTAGAA..................................ATCTTTT.GGGCTTT....GCCCG.CGCAGGTTCGAGTCCTGC.AGTTGTCG tRNA-Ser-AGA-1-2 Sc: 77.2 GGCAACTTGTCCGAGTGGTtA.AGGAGAAAGATTAGAA..................................ATCTTTT.GGGCTTT....GCCCG.CGCAGGTTCGAGTCCTGC.AGTTGTCG tRNA-Ser-AGA-1-3 Sc: 77.2 GGCAACTTGTCCGAGTGGTtA.AGGAGAAAGATTAGAA..................................ATCTTTT.GGGTTTT....GCCCG.CGCAGGTTCGAGTCCTGC.AGTTGTCG tRNA-Ser-AGA-2-1 Sc: 74.4 >>>>>>>..>>>...........<<<..>>>>.........................................<<<<...>>>>.......<<<<...>>>>>.......<<<<<.<<<<<<<. GACAGTGTGGCCGAGCGGTtA.AGGCGTCTGACTCGAAtcttattcgcgtt.....................ATCAGTT.GGGCTTT....GCCCG.CGCAGGTTCGAATCCTGC.TGCTGTCG tRNA-Ser-CGA-1-1 Sc: 69.3 >>>>>>>..>>>...........<<<.>>>>>.........................................<<<<<..>>>>.......<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAACTTGTCCGAGCGGTtA.AGGAGAAAGACTTGAA..................................ATCTTTT.GGGCTTT....GCCCG.CGCAGGTTCGAGTCCTGC.AGTTGTCG tRNA-Ser-TGA-1-1 Sc: 76.7 GGCAACTTGTCCGAGCGGTtA.AGGAGAAAGACTTGAA..................................ATCTTTT.GGGCTTT....GCCCG.CGCAGGTTCGAGTCCTGC.AGTTGTCG tRNA-Ser-TGA-1-2 Sc: 76.7 GGCAACTTGTCCGAGCGGTtA.AGGAGAAAGACTTGAA..................................ATCTTTT.GGGCTTT....GCCCG.CGCAGGTTCGAGTCCTGC.AGTTGTCG tRNA-Ser-TGA-1-3 Sc: 76.7 >>>>>>>..>>>...........<<<.>>>>>.........................................<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<. GTCATGATGTCCGAGTGGTtA.AGGAGTTGCCCTGCTAtattcccgatttcagtcaggaaagcagtttgtt.AGGCAATGGGC.TCT.....GCCTtCGCAGGTTCGAATCCTGT.TCATGACG tRNA-Ser-GCT-1-1 Sc: 65.3 GTCATGATGTCCGAGTGGTtA.AGGAGTTGCCCTGCTAtagttctaattttacttggaaaagcagttttgtcAGGCAATGGGC.TCT.....GCTTtCGCAGGTTCGAATCCTGT.TCATGACG tRNA-Ser-GCT-2-1 Sc: 60.4
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCTTATGGCCAAGTTGGTA.AGGCACCTCACTAGTA................ATGAGGAG...........AtCGTAGGTTCGAATCCTGCTGAGAGCA tRNA-Thr-AGT-1-1 Sc: 76.5 GCTCTTATGGCCAAGTTGGTA.AGGCACCTCACTAGTA................ATGAGGAG...........AtCGTAGGTTCGAATCCTGCTGAGAGCA tRNA-Thr-AGT-1-2 Sc: 76.5 GCTCTTATGGCCAAGTTGGTA.AGGCACCTCACTAGTA................ATGAGGAG...........AtCGTAGGTTCGAATCCTGCTGAGAGCA tRNA-Thr-AGT-1-3 Sc: 76.5 GCTCTTATGGCCAAGTTGGTA.AGGCACCTCACTAGTA................ATGAGGAG...........AtCGTAGGTTCGAATCCTGCTGAGAGCA tRNA-Thr-AGT-1-4 Sc: 76.5 >>>>>>>..>>>...........<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTACTTGGCCAAGT.GGTA.AGGCACTCCACTCGTAtaatttatttccagtgATGGAGCG...........AtCGTCGGTTCAATCCCGACAGTGGGCA tRNA-Thr-CGT-1-1 Sc: 66.8 >>>>>>>..>>>>.........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTTTTAGCTTAGT.GGTA.GAGCGTTGCACTTGTA................ATGCAAAG...........GtCGCTAGTTCAATTCTGGCAAGAGGCA tRNA-Thr-TGT-1-1 Sc: 80.8 GCCTTTTTAGCTTAGT.GGTA.GAGCGTTGCACTTGTA................ATGCAAAG...........GtCGCTAGTTCAATTCTGGCAAGAGGCA tRNA-Thr-TGT-1-2 Sc: 80.8
