tRNA Gene Summary

Overview
High confidence set 384
tRNAs decoding standard 20 AA 383
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 4
Unexpected anticodons 1
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 86
Secondary filter (low feature scores, possible rep. element) 82

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 31)
Gly GCC
1
Pro TGG
2
Thr GGT
1
Ser GGA
1
Arg TCT
4
Leu TAG
1
Leu CAA
5
Phe GAA
1
Lys TTT
1
Ile TAT
5
Tyr GTA
9
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
18
GGC
 
CGC
4
TGC
10
32
GlyACC
 
GCC
13
CCC
10
TCC
7
30
ProAGG
9
GGG
2
CGG
3
TGG
9
23
ThrAGT
11
GGT
2
CGT
4
TGT
8
25
ValAAC
14
GAC
 
CAC
10
TAC
7
31
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
8
GGA
2
CGA
4
TGA
5
ACT
2
GCT
11
 
 
 
 
32
ArgACG
8
GCG
1
CCG
4
TCG
4
 
 
 
 
CCT
11
TCT
5
33
LeuAAG
9
GAG
1
CAG
4
TAG
8
 
 
 
 
CAA
8
TAA
5
35
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
1
GAA
14
 
 
 
 
15
AsnATT
 
GTT
24
 
 
 
 
24
Lys 
 
 
 
CTT
66
TTT
17
83
AspATC
2
GTC
9
 
 
 
 
11
Glu 
 
 
 
CTC
7
TTC
12
19
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
14
TTG
9
23
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
14
GAT
5
CAT
 
TAT
7
26
iMet/Met 
 
 
 
CAT
13/9
 
 
22
TyrATA
 
GTA
13
 
 
 
 
13
Supres 
 
TCA
 
CTA
2
TTA
2
4
CysACA
1
GCA
46
 
 
 
 
47
Trp 
 
 
 
CCA
11
 
 
11
SelCys 
 
 
 
 
 
TCA
1
1