tRNA Gene Summary

Overview
High confidence set 690
tRNAs decoding standard 20 AA 689
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 25
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 81
Secondary filter (low feature scores, possible rep. element) 50

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 33)
Leu CAA
10
Ile TAT
5
Tyr GTA
18
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
29
GGC
 
CGC
6
TGC
13
48
GlyACC
 
GCC
18
CCC
 
TCC
42
60
ProAGG
5
GGG
 
CGG
4
TGG
37
46
ThrAGT
22
GGT
 
CGT
9
TGT
10
41
ValAAC
24
GAC
 
CAC
6
TAC
6
36
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
16
GGA
 
CGA
7
TGA
8
ACT
 
GCT
8
 
 
 
 
39
ArgACG
21
GCG
 
CCG
 
TCG
11
 
 
 
 
CCT
2
TCT
9
43
LeuAAG
27
GAG
 
CAG
7
TAG
5
 
 
 
 
CAA
10
TAA
4
53
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
22
 
 
 
 
22
AsnATT
 
GTT
22
 
 
 
 
22
Lys 
 
 
 
CTT
34
TTT
14
48
AspATC
 
GTC
32
 
 
 
 
32
Glu 
 
 
 
CTC
30
TTC
19
49
HisATG
 
GTG
20
 
 
 
 
20
Gln 
 
 
 
CTG
10
TTG
25
35
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
20
GAT
 
CAT
 
TAT
5
25
iMet/Met 
 
 
 
CAT
10/13
 
 
23
TyrATA
 
GTA
18
 
 
 
 
18
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
16
 
 
 
 
16
Trp 
 
 
 
CCA
13
 
 
13
SelCys 
 
 
 
 
 
TCA
1
1