tRNA Gene Summary

Overview
High confidence set 568
tRNAs decoding standard 20 AA 567
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 13
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 103
Secondary filter (low feature scores, possible rep. element) 37

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 39)
Ala AGC
1
Pro AGG
1
Thr TGT
3
Leu AAG
1
Leu CAA
7
Phe GAA
1
His GTG
1
Ile TAT
3
Tyr ATA
1
Tyr GTA
19
Cys ACA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
24
GGC
1
CGC
5
TGC
9
39
GlyACC
2
GCC
18
CCC
4
TCC
37
61
ProAGG
7
GGG
6
CGG
4
TGG
35
52
ThrAGT
17
GGT
3
CGT
8
TGT
13
41
ValAAC
20
GAC
1
CAC
6
TAC
5
32
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
19
GGA
1
CGA
13
TGA
9
ACT
 
GCT
10
 
 
 
 
52
ArgACG
19
GCG
1
CCG
2
TCG
13
 
 
 
 
CCT
5
TCT
8
48
LeuAAG
20
GAG
2
CAG
6
TAG
4
 
 
 
 
CAA
7
TAA
4
43
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
17
 
 
 
 
17
AsnATT
 
GTT
21
 
 
 
 
21
Lys 
 
 
 
CTT
65
TTT
15
80
AspATC
2
GTC
28
 
 
 
 
30
Glu 
 
 
 
CTC
25
TTC
17
42
HisATG
6
GTG
20
 
 
 
 
26
Gln 
 
 
 
CTG
7
TTG
25
32
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
22
GAT
 
CAT
 
TAT
7
29
iMet/Met 
 
 
 
CAT
9/11
 
 
20
TyrATA
1
GTA
19
 
 
 
 
20
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
1
GCA
13
 
 
 
 
14
Trp 
 
 
 
CCA
12
 
 
12
SelCys 
 
 
 
 
 
TCA
1
1