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<<<<<<<<<. GGAGCTGTAGCTCAGTTGGCAGAGTATCGGATTCCAAtagaggaattctcggttgtaaac.ATCCGACG...........GtCGCAGGTTCAAATCCTGTCAGCTTCA tRNA-Trp-CCA-1-1 Sc: 65.7 GGAGCTGTAGCTCAGTTGGCAGAGTATCGGATTCCAAtaagaggaattctcggttgtaaacATCCGACG...........GtCGCAGGTTCAAATCCTGTCAGCTTCA tRNA-Trp-CCA-1-2 Sc: 65.7
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..................................................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCTCGATAGCTTAGTTGGTAAAGCATTAGACTGTAActgttcattctggatattgat......................ATCTAAGG...........AtCGGGTGTTCGACTCACCCTCGGGAGA tRNA-Tyr-GTA-1-1 Sc: 63.8 CTCTCGGTAGCTTAGTTGGTAAAGCATTAGACTGTAActgagttattgtttgcaatcaaacaattggaatgcg.......ATCTAAGG...........AtCGGGTGTTCGACTCACTCCCGGGAGA tRNA-Tyr-GTA-2-3 Sc: 59.7 CTCTCGGTAGCTTAGTTGGTAAAGCATTAGACTGTAActgattaataccgctgttccaaagaacagttccttaattgcg.ATCTAAGG...........AtCGGGTGTTCGACTCACTCCCGGGAGA tRNA-Tyr-GTA-2-1 Sc: 59.5 CTCTCGGTAGCTTAGTTGGTAAAGCATTAGACTGTAActgattaacaaccgctgttccaaagaacagttccttaattgcgATCTAAGG...........AtCGGGTGTTCGACTCACTCCCGGGAGA tRNA-Tyr-GTA-2-2 Sc: 59.5
Val tRNAs
>>>>>>>..>>>.............<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCGTGGTCTAGTTGGTt.A.TGGCATATGCTTAACA......................CGCATAAC...........GtCCCCAGTTCGATCCTGGGCGGAATCA tRNA-Val-AAC-1-1 Sc: 67.0 GGTTCCGTGGTCTAGTTGGTt.A.TGGCATATGCTTAACA......................CGCATAAC...........GtCCCCAGTTCGATCCTGGGCGGAATCA tRNA-Val-AAC-1-2 Sc: 67.0 GGTTCCGTGGTCTAGTTGGTt.A.TGGCATATGCTTAACA......................CGCATAAC...........GtCCCCAGTTCGATCCTGGGCGGAATCA tRNA-Val-AAC-1-3 Sc: 67.0 GGTTCCGTGGTCTAGTTGGTt.A.TGGCATATGCTTAACA......................CGCATAAC...........GtCCCCAGTTCGATCCTGGGCGGAATCA tRNA-Val-AAC-1-4 Sc: 67.0 GGTTCCGTGGTCTAGTTGGTt.A.TGGCATATGCTTAACA......................CGCATAAC...........GtCCCCAGTTCGATCCTGGGCGGAATCA tRNA-Val-AAC-1-5 Sc: 67.0 GGTTTCGTGGTCTAGTTGGTt.A.TGGCATATGCTTAACA......................CGCATAAC...........GtCCCCAGTTCGATCCTGGGCGAAATCA tRNA-Val-AAC-2-1 Sc: 66.8 >>>>>>>..>>>.............<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTTAGTGGTGTAGC.GGT..A.TCACGTTTCCTTCACA......................CGGAAAAG...........GtCTCGAGTTCGATCCTCGGCTAGATCA tRNA-Val-CAC-1-1 Sc: 65.7 >>>>>>>..>>>.............<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTGAGTAGTGTAGC.GGCctA.TCACGTTTCGTTTACAtttccagcaatggatgtaagtcCCGAAAAG...........GtCCCGAGTTCGATCCTCGGCTCGATCA tRNA-Val-TAC-1-1 Sc: 58.3