tRNA Gene Summary

Overview
High confidence set 384
tRNAs decoding standard 20 AA 383
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 4
Unexpected anticodons 1
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 86
Secondary filter (low feature scores, possible rep. element) 82

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 21)
Arg TCT
4
Leu CAA
5
Ile TAT
4
Tyr GTA
8
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
15
GGC
 
CGC
4
TGC
7
26
GlyACC
 
GCC
9
CCC
2
TCC
6
17
ProAGG
9
GGG
 
CGG
3
TGG
6
18
ThrAGT
11
GGT
 
CGT
4
TGT
6
21
ValAAC
11
GAC
 
CAC
8
TAC
6
25
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
6
GGA
 
CGA
4
TGA
4
ACT
 
GCT
10
 
 
 
 
24
ArgACG
7
GCG
 
CCG
4
TCG
4
 
 
 
 
CCT
5
TCT
5
25
LeuAAG
6
GAG
 
CAG
4
TAG
4
 
 
 
 
CAA
5
TAA
4
23
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
9
 
 
 
 
9
AsnATT
 
GTT
16
 
 
 
 
16
Lys 
 
 
 
CTT
40
TTT
12
52
AspATC
 
GTC
7
 
 
 
 
7
Glu 
 
 
 
CTC
5
TTC
10
15
HisATG
 
GTG
8
 
 
 
 
8
Gln 
 
 
 
CTG
9
TTG
6
15
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
10
GAT
1
CAT
 
TAT
4
15
iMet/Met 
 
 
 
CAT
8/6
 
 
14
TyrATA
 
GTA
8
 
 
 
 
8
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
38
 
 
 
 
38
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
1
1