tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 129
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 0
Total tRNAs 129
Intron Summary (tRNAs with introns: 71)
Pro AGG
1
Pro TGG
5
Thr CGT
1
Val TAC
1
Ser CGA
1
Ser GCT
2
Arg ACG
2
Arg CCG
2
Arg CCT
1
Leu AAG
2
Leu CAA
6
Leu TAA
5
Phe GAA
5
Asn GTT
4
Lys CTT
3
Lys TTT
1
Glu TTC
7
His GTG
3
Gln TTG
4
Ile AAT
6
Ile TAT
1
Tyr GTA
4
Cys GCA
2
Trp CCA
2

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 3637

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
7
GGC
 
CGC
 
TGC
2
9
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
7
CCC
1
TCC
2
10
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
1
GGG
 
CGG
 
TGG
5
6
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
4
GGT
 
CGT
1
TGT
2
7
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
6
GAC
 
CAC
1
TAC
1
8
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
4
GGA
 
CGA
1
TGA
3
ACT
 
GCT
2
 
 
 
 
10
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
2
GCG
 
CCG
2
TCG
 
 
 
 
 
CCT
1
TCT
5
10
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
2
GAG
 
CAG
1
TAG
 
 
 
 
 
CAA
6
TAA
5
14
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
5
 
 
 
 
5
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
4
 
 
 
 
4
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
3
TTT
3
6
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
5
 
 
 
 
5
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
1
TTC
7
8
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
3
 
 
 
 
3
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
1
TTG
4
5
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
6
GAT
 
 
 
TAT
1
7
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
2/2
 
 
4
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
4
 
 
 
 
4
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
2
 
 
 
 
2
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
2
 
 
2
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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